ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493810.1| Oryza sativa (japonica cultivar-group), predic... 131 2e-27
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 6e-12
3gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 80 6e-12
4gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 80 6e-12
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
6dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
7gb|CP000110.1| Synechococcus sp. CC9605, complete genome 42 1.4
8ref|XM_952343.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
9ref|XM_327496.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
10gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 1.4
11emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC... 42 1.4
12gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
13ref|XM_311345.2| Anopheles gambiae str. PEST ENSANGP00000021380 ... 42 1.4
14gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
15gb|AY022688.1| Oryza sativa microsatellite MRG5013 containing (C... 40 5.3
16gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, comple... 40 5.3
17gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complet... 40 5.3
18emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.3
19gb|AC118554.2| Homo sapiens chromosome 1 clone RP11-61E2, comple... 40 5.3
20ref|NM_142989.3| Drosophila melanogaster Dis3 CG6413-RA (Dis3), ... 40 5.3
21gb|AY052150.1| Drosophila melanogaster SD10981 full length cDNA 40 5.3
22gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.3
23gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, r... 40 5.3
24ref|NM_210184.1| Eremothecium gossypii AEL031Cp (AEL031C), mRNA 40 5.3
25emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.3
26gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85... 40 5.3
27gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.3
28emb|AJ276897.1|DME276897 Drosophila melanogaster mRNA for putati... 40 5.3 
>ref|XM_493810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2727

 Score =  131 bits (66), Expect = 2e-27
 Identities = 120/138 (86%)
 Strand = Plus / Plus

                                                                       
Query: 243 atcctcgtcgtcgacaccaacgtcgtgctccaccagatcgatttgttggagaatccggcg 302
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 157 atcctcgtcgtcgacaccaacgtcgtgctccaccagatcgatttgctggagaatccagcg 216

                                                                       
Query: 303 attgaggatgtcgtggtgctgtcggtggtgctggacgaagtgaagaacaagaacctctcc 362
           ||||| ||||| ||  | || ||||| ||| |||| || |||||||| || |||||| | 
Sbjct: 217 attgacgatgttgtcctactatcggttgtgttggatgaggtgaagaataaaaacctcgca 276

                             
Query: 363 gtgtacaacaggctcaag 380
           |||| ||||||| |||||
Sbjct: 277 gtgttcaacaggatcaag 294



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 91  tgcagagcaagtcgttcgtcaagaagacgaagcagggccgcgtcgtcaaggtggtccggg 150
           ||||||||||| | ||||| |||||||||| |   |||||||||   ||||||||| |||
Sbjct: 5   tgcagagcaagaccttcgtgaagaagacgagggcaggccgcgtccagaaggtggtcaggg 64

                                                       
Query: 151 agcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
           ||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 65  agcactacctccgcgacgacatctcctgcggcgccgcctcctgc 108
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139     aggtggtccgggagcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
               |||||||| |||||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 1640988 aggtggtcagggagcactacctccgcgacgacatctcctgcggcgccgcctcctgc 1640933



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                   
Query: 243     atcctcgtcgtcgacaccaacgtcgtgctccaccag 278
               ||||||||||||||||||||||||||||||||||||
Sbjct: 1640884 atcctcgtcgtcgacaccaacgtcgtgctccaccag 1640849



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                           
Query: 276     cagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcggtggtgctg 335
               |||||||||||| |||||||||| |||||||| ||||| ||  | || ||||| ||| ||
Sbjct: 1640772 cagatcgatttgctggagaatccagcgattgacgatgttgtcctactatcggttgtgttg 1640713

                                                            
Query: 336     gacgaagtgaagaacaagaacctctccgtgtacaacaggctcaag 380
               || || |||||||| || |||||| | |||| ||||||| |||||
Sbjct: 1640712 gatgaggtgaagaataaaaacctcgcagtgttcaacaggatcaag 1640668



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 73      ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
               |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 1641139 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 1641092
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>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 139   aggtggtccgggagcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
             |||||||| |||||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 48434 aggtggtcagggagcactacctccgcgacgacatctcctgcggcgccgcctcctgc 48379



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                 
Query: 243   atcctcgtcgtcgacaccaacgtcgtgctccaccag 278
             ||||||||||||||||||||||||||||||||||||
Sbjct: 48330 atcctcgtcgtcgacaccaacgtcgtgctccaccag 48295



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                         
Query: 276   cagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcggtggtgctg 335
             |||||||||||| |||||||||| |||||||| ||||| ||  | || ||||| ||| ||
Sbjct: 48218 cagatcgatttgctggagaatccagcgattgacgatgttgtcctactatcggttgtgttg 48159

