ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl18g07 |
|---|---|
| Clone Library Name | barley_pub |
>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1615 Score = 34.3 bits (77), Expect = 0.075 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +1 Query: 91 RTKAAKH---PSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 RT + H P G+ + T T R G P +SPPAD+ GS R PQ+P Sbjct: 1146 RTLCSMHHLAPGGSAPPSPLLLTRTHRQGSPT-QSPPADTSFGSRRGRQLPQVP 1198
>LTBP2_RAT (O35806) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1764 Score = 32.3 bits (72), Expect = 0.29 Identities = 21/65 (32%), Positives = 25/65 (38%) Frame = +1 Query: 61 QPGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQI 240 QPG A+ PS A + + R P G+ PPA S A PQ Sbjct: 89 QPGQGIPGRLAEAEARRPSRAQQLRRVQSPVQTRRSNPRGQQPPAARTAHSVVRLATPQR 148 Query: 241 PAARR 255 PAA R Sbjct: 149 PAAAR 153
>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) (Androgen r Length = 2696 Score = 30.8 bits (68), Expect = 0.83 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 154 TGRAGGPEGRSPPADSPIGSADPRAHPQIPAA 249 T + P RS P + P+G+ADPR I AA Sbjct: 2337 TSPSSSPSVRSQPLERPLGTADPRLDKSIGAA 2368
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRA 228 P G E+ + +G + GP+ S P +P+ ADP+A Sbjct: 123 PLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQA 161
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 94 TKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRA--HPQIPAARRDD 261 T AA S + ++ ++ ++ + SPP SP S+ PR P +PAA D Sbjct: 81 TTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAAAFSD 138
>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)| (EBNA-6) (EBNA-3C) (EBNA-4B) Length = 992 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAG----GPEGRSPPADSPIGSADPRAHPQIPA 246 R K A P+ +P +T AG GP PPA P + P A P+I A Sbjct: 545 RQKRAAPPTVSPSDTGPPAVGPPAAGPPAAGPPAAGPPAAGPPAAGPPAAGPRILA 600
>CLCN1_CANFA (Q9MZT1) Chloride channel protein, skeletal muscle (Chloride channel| protein 1) (ClC-1) Length = 976 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/53 (30%), Positives = 21/53 (39%) Frame = +1 Query: 46 SAIQIQPGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSP 204 S +Q++P T K+P G P T+ G P PPA SP Sbjct: 871 SGVQLRPPLASFRST-TSTRKNPGGPPPPTEAWSLPEDGTGAPASPEPPAPSP 922
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 172 PEGRSPPADSPIGSADPRAHPQIPA 246 P G +PP +P SA PR P +PA Sbjct: 86 PPGLAPPQKAPAASAPPRKAPAVPA 110
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +1 Query: 118 GAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIPAARRD 258 G P+ +K + G G + P DSP G P HP+ +A ++ Sbjct: 6999 GHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQE 7045
>ATI2_HHV1F (P08314) Alpha trans-inducing factor 77 kDa protein| Length = 715 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 160 RAGGPEGRSPPADSPIG-SADPRAHPQIPAARR 255 R GP + PA P + DPR HP +P A R Sbjct: 458 RFSGPARQRAPAPPPTSPTLDPRGHPAVPEAPR 490
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/61 (29%), Positives = 25/61 (40%) Frame = +1 Query: 46 SAIQIQPGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPR 225 S ++QP + AA P+G P+ TT A GP+ PP S+ P Sbjct: 3809 SQARLQPQSQPTTRGTAPAASQPAGKPQPGPTT------APGPQPAGPPRAEQASSSKPP 3862 Query: 226 A 228 A Sbjct: 3863 A 3863
>Y046_UREPA (Q9PR99) Hypothetical protein UU046| Length = 791 Score = 24.6 bits (52), Expect(2) = 3.2 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQ 237 P P+ T +T P PP + P DP+ PQ Sbjct: 128 PQPIPQPTPPVETKPKEELLPPSPPPPKEEPKPEPDPQPQPQ 169 Score = 22.7 bits (47), Expect(2) = 3.2 Identities = 9/28 (32%), Positives = 14/28 (50%) Frame = +2 Query: 56 KSNPAPHPRPRPAQKRRNTPAERRKTQK 139 K P P P+P P TP ++ + +K Sbjct: 78 KPQPKPEPQPTPFPDPIPTPPKKEELKK 105
>POLS_EEEV3 (P27284) Structural polyprotein (p130) [Contains: Capsid protein| (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike g Length = 1240 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +2 Query: 56 KSNPAPHPRPRPAQKRRNTPAERRKTQK 139 + PAP P+P A+K+R P +++ +K Sbjct: 67 RKKPAPKPKPAQAKKKRPPPPAKKQKRK 94
