ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl18d10 |
|---|---|
| Clone Library Name | barley_pub |
>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3| Length = 847 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/80 (33%), Positives = 41/80 (51%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHR 323 +A V+ K+GG L E + GV DL+ + EL + +L+D+ A + Sbjct: 3 DAVTGFVLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEA-----REREDEV 57 Query: 324 MKDWMKQIRDITYDIEDCID 383 K+W K + DI YDIED +D Sbjct: 58 SKEWTKLVLDIAYDIEDVLD 77
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHR 323 +A + V+GK+G L +E ++ V DL+ + EL + +L+D+ A + Sbjct: 3 DAITEFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEA-----REREDEV 57 Query: 324 MKDWMKQIRDITYDIEDCID 383 K+W K + D YD+ED +D Sbjct: 58 SKEWSKLVLDFAYDVEDVLD 77
>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180| Length = 839 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/81 (30%), Positives = 44/81 (54%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA + + KLG LL +E + G+ ++ + DEL + FL+D A Q Sbjct: 2 AEAIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKD-----ADEKQHESE 56 Query: 321 RMKDWMKQIRDITYDIEDCID 383 R+++W+ IR+ +YD ED ++ Sbjct: 57 RVRNWVAGIREASYDAEDILE 77
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 47.8 bits (112), Expect = 6e-06 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHR 323 +A + V+GK+ L +E ++ GV DL+ + EL +Q +L+++ Sbjct: 3 DAITEFVVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEV-----CDKEDEV 57 Query: 324 MKDWMKQIRDITYDIEDCID 383 K+W K + DI YD+ED +D Sbjct: 58 SKEWTKLVLDIAYDVEDVLD 77
>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas| syringae protein 3) Length = 926 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGA-GRAQTHG 317 + AT+ +G++ +L E L+ GV+G++ + EL M+SFL D G G T Sbjct: 2 ASATVDFGIGRILSVLENETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGGNGSTTTTT 61 Query: 318 HRMKDWMKQIRDITYDIEDCIDD 386 + ++ RD+ Y IED +D+ Sbjct: 62 QLFQTFVANTRDLAYQIEDILDE 84
>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780| Length = 906 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/71 (35%), Positives = 40/71 (56%) Frame = +3 Query: 171 KLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHRMKDWMKQIR 350 KL LL+QEY +GV + + D+L + +FL D A RA ++ +++I+ Sbjct: 17 KLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADAKKQTRALA-----RNCLEEIK 71 Query: 351 DITYDIEDCID 383 +ITYD ED I+ Sbjct: 72 EITYDAEDIIE 82
>DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602| Length = 1138 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/73 (32%), Positives = 41/73 (56%) Frame = +3 Query: 165 MGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHRMKDWMKQ 344 + KL LL+ EYTL +GV + + +L ++SFL+D A A ++ +++ Sbjct: 10 VNKLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLKDADAKKHTSA-----LVRYCVEE 64 Query: 345 IRDITYDIEDCID 383 I+DI YD ED ++ Sbjct: 65 IKDIVYDAEDVLE 77
>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2| Length = 1271 Score = 40.8 bits (94), Expect = 8e-04 Identities = 21/81 (25%), Positives = 45/81 (55%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA + + KL LL++E + G++ + + +L +QS L+D A + Sbjct: 2 AEAVVSFGVEKLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLKDADA-----KKNETE 56 Query: 321 RMKDWMKQIRDITYDIEDCID 383 R++++++ ++DI YD +D I+ Sbjct: 57 RVRNFLEDVKDIVYDADDIIE 77
>RP8L1_ARATH (O04093) Putative disease resistance protein RPP8-like protein 1| Length = 821 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/71 (29%), Positives = 38/71 (53%) Frame = +3 Query: 171 KLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHRMKDWMKQIR 350 KL LL +E + G+ + + +L +QS L+D A + R++++++ +R Sbjct: 12 KLWELLNRESARLNGIGEQVDGLKRQLGRLQSLLKDADA-----KKHESERVRNFLEDVR 66 Query: 351 DITYDIEDCID 383 DI YD ED I+ Sbjct: 67 DIVYDAEDIIE 77