                                                          
Query: 336   gacgaagtgaagaacaagaacctctccgtgtacaacaggctcaag 380
             || || |||||||| || |||||| | |||| ||||||| |||||
Sbjct: 48158 gatgaggtgaagaataaaaacctcgcagtgttcaacaggatcaag 48114



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 73    ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
             |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 48585 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 48538
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>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                      
Query: 139    aggtggtccgggagcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
              |||||||| |||||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 120549 aggtggtcagggagcactacctccgcgacgacatctcctgcggcgccgcctcctgc 120494



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                  
Query: 243    atcctcgtcgtcgacaccaacgtcgtgctccaccag 278
              ||||||||||||||||||||||||||||||||||||
Sbjct: 120445 atcctcgtcgtcgacaccaacgtcgtgctccaccag 120410



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                          
Query: 276    cagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcggtggtgctg 335
              |||||||||||| |||||||||| |||||||| ||||| ||  | || ||||| ||| ||
Sbjct: 120333 cagatcgatttgctggagaatccagcgattgacgatgttgtcctactatcggttgtgttg 120274

                                                           
Query: 336    gacgaagtgaagaacaagaacctctccgtgtacaacaggctcaag 380
              || || |||||||| || |||||| | |||| ||||||| |||||
Sbjct: 120273 gatgaggtgaagaataaaaacctcgcagtgttcaacaggatcaag 120229



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 73     ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
              |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 120700 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 120653
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139     aggtggtccgggagcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
               |||||||| |||||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 1640986 aggtggtcagggagcactacctccgcgacgacatctcctgcggcgccgcctcctgc 1640931



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                   
Query: 243     atcctcgtcgtcgacaccaacgtcgtgctccaccag 278
               ||||||||||||||||||||||||||||||||||||
Sbjct: 1640882 atcctcgtcgtcgacaccaacgtcgtgctccaccag 1640847



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                           
Query: 276     cagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcggtggtgctg 335
               |||||||||||| |||||||||| |||||||| ||||| ||  | || ||||| ||| ||
Sbjct: 1640770 cagatcgatttgctggagaatccagcgattgacgatgttgtcctactatcggttgtgttg 1640711

                                                            
Query: 336     gacgaagtgaagaacaagaacctctccgtgtacaacaggctcaag 380
               || || |||||||| || |||||| | |||| ||||||| |||||
Sbjct: 1640710 gatgaggtgaagaataaaaacctcgcagtgttcaacaggatcaag 1640666



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 73      ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
               |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 1641137 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 1641090
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>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 139   aggtggtccgggagcactacctccgcgacgacatcccctgcggcgccttctcctgc 194
             |||||||| |||||||||||||||||||||||||| |||||||||||  |||||||
Sbjct: 53451 aggtggtcagggagcactacctccgcgacgacatctcctgcggcgccgcctcctgc 53396



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                 
Query: 243   atcctcgtcgtcgacaccaacgtcgtgctccaccag 278
             ||||||||||||||||||||||||||||||||||||
Sbjct: 53347 atcctcgtcgtcgacaccaacgtcgtgctccaccag 53312



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                         
Query: 276   cagatcgatttgttggagaatccggcgattgaggatgtcgtggtgctgtcggtggtgctg 335
             |||||||||||| |||||||||| |||||||| ||||| ||  | || ||||| ||| ||
Sbjct: 53235 cagatcgatttgctggagaatccagcgattgacgatgttgtcctactatcggttgtgttg 53176

                                                          
Query: 336   gacgaagtgaagaacaagaacctctccgtgtacaacaggctcaag 380
             || || |||||||| || |||||| | |||| ||||||| |||||
Sbjct: 53175 gatgaggtgaagaataaaaacctcgcagtgttcaacaggatcaag 53131



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 73    ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
             |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 53602 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 53555
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 183    gccttctcctgcccctcctgc 203
              |||||||||||||||||||||
Sbjct: 825987 gccttctcctgcccctcctgc 825967
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>ref|XM_952343.1| Neurospora crassa OR74A hypothetical protein (NCU07211.1) partial
           mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 316 tggtgctgtcggtggtgctgg 336
           |||||||||||||||||||||
Sbjct: 687 tggtgctgtcggtggtgctgg 707
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>ref|XM_327496.1| Neurospora crassa OR74A hypothetical protein (NCU07211.1) partial
           mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 316 tggtgctgtcggtggtgctgg 336
           |||||||||||||||||||||
Sbjct: 687 tggtgctgtcggtggtgctgg 707
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 319    tgctgtcggtggtgctggacg 339
              |||||||||||||||||||||
Sbjct: 375597 tgctgtcggtggtgctggacg 375617
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>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12
          Length = 154038