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAG----GPEGRSPPADSPIGSADPRAHPQIPAAR 252 PS P+N+ T + GR GP+ + P G+ P PQ P R Sbjct: 197 PSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGALQPSGPPQFPPYR 247
>Y751_TREPA (O83732) Hypothetical protein TP0751 precursor| Length = 237 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +1 Query: 103 AKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 A HPS +NT + T T G +PPA P+G A + H Q P Sbjct: 57 AAHPSDTADNTSGSSTTTDPRS--HGNAPPA--PVGGA-AQTHTQPP 98
>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 225 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = +1 Query: 121 APENTKTTKTNTGRAGGPEGRSPPA----DSPIGSADPR-AHPQIPAA 249 APE + KT A GPE +S A DS SA+P + + PAA Sbjct: 138 APEEGEAKKTEAPAAAGPEAKSDAAPAASDSKPSSAEPAPSSKETPAA 185
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2161 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAG----GPEGRSPPADSPIGSADPRAHPQIPAAR 252 PS P+N+ T + GR GP+ + P G P PQ P R Sbjct: 197 PSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYR 247
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2158 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAG----GPEGRSPPADSPIGSADPRAHPQIPAAR 252 PS P+N+ T + GR GP+ + P G P PQ P R Sbjct: 197 PSLRPQNSTTWRDGGGRGPDDLEGPDSKLHHGHDPRGGLQPSGPPQFPPYR 247
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/61 (29%), Positives = 25/61 (40%) Frame = +1 Query: 46 SAIQIQPGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPR 225 S ++Q + AA HP+G P+ TT A GP+ P GS+ P Sbjct: 3808 SQARLQQQSQPTTRSTAPAASHPAGKPQPGPTT------APGPQPAGLPRAEQAGSSKPA 3861 Query: 226 A 228 A Sbjct: 3862 A 3862
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAG----GPEGRSPPADSPIGSADPRAHPQIPAAR 252 PS P+N+ T + GR GP+ + P G P PQ P R Sbjct: 197 PSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYR 247
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +1 Query: 115 SGAPENTKTTKTNTGRAGGPEGRSPPAD----SPIGSADPRAHPQIPAA 249 S A E T TT T +A + P D SP+GS P+A PAA Sbjct: 2 SEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAA 50
>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1424 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +2 Query: 74 HPRPRPAQKRRNTPAERRKTQ 136 HPRP P Q R P RR+ Q Sbjct: 24 HPRPPPRQSRLQRPCRRRRLQ 44
>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 276 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIPAA 249 ++++A+ P G P+ + N P+G PP P G P +PQ P A Sbjct: 201 KSRSARSPPGKPQGPPQQEGNK-----PQGPPPPG-KPQGPPPPGGNPQQPQA 247
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 9/57 (15%) Frame = +1 Query: 115 SGAPENTKTTKTNTGRAGGPEGRS---------PPADSPIGSADPRAHPQIPAARRD 258 SG P +T+ G AG S PP D P+ + A P P ARRD Sbjct: 188 SGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPPPGDLPLSPSAFSAAPGTPLARRD 244
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = +1 Query: 118 GAPENTKTTKTNTGRAGGPEGRSPP----ADSPIGSADPRAHP-QIPAA 249 G P + T+ G GG EG +PP A +P P P Q PAA Sbjct: 371 GTPPPRRPDGTSVGTRGGSEGATPPVERTATAPTAPKRPGHRPAQAPAA 419
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 157 GRAGGPEGRSPPADSPIGSADPRAHPQIP 243 GRAG P PP +S G PR P +P Sbjct: 467 GRAGPPGPPGPPGESVQGLPGPRGPPGLP 495
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHP 234 P+ P + + + GPE R PPA +P P+ P Sbjct: 36 PAPGPGTATASAATSAASPGPERRPPPAQAPAPQPAPQPAP 76
>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 238 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIPAA 249 ++++A+ P G P+ + N P+G PP P G P +PQ P A Sbjct: 163 KSRSARSPPGKPQGPPQQEGNK-----PQGPPPPG-KPQGPPPPGGNPQQPQA 209
