ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocy... 172 4e-43
2SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8 36 0.031
3BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc... 32 0.58
4BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... 32 0.58
5MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48) 31 0.99
6BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc... 31 1.3
7BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa... 31 1.3
8NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p... 31 1.3
9NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4... 31 1.3
10VGLC_BHV1C (P14378) Glycoprotein GIII precursor 30 2.2
11FA84A_BOVIN (Q3ZCA1) Protein FAM84A 30 2.2
12REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP) 29 3.7
13YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I 29 4.9
14PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain... 28 6.4
15DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein... 28 6.4
16GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondri... 28 6.4
17CD123_YEAST (Q05791) Cell division cycle protein 123 28 6.4
18SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1... 28 8.3
19FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1) 28 8.3

>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
           component Sec8)
          Length = 1053

 Score =  172 bits (435), Expect = 4e-43
 Identities = 83/110 (75%), Positives = 95/110 (86%)
 Frame = +1

Query: 79  GIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 258
           GIF+GLP+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I  LKEQSD++
Sbjct: 2   GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61

Query: 259 EDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEMAEAKSCL 408
           E+VVDEVVHAYH GFNKAIQNYS ILRLFSES E I  LK ++AEAK  L
Sbjct: 62  EEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSL 111



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>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8|
          Length = 1111

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +1

Query: 202 TSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKG 381
           +S  R  E +  ++    +++ +  +VH +H GFN +I  +  I      S + +  LK 
Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174

Query: 382 EMAEAKSCL 408
            +A +K+ L
Sbjct: 175 SLAASKTAL 183



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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038



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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035



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>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)|
          Length = 489

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
 Frame = +1

Query: 25  RLSPGPASPSVTMNRHRRGIFDGLP-------IPPD---KSYLKEGLSRIDEGWAAARFD 174
           ++SP P  PS++M R    I+  LP       + P    KS     +S++      + F 
Sbjct: 83  KVSPRPTPPSLSMRRSEASIYT-LPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFS 141

Query: 175 SLPHV--VHILTSKDRDGEIQFLKEQSDLI 258
             PH+  VH L+ K +D +++ ++ +S  I
Sbjct: 142 EKPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171



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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036



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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6    PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 122
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039



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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947



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>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 12   SPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 164
            S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 895  SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947



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>VGLC_BHV1C (P14378) Glycoprotein GIII precursor|
          Length = 521

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
 Frame = +3

Query: 3   SPVSPDLAP---LPGSRLAVGNDEPP-------PAWHLRRPPNSARQILPEGRAVADRRG 152
           +P SPD  P    PG+   VG  EPP       P  +   PP       P G   A R G
Sbjct: 57  TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116

Query: 153 MGSG 164
             SG
Sbjct: 117 RPSG 120



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>FA84A_BOVIN (Q3ZCA1) Protein FAM84A|
          Length = 297

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 91  GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L+  D     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295



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>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)|
          Length = 595

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +1

Query: 112 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKEQSDLIEDVVD 273
           ++Y+K G +R    W+    + L +V+H +    ++   DGE   +K+ S  IED  D
Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436



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>YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I|
          Length = 783

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +1

Query: 124 KEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGE-IQFLKEQSDLIEDVVDEVVHAYHHG 300
           K G S +D+G AA+R+D+      +   K+R  E ++ L+EQ + I+ V   V+      
Sbjct: 349 KLGESNVDDGMAASRYDT------VKREKERLSEHLKSLQEQYEHIQSVYKNVL------ 396

Query: 301 FNKAIQNYSHILRLFSESAES 363
               +   S+I+RL ++ +E+
Sbjct: 397 ----LDRESYIMRLGNKISEN 413



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>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -2

Query: 151  PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 20
            PRRS    P+G +   E GG R C  G G     +  P++  D G  A+
Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565



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>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 662

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -3

Query: 150 LVDPRQPFLQV-RFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 22
           ++ PR  F  + RFV R+WE +ED++ +AV  Y  R   RG+ R
Sbjct: 59  VLSPRNTFSNLKRFVGRDWEELEDSS-LAV-PYTVRANDRGQVR 100



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>GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 165

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
 Frame = +1

Query: 4   AQSLQISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLP 183
           A +L++S  S    SP+ +++R    + DGL   P   ++K   S    G      D L 
Sbjct: 11  ANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLG 70

Query: 184 HVVHI--------LTSKDRDGEIQFLKEQSDLIEDVVDEVV 282
            VV +        +T     G ++ +K  SD+   +  EV+
Sbjct: 71  EVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVI 111



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>CD123_YEAST (Q05791) Cell division cycle protein 123|
          Length = 360

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 285
           HI+ +  RD     +L E SD  +D++DE+VH
Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237



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>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)|
          Length = 1220

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -1

Query: 191 TTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRFIVTDGEAGPG 33
           TT  S  N  A   S    +P    +  G +GRP + P+ W   +   + GPG
Sbjct: 813 TTTSSYDN--AIFNSQFNKAPGSDDEEGGNLGRPIENPKTWVISIEVEDTGPG 863



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>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)|
          Length = 292

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 91  GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 264
           G   P  + YLK  L   +     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,416,951
Number of Sequences: 219361
Number of extensions: 1140744
Number of successful extensions: 4473
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4467
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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