ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481558.1| Oryza sativa (japonica cultivar-group), mRNA 466 e-128
2dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 341 1e-90
4dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic D... 341 1e-90
5ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
6ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
7ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
8ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
9ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
10ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
11ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
12ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
13ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.35
14gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
16gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, c... 42 1.4
17ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle be... 40 5.5
18gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 5.5
19gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.5
20ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (i... 40 5.5
21ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (incl... 40 5.5
22gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome... 40 5.5
23gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosom... 40 5.5
24gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosom... 40 5.5
25gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, com... 40 5.5
26emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.5
27gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, co... 40 5.5
28dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.5
29dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B... 40 5.5
30emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in... 40 5.5
31gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194... 40 5.5
32dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 40 5.5
33gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 5.5
34emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-4... 40 5.5
35gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, com... 40 5.5
36gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.5
37emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 5.5
38dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocyt... 40 5.5
39emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2... 40 5.5
40gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds 40 5.5
41gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec... 40 5.5 
>ref|XM_481558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  466 bits (235), Expect = e-128
 Identities = 298/319 (93%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcatcttcgacggcctcccaattccgccagacaaatcttacctgaaggaagggctgtcgc 139
           ||||||||||||||||||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 26  gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 85

                                                                       
Query: 140 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 199
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 86  ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 145

                                                                       
Query: 200 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 259
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 205

                                                                       
Query: 260 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaaggccatacaga 319
           |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 206 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaaggccatccaga 265

                                                                       
Query: 320 actactcccatatcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagg 379
           |||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 266 actactcccagatcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagg 325

                              
Query: 380 gggagatggcagaggccaa 398
           |||||||||| ||||||||
Sbjct: 326 gggagatggccgaggccaa 344
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>dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E23, full
           insert sequence
          Length = 3546

 Score =  466 bits (235), Expect = e-128
 Identities = 298/319 (93%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcatcttcgacggcctcccaattccgccagacaaatcttacctgaaggaagggctgtcgc 139
           ||||||||||||||||||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 111 gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 170

                                                                       
Query: 140 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 199
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 171 ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 230

                                                                       
Query: 200 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 259
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 290

                                                                       
Query: 260 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaaggccatacaga 319
           |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 291 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaaggccatccaga 350

                                                                       
Query: 320 actactcccatatcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagg 379
           |||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 351 actactcccagatcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagg 410

                              
Query: 380 gggagatggcagaggccaa 398
           |||||||||| ||||||||
Sbjct: 411 gggagatggccgaggccaa 429
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  341 bits (172), Expect = 1e-90
 Identities = 202/212 (95%)
 Strand = Plus / Minus

                                                                            
Query: 118      tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 177
                ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 13758055 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 13757996

                                                                            
Query: 178      ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 237
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 13757995 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 13757936

                                                                            
Query: 238      aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 297
                |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 13757935 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 13757876

                                                
Query: 298      ggcttcaacaaggccatacagaactactccca 329
                ||||||||||||||||| ||||||||||||||
Sbjct: 13757875 ggcttcaacaaggccatccagaactactccca 13757844



 Score =  103 bits (52), Expect = 4e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                            
Query: 331      atcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagggggagatggca 390
                ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| 
Sbjct: 13757719 atcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagggggagatggcc 13757660

                        
Query: 391      gaggccaa 398
                ||||||||
Sbjct: 13757659 gaggccaa 13757652
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>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0406D01
          Length = 163932

 Score =  341 bits (172), Expect = 1e-90
 Identities = 202/212 (95%)
 Strand = Plus / Minus

                                                                         
Query: 118   tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 177
             ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 72124 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 72065

                                                                         
Query: 178   ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 237
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72064 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 72005

                                                                         
Query: 238   aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 297
             |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 72004 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 71945

                                             
Query: 298   ggcttcaacaaggccatacagaactactccca 329
             ||||||||||||||||| ||||||||||||||
Sbjct: 71944 ggcttcaacaaggccatccagaactactccca 71913



 Score =  103 bits (52), Expect = 4e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                         
Query: 331   atcctgcggctgttcagcgagtccgccgagagcatcaccggcctcaagggggagatggca 390
             ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| 
Sbjct: 71788 atcctgcggctgttcagcgagtctgcggagagcatcaccgggctcaagggggagatggcc 71729

                     
Query: 391   gaggccaa 398
             ||||||||
Sbjct: 71728 gaggccaa 71721
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>ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 3 (LOC490734), mRNA
          Length = 7482

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 1 (LOC490734), mRNA
          Length = 6473

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 10 (LOC490734), mRNA
          Length = 7497

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 9 (LOC490734), mRNA
          Length = 7587

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 8 (LOC490734), mRNA
          Length = 7488

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 7 (LOC490734), mRNA
          Length = 7494

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 6 (LOC490734), mRNA
          Length = 7434

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 5 (LOC490734), mRNA
          Length = 7692

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 430 tccagttcctcaaggagcagag 451
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>ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 4 (LOC490734), mRNA
          Length = 3721

