>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 31/53 (58%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
 Frame = +3

Query: 282 MLPRKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDEDLHSRQLA 425
           MLPRKREIVA EVE+ QKK R                GR  EIDEDLHSRQLA
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLA 53

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 31/53 (58%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
 Frame = +3

Query: 282 MLPRKREIVASEVENQQKKARP-----XXXXXXXXXXGRPTEIDEDLHSRQLA 425
           MLPRKREIVA EVE+ QKK R                GR  EIDEDLHSRQLA
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLA 53

>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
 Frame = +3

Query: 282 MLPRKREIVASEVENQQK--------KARPXXXXXXXXXXGRPTEIDEDLHSRQLA 425
           MLP KR   A+  +   +          R             P EIDEDLHSRQLA
Sbjct: 1   MLPSKRPSDAAAGDENGRGGDARGPGSGRRRARAAAGAVTAAPQEIDEDLHSRQLA 56

>BRD8_HUMAN (Q9H0E9) Bromodomain-containing protein 8 (p120) (Skeletal muscle|
            abundant protein) (Thyroid hormone receptor coactivating
            protein 120kDa) (TrCP120)
          Length = 1235

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +3

Query: 108  SLRFSSPLALPVSRRAAHGQLQVPPRTLDL 197
            S RFSSP   PVS R A G   V  R +DL
Sbjct: 1121 SHRFSSPFLKPVSERQAPGYKDVVKRPMDL 1150

>RBL2_RAT (O55081) Retinoblastoma-like protein 2 (130 kDa|
           retinoblastoma-associated protein) (PRB2) (P130) (RBR-2)
           (PPAR-alpha-interacting complex protein 128) (PRIC128)
          Length = 1135

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 51  GSPRTPRILGELRTSAQSPSLRFSSPLAL 137
           GSP TPR +GE+RT A       +SP  L
Sbjct: 635 GSPLTPRRVGEVRTDAGGLGRSVTSPTTL 663

>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor|
           (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme
           4) (Subtilisin/kexin-like protease PACE4)
           (Subtilisin-like proprotein convertase 4) (SPC4)
          Length = 969

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 420 AGGCGGPRRSPWASLPWPW 364
           AGG GGP   P A  PW W
Sbjct: 33  AGGAGGPGFRPLAPRPWRW 51

>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22|
          Length = 1010

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +3

Query: 42  NPRGSPRTPRILGELRTSAQSPSLRFSSPLALPVSRRAAHGQLQVPPR 185
           +PR    TPR     R S +SPS R  SP A  V R ++      PPR
Sbjct: 80  HPRSRSPTPRSQSPSRRSVRSPSPRQGSP-ARRVDRSSSPRARSPPPR 126


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,901,464
Number of Sequences: 219361
Number of extensions: 457462
Number of successful extensions: 2083
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2081
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)