>ATP7B_SHEEP (Q9XT50) Copper-transporting ATPase 2 (EC 3.6.3.4) (Copper pump 2)| (Wilson disease-associated protein homolog) Length = 1505 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/53 (30%), Positives = 21/53 (39%) Frame = +1 Query: 43 TSAIQIQPGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADS 201 T+ +Q P R P G N K + N GP+ R+PPA S Sbjct: 348 TARVQYNPSLVSPGALRRAIEALPPG---NFKVSFPNGAEGSGPDSRTPPAPS 397
>VGLB_HHV2H (P08666) Glycoprotein B precursor| Length = 904 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 59 SNPAPHPRPRPAQKRRNTPAERRKTQKQLKRTQ 157 +N P RP P T A +RKT+K KR + Sbjct: 42 ANGGPASRPPPVPSPATTKARKRKTKKPPKRPE 74
>VGLB_HHV23 (P06763) Glycoprotein B precursor| Length = 904 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 59 SNPAPHPRPRPAQKRRNTPAERRKTQKQLKRTQ 157 +N P RP P T A +RKT+K KR + Sbjct: 42 ANGGPASRPPPVPSPATTKARKRKTKKPPKRPE 74
>S40B_CHITE (Q05019) Salivary gland SP38-40.B protein precursor| Length = 253 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 65 PAPHPRPRPAQKRRNTPAERRKTQKQ 142 PAP P P+PA K PA++ K K+ Sbjct: 228 PAPKPGPKPAPKPVPKPADKPKDAKK 253
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/49 (24%), Positives = 22/49 (44%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQ 237 ++ AK P+ K+ + + A P +SP A SP+ + P+ Sbjct: 618 KSPVAKSPTTKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPTAKSPE 666 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/48 (29%), Positives = 20/48 (41%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHP 234 + + AK P TK+ + A PE +SP A SP + P Sbjct: 613 KPEKAKSPVAKSPTTKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSP 660 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/53 (24%), Positives = 20/53 (37%) Frame = +1 Query: 70 TXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRA 228 T ++ AK P K+ + A P +SP SP+ P+A Sbjct: 651 TAKSPVAKSPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVEEVKPKA 703
>LYOX_CHICK (Q05063) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) Length = 420 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 59 SNPAPHPRPRPAQKRRNTPAERRK 130 + PAP RPR + RR AERR+ Sbjct: 131 ARPAPRRRPRGRRSRRRERAERRR 154
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +1 Query: 64 PGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 PG T GAP T G A P G +P + G ADP A ++P Sbjct: 547 PGAGQRPSGPTGGRPAAPGAP-GTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLP 605 Query: 244 AARRD 258 R++ Sbjct: 606 PERQE 610 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +1 Query: 64 PGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 PG T GAP T G A P G +P + G ADP A ++P Sbjct: 422 PGAGQRPSGPTGGRPAAPGAP-GTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLP 480 Query: 244 AARRD 258 R++ Sbjct: 481 PERQE 485 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +1 Query: 64 PGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 PG T GAP T G A P G +P + G ADP A ++P Sbjct: 297 PGAGQRPSGPTGGRPAAPGAP-GTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLP 355 Query: 244 AARRD 258 R++ Sbjct: 356 PERQE 360 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +1 Query: 64 PGTXXXXXXRTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQIP 243 PG T GAP T G A P G +P + G ADP A ++P Sbjct: 172 PGAGQRPSGPTGGRPAAPGAP-GTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLP 230 Query: 244 AARRD 258 R++ Sbjct: 231 PERQE 235
>MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)| (MMP-15) (Membrane-type matrix metalloproteinase 2) (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2) Length = 669 Score = 24.6 bits (52), Expect(2) = 8.7 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%) Frame = -3 Query: 90 GRGRG-WGAGLDLDGGSRVEV 31 G G G +GAG++ DGGSRV V Sbjct: 595 GDGDGDFGAGVNKDGGSRVVV 615 Score = 21.2 bits (43), Expect(2) = 8.7 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 221 GSAEPIGESAGGDLPSG 171 G AEP +SA GD+ G Sbjct: 581 GGAEPGADSAEGDVGDG 597