>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)| Length = 1025 Score = 38.9 bits (89), Expect = 0.003 Identities = 19/82 (23%), Positives = 44/82 (53%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA ++ V+ L L E L+ G + Q ++ +++Q+ L D A Q + Sbjct: 2 AEAFIQVVLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLED-----AQEKQLNDK 56 Query: 321 RMKDWMKQIRDITYDIEDCIDD 386 +++W++++ TY+++D +D+ Sbjct: 57 PLENWLQKLNAATYEVDDILDE 78
>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L| Length = 899 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/71 (30%), Positives = 37/71 (52%) Frame = +3 Query: 171 KLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHRMKDWMKQIR 350 KL L+QEY +GV + + L ++SFL+D A + ++ +++I+ Sbjct: 10 KLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKD-----ADAKKHISEMVRHCVEEIK 64 Query: 351 DITYDIEDCID 383 DI YD ED I+ Sbjct: 65 DIVYDTEDIIE 75
>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight| resistance protein RPI) Length = 970 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/82 (21%), Positives = 44/82 (53%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA ++ ++ L L E L+ G + Q ++ +++Q+ L D A Q + Sbjct: 2 AEAFIQVLLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLED-----AQEKQLNNK 56 Query: 321 RMKDWMKQIRDITYDIEDCIDD 386 +++W++++ TY+++D +D+ Sbjct: 57 PLENWLQKLNAATYEVDDILDE 78
>DRL8_ARATH (Q8W3K3) Putative disease resistance protein At1g58400| Length = 910 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/80 (27%), Positives = 40/80 (50%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHR 323 EA + + KL L QEY +GV + + L ++SFL+D A + Sbjct: 3 EAIVSFGVEKLWDRLTQEYEQFQGVEDRIAELKSNLNLLKSFLKDAEA-----KKNTSQM 57 Query: 324 MKDWMKQIRDITYDIEDCID 383 ++ +++I++I YD E+ I+ Sbjct: 58 VRHCVEEIKEIVYDTENMIE 77
>YSCK_YERPS (P69975) Yop proteins translocation protein K (Low calcium response| locus protein KB) Length = 209 Score = 35.0 bits (79), Expect = 0.043 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -2 Query: 319 WPWVWARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARR-----PPSLPMTDF 155 WP W RP PT + SR + S L +W + + P+ + +W +R P + P + Sbjct: 126 WPTHWQRPLPTEIESR----TMIQSGLAFWLAAMEPQPQ--AWCKRLSLRLPLATPSEPW 179 Query: 154 IVA-SEAPTTSSM 119 +VA S+ P ++ Sbjct: 180 LVAESQRPLAQTL 192
>YSCK_YERPE (P69974) Yop proteins translocation protein K (Low calcium response| locus protein KB) Length = 209 Score = 35.0 bits (79), Expect = 0.043 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -2 Query: 319 WPWVWARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARR-----PPSLPMTDF 155 WP W RP PT + SR + S L +W + + P+ + +W +R P + P + Sbjct: 126 WPTHWQRPLPTEIESR----TMIQSGLAFWLAAMEPQPQ--AWCKRLSLRLPLATPSEPW 179 Query: 154 IVA-SEAPTTSSM 119 +VA S+ P ++ Sbjct: 180 LVAESQRPLAQTL 192
>YSCK_YEREN (Q01252) Yop proteins translocation protein K| Length = 209 Score = 35.0 bits (79), Expect = 0.043 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -2 Query: 319 WPWVWARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARR-----PPSLPMTDF 155 WP W RP PT + SR + S L +W + + P+ + +W +R P + P + Sbjct: 126 WPTNWQRPLPTEIESR----TMIQSGLAFWLAAMEPQPQ--AWCKRLSLRLPLATPSEPW 179 Query: 154 IVA-SEAPTTSSM 119 +VA S+ P ++ Sbjct: 180 LVAESQRPLAQTL 192