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   tggtgctgtcggtggtgctgg 336
             |||||||||||||||||||||
Sbjct: 35736 tggtgctgtcggtggtgctgg 35716
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 247     tcgtcgtcgacaccaacgtcgtgctccac 275
               ||||| |||||||||||||| ||||||||
Sbjct: 1806149 tcgtcctcgacaccaacgtcctgctccac 1806177
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>ref|XM_311345.2| Anopheles gambiae str. PEST ENSANGP00000021380
           (ENSANGG00000018891), partial mRNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 75  gagctcgccaagatgctgcag 95
           |||||||||||||||||||||
Sbjct: 253 gagctcgccaagatgctgcag 273
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    ggtgctgtcggtggtgctgga 337
              |||||||||||||||||||||
Sbjct: 897481 ggtgctgtcggtggtgctgga 897501
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>gb|AY022688.1| Oryza sativa microsatellite MRG5013 containing (CCG)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 73  ccgagctcgccaagatgctgcagagcaagtcgttcgtcaagaagacga 120
           |||| |||||| | ||| ||||||||||| | ||||| ||||||||||
Sbjct: 139 ccgacctcgccgacatgttgcagagcaagaccttcgtgaagaagacga 186
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>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ccttctcctgcccctcctgc 203
            ||||||||||||||||||||
Sbjct: 1396 ccttctcctgcccctcctgc 1377
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>gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complete sequence
          Length = 210519

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ccttctcctgcccctcctgc 203
              ||||||||||||||||||||
Sbjct: 107182 ccttctcctgcccctcctgc 107201
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>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    tggtgctgtcggtggtgctg 335
              ||||||||||||||||||||
Sbjct: 182398 tggtgctgtcggtggtgctg 182379
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>gb|AC118554.2| Homo sapiens chromosome 1 clone RP11-61E2, complete sequence
          Length = 34319

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   caagatgctgcagagcaagt 102
            ||||||||||||||||||||
Sbjct: 4236 caagatgctgcagagcaagt 4217
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>ref|NM_142989.3| Drosophila melanogaster Dis3 CG6413-RA (Dis3), mRNA
          Length = 3599

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 147 cgggagcactacctccgcgacgacatcccctgcggc 182
           ||||||||||| || ||||||||||||  |||||||
Sbjct: 131 cgggagcactatctgcgcgacgacatcggctgcggc 166
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>gb|AY052150.1| Drosophila melanogaster SD10981 full length cDNA
          Length = 3129

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 147 cgggagcactacctccgcgacgacatcccctgcggc 182
           ||||||||||| || ||||||||||||  |||||||
Sbjct: 132 cgggagcactatctgcgcgacgacatcggctgcggc 167
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 137    caaggtggtccgggagcactacctccgcgacgacat 172
              ||||||||| ||||||||||| || ||| |||||||
Sbjct: 577387 caaggtggtgcgggagcactatctgcgcaacgacat 577352
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>gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, region 95E-95F, BAC clone
             BACR04E17, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 147   cgggagcactacctccgcgacgacatcccctgcggc 182
             ||||||||||| || ||||||||||||  |||||||
Sbjct: 83009 cgggagcactatctgcgcgacgacatcggctgcggc 83044
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>ref|NM_210184.1| Eremothecium gossypii AEL031Cp (AEL031C), mRNA
          Length = 2994

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 137 caaggtggtccgggagcactacctccgcgacgacat 172
           ||||||||| ||||||||||| || ||| |||||||
Sbjct: 141 caaggtggtgcgggagcactatctgcgcaacgacat 176
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 316     tggtgctgtcggtggtgctg 335
               ||||||||||||||||||||
Sbjct: 1504471 tggtgctgtcggtggtgctg 1504452
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>gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85 of 118 of the
             complete sequence
          Length = 206741

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 147   cgggagcactacctccgcgacgacatcccctgcggc 182
             ||||||||||| || ||||||||||||  |||||||
Sbjct: 83265 cgggagcactatctgcgcgacgacatcggctgcggc 83300
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 315    gtggtgctgtcggtggtgctggac 338
              ||||||||||| ||||||||||||
Sbjct: 168691 gtggtgctgtccgtggtgctggac 168714
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>emb|AJ276897.1|DME276897 Drosophila melanogaster mRNA for putative exoribonuclease DIS3
          Length = 3602

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 147 cgggagcactacctccgcgacgacatcccctgcggc 182
           ||||||||||| || ||||||||||||  |||||||
Sbjct: 132 cgggagcactatctgcgcgacgacatcggctgcggc 167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,859,238
Number of Sequences: 3902068
Number of extensions: 1859238
Number of successful extensions: 40748
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40345
Number of HSP's gapped (non-prelim): 403
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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