>U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490|
          Length = 1058

 Score =  164 bits (415), Expect = 5e-41
 Identities = 75/105 (71%), Positives = 94/105 (89%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 245
           KKVDERIRTLIENGV+ R RSMF+I+GDK+RDQIVNL+++L+KS VKS PSVLWCY+N+L
Sbjct: 3   KKVDERIRTLIENGVKLRHRSMFVIIGDKARDQIVNLHHILSKSVVKSNPSVLWCYKNRL 62

Query: 246 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYK 380
           +ISSH KKRAKQ+KK+ +RG +DPEK D FSLFL+  D+T+C+YK
Sbjct: 63  DISSHNKKRAKQLKKMKERGQLDPEKLDAFSLFLDVVDVTHCLYK 107

>U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940|
          Length = 1024

 Score =  153 bits (387), Expect = 8e-38
 Identities = 69/105 (65%), Positives = 91/105 (86%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 245
           KKVDERIRTLIENGV+ R RSMF+I+GDKSRDQIVNL++ML+K+ +K  PSVLWCY++KL
Sbjct: 3   KKVDERIRTLIENGVKLRHRSMFVIIGDKSRDQIVNLHHMLSKAVIKCNPSVLWCYKDKL 62

Query: 246 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYK 380
           +ISSH++KR+KQ+K+L +RG +DPEK D FS  L+   +T+C+YK
Sbjct: 63  DISSHKQKRSKQLKRLRERGQLDPEKLDAFSRLLDVGRVTHCLYK 107

>ALP_HUMAN (Q9H0A0) N-acetyltransferase-like protein (EC 2.3.1.-)|
          Length = 1025

 Score =  132 bits (331), Expect = 3e-31
 Identities = 58/104 (55%), Positives = 84/104 (80%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 245
           KKVD RIR LIENGV +RQRS+F++VGD+ +DQ+V L++ML+K+ VK+RPSVLWCY+ +L
Sbjct: 4   KKVDNRIRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKEL 63

Query: 246 EISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMY 377
             SSHRKKR +Q++K ++ G ++ ++ DPF LF+  ++I YC Y
Sbjct: 64  GFSSHRKKRMRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYY 107

>YDK9_SCHPO (P87115) Hypothetical UPF0202 protein C20G8.09c in chromosome I|
          Length = 1033

 Score =  122 bits (305), Expect = 3e-28
 Identities = 55/106 (51%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCY-RNK 242
           K +D RI TLI+NG +++QRS F++VGD++RDQ+VNL+++L++S+V +RP+VLW Y ++ 
Sbjct: 4   KALDSRIPTLIKNGCQEKQRSFFVVVGDRARDQVVNLHWLLSQSKVAARPNVLWMYKKDL 63

Query: 243 LEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYK 380
           L  +SHRKKR  +IKK ++RG+ DP   DPF LF   ++I YC YK
Sbjct: 64  LGFTSHRKKRENKIKKEIKRGIRDPNSEDPFELFCSITNIRYCYYK 109

>YIL8_CAEEL (O01757) Hypothetical UPF0202 protein F55A12.8 in chromosome I|
          Length = 1043

 Score =  108 bits (271), Expect = 2e-24
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = +3

Query: 69  KVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLE 248
           K+D RIRT IENGV    RSMF +VGDK+RDQ+  L ++L+KS V +RP+VLWCY+ +L 
Sbjct: 4   KLDGRIRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYKKELS 63

Query: 249 ISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMY 377
            S+HR K+AK++KK           ADPF +F+ ++ I YC Y
Sbjct: 64  FSTHRAKKAKKMKKATTTISGSLPDADPFDVFISSTQIRYCYY 106

>YNN2_YEAST (P53914) Hypothetical UPF0202 protein YNL132w|
          Length = 1056

 Score =  103 bits (257), Expect = 1e-22
 Identities = 49/106 (46%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNK- 242
           K +D RI +LI NGV+ +QRS+F+IVGD++R+Q+ NL+Y++  + +K   SVLW Y+ K 
Sbjct: 4   KAIDSRIPSLIRNGVQTKQRSIFVIVGDRARNQLPNLHYLMMSADLKMNKSVLWAYKKKL 63

Query: 243 LEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSDITYCMYK 380
           L  +SHRKKR  +IKK ++RG  +  + DPF  F+   +I Y  YK
Sbjct: 64  LGFTSHRKKRENKIKKEIKRGTREVNEMDPFESFISNQNIRYVYYK 109

>U202_DROME (Q9W3C1) Polycomb protein l(1)G0020 (p110 protein)|
          Length = 1008

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = +3

Query: 66  KKVDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL 245
           KK+D RIR +IENGV+   R+MFI++GDK+RDQ+  L  +L KS VK+RP+VLWCY+NK 
Sbjct: 4   KKIDNRIRVMIENGVKLGHRTMFIVIGDKARDQVPILYDILTKSTVKARPTVLWCYKNKD 63