>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb)| (Blight resistance protein B149) Length = 947 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/82 (20%), Positives = 41/82 (50%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA ++ ++ L + E L+ G + + ++ + +Q+ L D A Q Sbjct: 2 AEAFLQVLLDNLTFFIQGELGLVFGFEKEFKKLSSMFSMIQAVLED-----AQEKQLKYK 56 Query: 321 RMKDWMKQIRDITYDIEDCIDD 386 +K+W++++ Y+++D +DD Sbjct: 57 AIKNWLQKLNVAAYEVDDILDD 78
>RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb)| Length = 988 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/82 (17%), Positives = 42/82 (51%) Frame = +3 Query: 141 SEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 +EA ++ ++ L + + LI G + + ++ +++Q+ L+D A Q Sbjct: 2 AEAFLQVLLENLTSFIGDKLVLIFGFEKECEKLSSVFSTIQAVLQD-----AQEKQLKDK 56 Query: 321 RMKDWMKQIRDITYDIEDCIDD 386 +++W++++ Y+++D + + Sbjct: 57 AIENWLQKLNSAAYEVDDILGE 78
>R13L4_ARATH (Q38834) Putative disease resistance RPP13-like protein 4| Length = 852 Score = 31.2 bits (69), Expect = 0.62 Identities = 19/81 (23%), Positives = 38/81 (46%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHR 323 +A + + K +L ++ + L+ + EL MQSFL+D A R + Sbjct: 3 DAVVTVFLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKD-----AERQKRTNET 57 Query: 324 MKDWMKQIRDITYDIEDCIDD 386 ++ + +R++ Y+ ED + D Sbjct: 58 LRTLVADLRELVYEAEDILVD 78
>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1250 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -2 Query: 238 MYWRSPLTPRIRVYSWARRPPSLPMTDFIVASEAPTTSSMAAGLAVPLP-IEESSAQ 71 +Y++ P + WA PPS + S +T+S + V LP I++S++Q Sbjct: 1057 LYYKCPKPDECNFFQWADEPPSSAKSKNSTGSAPQSTTSWGSNRVVTLPSIQQSNSQ 1113
>HOXE_CHICK (Q91975) Homeobox protein CHOX-E (CHOX E) (Fragment)| Length = 157 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 109 LAVPLPIEESSAQIWVENRG*LSWNGLGEAEILS 8 LA+ L ++ES +IW +NR + W E E+LS Sbjct: 42 LAINLGLKESQVKIWFQNRR-MKWRNSKEKEVLS 74
>GRHPR_HUMAN (Q9UBQ7) Glyoxylate reductase/hydroxypyruvate reductase (EC| 1.1.1.79) Length = 328 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +3 Query: 3 ASLKISA------SPNPFQLNHPLFSTQICAELSSIGKGTAR 110 AS KI+A SP P NHPL + + C L IG T R Sbjct: 259 ASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHR 300
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/56 (25%), Positives = 25/56 (44%) Frame = -2 Query: 319 WPWVWARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARRPPSLPMTDFI 152 WP + P A + C+ ++ +M++ T R Y+W RR P D++ Sbjct: 238 WPAIVIDPMTQAPELVLRSCIPDAACVMFFGHSGTENERDYAWVRRGMIFPFVDYV 293
>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1| Length = 1054 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 249 LASMQSFLRDLTAV--GAGRAQTHGHRMKDWMKQIRDITYDIEDCIDDSA 392 L + + L +TAV A Q ++ W+ ++RD+ Y ED +DD A Sbjct: 39 LERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIA 88
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -2 Query: 298 PAPTAVRSRRKDCMLASSSLMYWRSPL-TPRIRVYSWARRPPSLPMTDFIVASEAPTTSS 122 P P++ + + SS+ +P+ TP + P P + +S AP TSS Sbjct: 486 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSS 545 Query: 121 MAAGLAVPLPIEESS 77 + P+P SS Sbjct: 546 TTESSSAPVPTPSSS 560
>CTTB2_HORSE (Q2QLA2) Cortactin-binding protein 2 (CortBP2)| Length = 1665 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +2 Query: 170 QAGRPPRPGVHPDSGRQRRPPV 235 QAG PPRPGV P PPV Sbjct: 504 QAGAPPRPGVSPTGDVGTYPPV 525
>CR7AB_BACUA (Q45707) Pesticidal crystal protein cry7Ab (Insecticidal| delta-endotoxin CryVIIA(b)) (Crystaline entomocidal protoxin) (130 kDa crystal protein) Length = 1138 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Frame = +3 Query: 78 ELSSIGKGTARPAAMELVVGASEATMKSVMGKLGGLLAQEYTL----IRGVNGDLQ-YIN 242 +LS++ KG +LV S + + + L+Q+Y + V+G +IN Sbjct: 510 DLSTVVKGPGFTGG-DLVKRGSNGYIGDIKATVNSPLSQKYRVRVRYATSVSGLFNVFIN 568 Query: 243 DELASMQSFLRDLTAVGAGRAQTHG 317 DE+A ++F + +G G+ T+G Sbjct: 569 DEIALQKNFQSTVETIGEGKDLTYG 593
>CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-I chitin synthase 2) Length = 928 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 161 RHGQAGRPPRPGVHPDSGRQRRPPVH 238 R GRP +P +HPD R+ P+H Sbjct: 26 RSPSPGRPLQPYIHPDEAYARQQPLH 51
>ATR_MOUSE (Q9JKK8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein) Length = 2635 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +3 Query: 144 EATMKSVMGKLGGLLAQEYTLIR-GVNGDLQYINDELASMQSFLRDLTAVGAGRAQTH 314 E +K+V+G L L+ +R +G+++YI + L S F+++L + A TH Sbjct: 799 EREVKAVLGTLLNLMEDPDKDVRIAFSGNIKYILESLNSEDGFVKELFVLRMKEAYTH 856
>YK69_YEAST (P36165) Hypothetical 102.7 kDa protein in PRP16-SRP40 intergenic| region Length = 910 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +3 Query: 57 FSTQICAELSSIGKGTARPAAMELVVGASEATMKSVMGKLGGLLAQEYTLIRGVNGDLQY 236 FS ++ LSSI A A L +G+ K+ + KL +L+Q+Y +GD+ Sbjct: 519 FSARLKQNLSSIYNFMANEAIHILEIGSEMGIAKNALTKLRSVLSQQY------SGDITI 572 Query: 237 IND 245 + D Sbjct: 573 LPD 575
>KUP2_BIFLO (Q8G7Q3) Probable potassium transport system protein kup 2| Length = 736 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -2 Query: 259 MLASSSLMYWRSPLTPRIRV---YSWARRPPSLPMTDFIVASEAPT-TSSMAAGLAVPLP 92 M S + +P P + V + RRPP L TD PT T ++A AVP P Sbjct: 614 MAGSPVKWFGLAPYNPLVEVQPLFVSTRRPPRLKRTDTAKTIPTPTPTRAVADPAAVPDP 673 Query: 91 IEESS 77 ++ +S Sbjct: 674 MDTTS 678
>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +2 Query: 170 QAGRPPRPGVHPDSGRQRRPPVHQRRAGQHAV 265 QAG P RPGV P PPV + H V Sbjct: 503 QAGAPSRPGVPPTGDVGTHPPVGRTSLKTHGV 534
>MAX2_ORYSA (Q5VMP0) F-box/LRR-repeat MAX2 homolog (F-box and leucine-rich| repeat MAX2 homolog) Length = 720 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = -2 Query: 298 PAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARRPPSLP 167 PA T++ +D ++ +W++ L R+++ W +RPP+LP Sbjct: 144 PAVTSLAVYCRDPTTLANLTPHWQASLR-RVKLVRWHQRPPTLP 186
>VE4_BPV4 (P08347) Probable protein E4| Length = 107 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 179 RPPRPGVHPDSGRQRRPPVHQRRAGQHA 262 R P+PG P+ R PP+ QRR G A Sbjct: 22 RVPKPGTQPEDDDDR-PPIFQRRPGPAA 48
>GATA_MYCTU (O53258) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 494 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3 Query: 102 TARPAAMELVVGASEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDL 281 T+ A + VVGA+ A G +G L ++R ++G Y LAS ++ + L Sbjct: 241 TSVDAEVPDVVGAARA------GAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQL 294 Query: 282 TAVGA 296 TA+GA Sbjct: 295 TALGA 299
>GATA_MYCBO (Q7TXG2) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 494 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3 Query: 102 TARPAAMELVVGASEATMKSVMGKLGGLLAQEYTLIRGVNGDLQYINDELASMQSFLRDL 281 T+ A + VVGA+ A G +G L ++R ++G Y LAS ++ + L Sbjct: 241 TSVDAEVPDVVGAARA------GAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQL 294 Query: 282 TAVGA 296 TA+GA Sbjct: 295 TALGA 299
>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)| (Trithorax-homolog protein 3) (TRX-homolog protein 3) (Protein SET DOMAIN GROUP 14) Length = 902 Score = 28.1 bits (61), Expect = 5.3 Identities = 26/107 (24%), Positives = 41/107 (38%) Frame = -2 Query: 328 FIRWPWVWARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARRPPSLPMTDFIV 149 F WP V P A K C+ + +M++ R Y+W R+ P T+F+ Sbjct: 201 FPAWPAVVIDPISQAPDGVLKHCVPGAICVMFFGYSKDGTQRDYAWVRQGMVYPFTEFMD 260 Query: 148 ASEAPTTSSMAAGLAVPLPIEESSAQIWVENRG*LSWNGLGEAEILS 8 + T +EE+ + EN G+AEI+S Sbjct: 261 KFQDQTNLFNYKASEFNKALEEA---VLAEN------GNFGDAEIIS 298
