ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21) 31 0.84
2CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog 31 1.1

>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 46  SAGARPRRRDHPYHPISHHGEAR 114
           S GA P R  HP H   HHG+A+
Sbjct: 76  SGGAGPTRHHHPAHHFHHHGQAQ 98



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>CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog|
          Length = 1091

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 46  SAGARPRRRDHPYHPISHHGEA 111
           S GA P R  HP H   HHG+A
Sbjct: 76  SGGAGPSRHHHPAHHFHHHGQA 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,724,343
Number of Sequences: 219361
Number of extensions: 176338
Number of successful extensions: 908
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 80,573,946
effective HSP length: 15
effective length of database: 77,283,531
effective search space used: 1854804744
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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