Query: 246 E-ISSHRKKRAKQIKKLMQRGLMDPEKADPFSLF 344
           E IS+H KKRAK+I      G +D  +AD F  F
Sbjct: 64  EAISNHGKKRAKKIAV----GKVDVNEADLFDSF 93

>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 161  PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 289
            P   P L     P  +A  + L++PQQ + QQ QEE +Q  Q+
Sbjct: 902  PQAIPTLQLQSAPSTIADPQQLMVPQQQQQQQHQEEQQQQPQQ 944

>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 24/94 (25%), Positives = 42/94 (44%)
 Frame = +3

Query: 78  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISS 257
           ER  T  +N   + QR M   + D + D       +L+  R K  P   W +  + ++  
Sbjct: 425 ERYLTEAQNTYEELQREMKKSLMDLANDAC----QLLSGERYKEDP---WLWDLEWDLQE 477

Query: 258 HRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSD 359
            ++K+AK++KK      +  E A PF   ++  D
Sbjct: 478 FKQKKAKKVKKPASASKLPIEGAGPFGDPMDQED 511

>GPA12_CAEEL (Q19572) Guanine nucleotide-binding protein alpha-12 subunit|
          Length = 355

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = +3

Query: 99  ENGVRQRQRSMFII--VGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKR 272
           E+G     + M II   G+ + D++      + ++ + S   VL   RNKL I+    KR
Sbjct: 39  ESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI-SAMRVLLDARNKLGIAWEDPKR 97

Query: 273 AKQIKKLMQRGLMDPEKADPFSLFLETSDI 362
             +++K+M+  + D  K   F+ F+E + I
Sbjct: 98  QVEVEKVMRFSVGDLLKGIDFTTFVEVAPI 127

>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 167 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 289
           RQ Q    Q P+Q+   + L  PQQ + QQP ++ +Q+ ++
Sbjct: 30  RQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQ 70

>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)|
          Length = 508

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 370 Q*VMSEVSRKREKGSAFSGSMSPRCMSFLICLARFFLWLLISSL 239
           Q  +S + R+R+        MS    +FLIC   FFLW ++SSL
Sbjct: 336 QSTISTMRRERKAARTLGIIMS----AFLICWLPFFLWYIVSSL 375

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 173 PQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAHAARA 307
           P +   Q P+QV  ++    PQQA+     ++A+QA Q   A +A
Sbjct: 664 PSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQA 708



 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 167 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAHAARA 307
           +QPQ    Q P+Q  P++    PQQ +  QP ++  Q  Q+A    A
Sbjct: 733 QQPQ--QAQQPQQAPPVQQ---PQQVQQAQPTQQQAQTQQQAQRRSA 774

>CN102_MOUSE (Q80XC6) Protein C14orf102 homolog|
          Length = 1172

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = +3

Query: 150 KSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKAD 329
           KS+  +  L Y +AK        V+WC   K       K + K  KKL +  L +PE  +
Sbjct: 738 KSQLSLSWLRYEIAK--------VIWCLHTK---KKRLKSQGKSCKKLAKNLLKEPENRN 786

Query: 330 PFSLFLETSDITYCM 374
            F L+ + + + + +
Sbjct: 787 NFCLWKQYAHLEWLL 801

>GPA12_CAEBR (Q613V4) Guanine nucleotide-binding protein alpha-12 subunit|
          Length = 355

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = +3

Query: 99  ENGVRQRQRSMFII--VGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKR 272
           E+G     + M II   G+ + D++      + ++ + S   VL   RNKL I+    KR
Sbjct: 39  ESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI-SAMRVLLDARNKLGIAWEDPKR 97

Query: 273 AKQIKKLMQRGLMDPEKADPFSLFLETSDI 362
             +++K+M+  + D  K   F+ F+E + I
Sbjct: 98  QVEVEKVMRFTVGDLLKGIDFTTFVEVAPI 127

>UVRB_FUSNN (Q8RGR2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 663

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/56 (30%), Positives = 33/56 (58%)
 Frame = +3

Query: 159 DQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKA 326
           + ++NL+Y + + + ++   V   +RNK +I     K  K+IKKL++   +D E+A
Sbjct: 596 EDLINLDYGIEEKKFENDKKV---FRNKTDIEKEITKLEKKIKKLVEE--LDFEQA 646

>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2|
          Length = 525

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 161 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 286
           P +QPQ    Q P+Q         PQQ   QQPQ++ +Q  Q
Sbjct: 124 PQQQPQQQPQQQPQQQ--------PQQQPQQQPQQQPQQQPQ 157



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 167 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 289
           +QP + A Q P+Q    +    PQQ   QQPQ++ +Q  Q+
Sbjct: 115 QQPDI-AQQQPQQQPQQQPQQQPQQQPQQQPQQQPQQQPQQ 154