>PRKDC_XENLA (Q9DEI1) DNA-dependent protein kinase catalytic subunit (EC| 2.7.11.1) (DNA-PK catalytic subunit) (DNA-PKcs) Length = 4146 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/46 (28%), Positives = 29/46 (63%) Frame = +3 Query: 219 NGDLQYINDELASMQSFLRDLTAVGAGRAQTHGHRMKDWMKQIRDI 356 NG+++ + A++ SFL+ + + A A+TH +++ +M+Q +I Sbjct: 325 NGEMKKL--AFAALDSFLKQIAHLVASDAETHKNKLHFFMEQFYEI 368
>ACLY_CAEEL (P53585) Probable ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1106 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 81 LSSIGKGTARPAAMELVVGASEATMKSVMGKLGGLLAQEYTLI 209 LS + +GT RP L++G S A +V GG++ T + Sbjct: 335 LSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETFV 377
>HMX3_MOUSE (P42581) Homeobox protein HMX3 (Homeobox protein Nkx-5.1)| Length = 458 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 Query: 130 TSSMAAGLAVPLPIEESSAQIWVENR 53 +SS AGLA L + E+ +IW +NR Sbjct: 355 SSSERAGLAASLHLTETQVKIWFQNR 380
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = +2 Query: 170 QAGRPPRPGVHPDSGRQRRPPVHQRRAGQHAV 265 QAG PPRPG P P V + H + Sbjct: 502 QAGAPPRPGAPPTGDVSTHPSVGRTSVKTHGI 533
>STX5_RAT (Q08851) Syntaxin-5| Length = 301 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%) Frame = +3 Query: 3 ASLKISASPNPFQLNHP-LFSTQICAELSSIGKGTARPAAMELVVGASEATMKSVMGKLG 179 A + + N Q N P L +T+ C+E + + AR +L ++ +++ K Sbjct: 13 ACKSLQSRQNGIQTNKPALHATRQCSEFTLM----ARRIGKDLSNTFAKLEKLTILAKRK 68 Query: 180 GLL------AQEYTLIRGVNGDLQYINDELASMQSFLRDLTAVGAGRAQTHGH 320 L +E T I + D+ +N ++A +Q F+R + QTH + Sbjct: 69 SLFDDKAVEIEELTYI--IKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSN 119
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +2 Query: 167 GQAGRPPRPGVHPDSGRQRRPPVHQR 244 G P R G P GRQ PP HQ+ Sbjct: 229 GHPKPPHRGGGEPRGGRQHHPPYHQQ 254
>YG5M_YEAST (P40325) Protein YGR268C| Length = 198 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 149 DDEVRHGQAGRPPRPGVHPDSGRQRRPPVHQR 244 ++E Q RPPRP + G Q RP HQR Sbjct: 19 EEERLQSQPPRPPRPAANLAQGHQSRP--HQR 48
>THIC_MYCLE (Q9ZBL0) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 152 DEVRHGQAGRPPRPGVHPDSGRQRRPPVHQRRAGQ 256 D V + AG PPRPGV D G Q + + RAG+ Sbjct: 65 DAVINLTAGLPPRPGVIRDRGTQ----LQRARAGE 95
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = +2 Query: 182 PPRPGVHPDSGRQRRPP---VHQRRAGQH 259 PP PGVHP + PP VH + G H Sbjct: 363 PPAPGVHPPAPGVHPPPSAGVHPQAPGVH 391
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = +2 Query: 182 PPRPGVHPDSGRQRRPP---VHQRRAGQH 259 PP PGVHP + PP VH + G H Sbjct: 352 PPAPGVHPPAPGVHPPPSAGVHPQAPGVH 380
>DNAJ_CHRVO (Q7NXI1) Chaperone protein dnaJ| Length = 375 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 Query: 261 QSFLRDLTAVGAGRAQTHGHRMKDWMKQIRD 353 + LR+ A+ G TH R K +M ++RD Sbjct: 342 KELLREFEAISQGDVATHNPRSKSFMDKLRD 372
>CTTB2_CALMO (Q2QLB3) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 170 QAGRPPRPGVHPDSGRQRRPPVHQRRAGQHAV 265 QAG PPRPG P P V + H V Sbjct: 503 QAGAPPRPGAPPTGDVGTHPSVGRTSVKTHGV 534
>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)| Length = 405 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 Query: 130 TSSMAAGLAVPLPIEESSAQIWVENR 53 +SS AGLA L + E+ +IW +NR Sbjct: 279 SSSERAGLAANLHLTETQVKIWFQNR 304
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = -2 Query: 304 ARPAPTAVRSRRKDCMLASSSLMYWRSPLTPRIRVYSWARRPPSLPMTDFIVASEAP 134 AR + ++ RSR C +S S WRSP R A P T + AS +P Sbjct: 86 ARSSGSSRRSRSSGCSRSSRSCSCWRSPCGSRC-----APPAPRATATSAVTASCSP 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,101,013 Number of Sequences: 219361 Number of extensions: 722271 Number of successful extensions: 3482 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 3266 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3472 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
