Clone Name | bastl18e12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC ... | 30 | 1.9 | 2 | ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC ... | 28 | 4.2 | 3 | TRKA_ARCFU (O29420) Trk system potassium uptake protein trkA hom... | 27 | 9.3 | 4 | CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [U... | 27 | 9.3 |
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>ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43)| (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4) (Protein SET DOMAIN GROUP 16) Length = 990 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +1 Query: 118 ILTEKTRRAQATLKGFVAERGYACACD-SSCGYRRDGKALSAVEFEKHAGAKSKN 279 +L +K A ++G R + C SCG ++ KALS E+E+H G+KSKN Sbjct: 488 VLPDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKK--KALS--EWERHTGSKSKN 538
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 187 CACDSSCGYRRDGKALSAVEFEKHAGAKSKN 279 C C SCG R KALS E+E+H G+K+KN Sbjct: 519 CKC-GSCGPER--KALS--EWERHTGSKAKN 544
>TRKA_ARCFU (O29420) Trk system potassium uptake protein trkA homolog| (K(+)-uptake protein trkA homolog) Length = 436 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 208 GYRRDGKALSAVEFEKHAGAKSKNQNGHIFLPNGTSL 318 G + DGKA++ + ++ S +NGHI +P G ++ Sbjct: 158 GSKADGKAIADLYLPQNVVIASIYRNGHIEIPRGDTV 194
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +1 Query: 199 SSCGYRRDGKALSAVEFEKHAGAKSKNQNGHIF 297 S CG R+ GK+ +EK G + N +F Sbjct: 661 SCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLF 693 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,317,599 Number of Sequences: 219361 Number of extensions: 465670 Number of successful extensions: 1096 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1096 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)