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 227 tccagttcctcaaggagcagag 248
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 258     cgaggacgtcgttgacgaggtcgtc 282
               |||||||||||| ||||||||||||
Sbjct: 4874049 cgaggacgtcgtggacgaggtcgtc 4874025
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 237     caaggagcagagcgacctcatcgaggacg 265
               |||||||||| ||| ||||||||||||||
Sbjct: 1077901 caaggagcagcgcgccctcatcgaggacg 1077929
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>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds
          Length = 5163

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 atcgaggacgtcgttgacgag 276
           |||||||||||||||||||||
Sbjct: 511 atcgaggacgtcgttgacgag 531
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>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin
           (LOC452970), mRNA
          Length = 7365

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 494 tccagttcctcaaggagcag 513
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2008732 ctcacctccatggaccgcgatggc 2008755
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 238     aaggagcagagcgacctcatcgag 261
               |||||||||||||||| |||||||
Sbjct: 1104154 aaggagcagagcgaccgcatcgag 1104177
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>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 1, mRNA
          Length = 10064

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
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>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 2, mRNA
          Length = 6695

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
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>gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome 9, complete sequence
          Length = 176541

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    agacaaatcttacctgaaggaagg 131
              ||||| ||||||||||||||||||
Sbjct: 172864 agacacatcttacctgaaggaagg 172841
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>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence
          Length = 194892

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 372   cctcaagggggagatggcagaggccaaa 399
             ||||||||||||||| || |||||||||
Sbjct: 21805 cctcaagggggagatagctgaggccaaa 21778
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>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence
          Length = 136592

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   agacaaatcttacctgaaggaagg 131
             ||||| ||||||||||||||||||
Sbjct: 63560 agacacatcttacctgaaggaagg 63537
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>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence
          Length = 230218

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 372    cctcaagggggagatggcagaggccaaa 399
              ||||||||||||||| || |||||||||
Sbjct: 117851 cctcaagggggagatagctgaggccaaa 117878
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cgtcgttgacgaggtcgtcc 283
              ||||||||||||||||||||
Sbjct: 232835 cgtcgttgacgaggtcgtcc 232816
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>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence
          Length = 172626

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tccagttcctcaaggagcag 246
              ||||||||||||||||||||
Sbjct: 108238 tccagttcctcaaggagcag 108257
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     taccaccatggcttcaacaa 308
               ||||||||||||||||||||
Sbjct: 3021626 taccaccatggcttcaacaa 3021607
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>dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B, partial cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 259 gaggacgtcgttgacgaggtcgtc 282
           ||||||||||| ||||||||||||
Sbjct: 316 gaggacgtcgtcgacgaggtcgtc 339
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>emb|BX294659.9| Zebrafish DNA sequence from clone DKEYP-15D12 in linkage group 12,
             complete sequence
          Length = 171920

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gggagatggcagaggccaaa 399
             ||||||||||||||||||||
Sbjct: 97266 gggagatggcagaggccaaa 97247
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>gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194 of 195 of the
           complete sequence
          Length = 10552

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 199 ctcacctccaaggaccgcgatggc 222
           |||||||||| |||||||||||||
Sbjct: 351 ctcacctccatggaccgcgatggc 328
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     ccatggcttcaacaaggcca 313
               ||||||||||||||||||||
Sbjct: 3095312 ccatggcttcaacaaggcca 3095293
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2025391 ctcacctccatggaccgcgatggc 2025414
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>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171030

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   tccagttcctcaaggagcag 246
             ||||||||||||||||||||
Sbjct: 30244 tccagttcctcaaggagcag 30263
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>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence
          Length = 207069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cttcaacaaggccatacaga 319
              ||||||||||||||||||||
Sbjct: 184976 cttcaacaaggccatacaga 184957
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 241   gagcagagcgacctcatcgaggacgtcg 268
             |||||||||| | |||||||||||||||
Sbjct: 62180 gagcagagcggcttcatcgaggacgtcg 62153
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     ctcacctccaaggaccgcgatggc 222
               |||||||||| |||||||||||||
Sbjct: 2022510 ctcacctccatggaccgcgatggc 2022533
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>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes
           spherocytosis, clinical type I) variant protein
          Length = 7481

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 502 tccagttcctcaaggagcag 521
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>emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2300N4 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 118332

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tccagttcctcaaggagcag 246
              ||||||||||||||||||||
Sbjct: 114819 tccagttcctcaaggagcag 114838
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>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds
          Length = 6765

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 454 tccagttcctcaaggagcag 473
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>gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec.4 exon sequence
          Length = 348

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 tccagttcctcaaggagcag 246
           ||||||||||||||||||||
Sbjct: 125 tccagttcctcaaggagcag 144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,004,184
Number of Sequences: 3902068
Number of extensions: 3004184
Number of successful extensions: 55856
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55463
Number of HSP's gapped (non-prelim): 393
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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