>DPOG1_RAT (Q9QYV8) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1216

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +3

Query: 78  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVN-LNYMLAKSRVKSRPSVLWCYRNKLEIS 254
           ER  T  ++   + QR M      KS  ++ N    +L+  R K  P   W +  + ++ 
Sbjct: 424 ERYLTEAQSTYEELQREM-----KKSLMELANDACQLLSGERYKEDP---WLWDLEWDLQ 475

Query: 255 SHRKKRAKQIKKLMQRGLMDPEKADPFSLFLETSD 359
             ++K+AK++KK      +  E A PF   ++  D
Sbjct: 476 EFKQKKAKKVKKTASASKLPIEGAGPFGDPMDQED 510

>CN102_HUMAN (Q9H7Z3) Protein C14orf102|
          Length = 1164

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +3

Query: 174 LNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFLET 353
           L Y +AK        V+WC   K +     K + K  KKL +  L +PE  + F L+ + 
Sbjct: 737 LQYEIAK--------VIWCLHTKNK--KRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQY 786

Query: 354 SDITYCM 374
           + + + +
Sbjct: 787 AHLEWLL 793

>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 760

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 161 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 286
           P +QPQ   GQ P+Q+   +    PQQ   QQPQ+   Q  Q
Sbjct: 658 PGQQPQQIPGQQPQQIPGQQ----PQQIPGQQPQQIPVQQPQ 695



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 161 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQ 262
           P +QPQ   GQ P+Q+   +   +P Q    QPQ
Sbjct: 666 PGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQ 699

>SYG_AERPE (Q9YBF8) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA|
           ligase) (GlyRS)
          Length = 583

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 197 PRQVAPLRALVLPQQARDQQPQEEAR 274
           PR +AP++A+VLP    D++  E AR
Sbjct: 468 PRDIAPVQAVVLPLVENDEKLVERAR 493

>AMBN_MOUSE (O55189) Ameloblastin precursor|
          Length = 407

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 161 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQP 259
           P  QP +H GQ+P Q   L A   PQ A  + P
Sbjct: 132 PGPQPPMHPGQLPLQEGELIAPDEPQVAPSENP 164

>MEF2D_HUMAN (Q14814) Myocyte-specific enhancer factor 2D|
          Length = 521

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 161 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAH 295
           P +  Q    Q P+Q  P      PQQ + QQPQ+  +   Q++H
Sbjct: 367 PQQPQQPQQPQPPQQQPPQ-----PQQPQPQQPQQPQQPPQQQSH 406

>YWBL_BACSU (P39595) Hypothetical protein ywbL precursor|
          Length = 481

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +3

Query: 204 KSRPSVLWCYRN----KLEISSHRKKRAKQIKKLMQRGLMDPEKADPFS 338
           +S+ +   C++N    K EI SH +K +KQI +++Q  L++P  +  +S
Sbjct: 172 QSKEAYTTCHQNLALMKAEIGSHPEKVSKQIDEMIQ--LLEPIASSSYS 218

>GDB2_WHEAT (P08453) Gamma-gliadin precursor|
          Length = 327

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 170 QPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 286
           QPQ    QVP+   P +  + PQQ   QQPQ+   Q  Q
Sbjct: 62  QPQQ---QVPQPQQPQQPFLQPQQPFPQQPQQPFPQTQQ 97

>RIBAB_CHLPN (Q9Z734) Riboflavin biosynthesis protein ribAB [Includes: GTP|
           cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II);
           3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
           synthase)]
          Length = 418

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 145 PTMMNMDRCRCRTPFSISV 89
           P M+  +RCR +TPF++SV
Sbjct: 81  PPMVKDNRCRFKTPFTVSV 99

>FIG4_YEAST (P42837) Polyphosphoinositide phosphatase (EC 3.1.3.-)|
           (Phosphatidylinositol 3,5-bisphosphate 5-phosphatase)
           (Factor-induced gene 4)
          Length = 879

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 231 YRNKLEISSHRKKRAKQIKKLMQRGLMDPEKADPFSLFL 347
           YR   + SSH +   + IK+      +D ++ D  +LFL
Sbjct: 538 YRKINQWSSHSRDMIESIKRFYSNSFVDAQRQDAINLFL 576

>DGKI_HUMAN (O75912) Diacylglycerol kinase iota (EC 2.7.1.107) (Diglyceride|
           kinase iota) (DGK-iota) (DAG kinase iota)
          Length = 1065

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 234 RNKLEISSHRKKRAKQIKKLMQRGLMDPEKADPF 335
           +N L+ S+ +KKR    +K  +RG+    K  PF
Sbjct: 331 QNSLKASNRKKKRTSFKRKASKRGMEQENKGRPF 364


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,245,903
Number of Sequences: 219361
Number of extensions: 442392
Number of successful extensions: 1841
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)