>LPIN3_MUSSP (Q7TNN8) Lipin-3| Length = 847 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +1 Query: 100 AAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQI 240 A P APE+ +T N+ AG P + + S P HPQ+ Sbjct: 313 AVDSPLAAPESKETKTQNSRGAGHPPATKSWSWTTPESHTPSGHPQV 359
>GIDB_BRAJA (Q89WP6) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 260 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +1 Query: 118 GAPENTKTTKTNTGRAGGPEGRSPPADSPI--GSADPRAHPQIPAA 249 G + K + +G GP+GRS PA I SA+ R+ + AA Sbjct: 9 GRSSSPKPSAPGSGAGEGPDGRSAPASQKINKASANDRSLDSVIAA 54
>EMAL4_HUMAN (Q9HC35) Echinoderm microtubule-associated protein-like 4 (EMAP-4)| (Restrictedly overexpressed proliferation-associated protein) (Ropp 120) Length = 981 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 56 KSNPAPHPRPRPAQKRRNTPAERRKT-QKQLKR 151 +++P+P P +P Q R TP + T K +KR Sbjct: 142 RASPSPQPSSQPLQIHRQTPESKNATPTKSIKR 174
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +1 Query: 127 ENTKTTKTNTGRAGGPEGRSPPADSPIGSA 216 EN + TG GP+G P ++P G+A Sbjct: 1267 ENESLPRAPTGSTPGPQGTLPARETPAGTA 1296
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 65 PAPHPRPRPAQKRRNTPAERRKT 133 P P P P P ++R TP RR+T Sbjct: 578 PPPPPPPPPRRRRSPTPPPRRRT 600
>KCNQ3_MOUSE (Q8K3F6) Potassium voltage-gated channel subfamily KQT member 3| (Voltage-gated potassium channel subunit Kv7.3) (Potassium channel alpha subunit KvLQT3) (KQT-like 3) Length = 873 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 72 GAGLDLDGGSRVEVGGRSEGRK 7 GAG D DG +E GGR EG++ Sbjct: 59 GAGADKDGTLLLEGGGREEGQR 80
>KCNQ3_HUMAN (O43525) Potassium voltage-gated channel subfamily KQT member 3| (Voltage-gated potassium channel subunit Kv7.3) (Potassium channel alpha subunit KvLQT3) (KQT-like 3) Length = 872 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 72 GAGLDLDGGSRVEVGGRSEGRK 7 GAG D DG +E GGR EG++ Sbjct: 58 GAGADKDGTLLLEGGGRDEGQR 79
>KCNQ3_BOVIN (P58126) Potassium voltage-gated channel subfamily KQT member 3| (Voltage-gated potassium channel subunit Kv7.3) (Potassium channel alpha subunit KvLQT3) (KQT-like 3) Length = 866 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 72 GAGLDLDGGSRVEVGGRSEGRK 7 GAG D DG +E GGR EG++ Sbjct: 58 GAGADKDGTLLLEGGGRDEGQR 79
>HNF3A_HUMAN (P55317) Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box| protein A1) Length = 473 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 91 RTKAAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAH 231 R K K P GA + +G GGPE R P+ + SAD H Sbjct: 266 RFKCEKQP-GAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLH 311
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHP 234 P+ P + + + GPE R PPA +P P+ P Sbjct: 36 PAPGPGAATASAATSAASPGPERRPPPAQAPAPQPAPQPAP 76
>LPIN3_MOUSE (Q99PI4) Lipin-3| Length = 848 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +1 Query: 100 AAKHPSGAPENTKTTKTNTGRAGGPEGRSPPADSPIGSADPRAHPQI 240 A P APE+ +T N+ AG P + + S P HPQ+ Sbjct: 314 AVDSPLAAPESKETKTQNSRGAGHPPATKSWSWTTPESHTPSGHPQV 360
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +1 Query: 112 PSGAPENTKTTKTNTGRAGGPEGRSPPAD-SPIGSADPRAHP 234 P G + + AG P GR+ PA SP G+ RA P Sbjct: 30 PPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASP 71
>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22| Length = 831 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 56 KSNPAPHPRPRPAQKRRNTPAERRKTQKQLKRT 154 K +P+P+PR RPA + P RR++Q + + Sbjct: 44 KRSPSPNPRDRPA----SPPTRRRRSQSPYRNS 72
>CLA4_CANAL (O14427) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)| Length = 971 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 124 PENTKTTKTNTGRAGGPEGRSPPADSPIGSADP-RAHPQIP 243 P N +TK N A E PPA S + P RA P+ P Sbjct: 317 PNNYSSTKNNVQEANLQEWVKPPAKSTVSQFKPSRAAPKPP 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,971,785 Number of Sequences: 219361 Number of extensions: 588465 Number of successful extensions: 3486 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3443 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
