ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 254 6e-65
2gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 254 6e-65
3gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 82 5e-13
4gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 82 5e-13
5gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 82 5e-13
6ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 72 4e-10
7gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 72 4e-10
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 4e-10
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 4e-10
10gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 72 4e-10
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.10
12emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on ch... 42 0.40
13ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predic... 40 1.6
14ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative... 40 1.6
15ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.6
16gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.6
17ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM044... 40 1.6
18emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 40 1.6
19gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 40 1.6
20emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,... 40 1.6
21gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 40 1.6
22gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Can... 40 1.6
23gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 1.6
24gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A... 40 1.6
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
27dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
28dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
32dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
33dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
34dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 1.6
35dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
36dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
37dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.6
38gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.6
39gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 1.6
40emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4,... 40 1.6
41gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 38 6.2
42ref|XM_416704.1| PREDICTED: Gallus gallus similar to Protein C21... 38 6.2
43gb|AY554355.1| Takifugu rubripes claudin 11b (cldn11b) gene, com... 38 6.2
44gb|AY271304.1| Haemaphysalis longicornis calreticulin mRNA, comp... 38 6.2
45gb|AC122800.3| Mus musculus BAC clone RP23-451G9 from chromosome... 38 6.2
46gb|AY364178.1| Hyperolius sp. FB-2003 CXCR4 gene, partial cds 38 6.2
47ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
48ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
49ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
50ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
51ref|XM_851231.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
52ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
53ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
54ref|XM_851109.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
55ref|XM_851062.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
56ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin,... 38 6.2
57gb|AC101709.11| Mus musculus chromosome 10, clone RP23-271A21, c... 38 6.2
58emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 38 6.2
59gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence 38 6.2
60gb|AY395260.1| Haemaphysalis longicornis calreticulin gene, comp... 38 6.2
61dbj|AK089350.1| Mus musculus B6-derived CD11 +ve dendritic cells... 38 6.2
62dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
63dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
64gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromos... 38 6.2
65gb|AC010731.3| Homo sapiens BAC clone RP11-363B11 from 2, comple... 38 6.2
66gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, comple... 38 6.2
67gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome... 38 6.2
68gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Can... 38 6.2
69gb|AC012305.7| Homo sapiens BAC clone RP11-84G18 from 2, complet... 38 6.2
70dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
71dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
72dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, ... 38 6.2
73dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, ... 38 6.2
74dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 6.2
75gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, co... 38 6.2
76dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
77dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 38 6.2 
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  254 bits (128), Expect = 6e-65
 Identities = 131/132 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 3526

                                                                        
Query: 61   ctaatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 120
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 ctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 3586

                        
Query: 121  atgcgcaagaac 132
            ||||||||||||
Sbjct: 3587 atgcgcaagaac 3598
to top
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  254 bits (128), Expect = 6e-65
 Identities = 131/132 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  cattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggaggg 83

                                                                       
Query: 61  ctaatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  ctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgctc 143

                       
Query: 121 atgcgcaagaac 132
           ||||||||||||
Sbjct: 144 atgcgcaagaac 155
to top
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 76  acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           |||||||||||||||   || ||||||||||||||||||||||||||||||||||||
Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaac 232
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 76  acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           |||||||||||||||   || ||||||||||||||||||||||||||||||||||||
Sbjct: 28  acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaac 84
to top
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 76  acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           |||||||||||||||   || ||||||||||||||||||||||||||||||||||||
Sbjct: 90  acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaac 146
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 97  cggctcaagggcacggtggtgctcatgcgcaagaac 132
           ||||||||||||||||||||||||||||||||||||
Sbjct: 49  cggctcaagggcacggtggtgctcatgcgcaagaac 84
to top
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                 
Query: 97    cggctcaagggcacggtggtgctcatgcgcaagaac 132
             ||||||||||||||||||||||||||||||||||||
Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaac 42919
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 97       cggctcaagggcacggtggtgctcatgcgcaagaac 132
                ||||||||||||||||||||||||||||||||||||
Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaac 27798789



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 85       aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
                ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 30023340



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 20262030 gagaggaggccaagaacaag 20262049
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 97       cggctcaagggcacggtggtgctcatgcgcaagaac 132
                ||||||||||||||||||||||||||||||||||||
Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaac 27890113



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 85       aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
                ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 30114762



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 20255059 gagaggaggccaagaacaag 20255078
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                 
Query: 97    cggctcaagggcacggtggtgctcatgcgcaagaac 132
             ||||||||||||||||||||||||||||||||||||
Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaac 15104
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 100     ctcaagggcacggtggtgctca 121
               ||||||||||||||||||||||
Sbjct: 1464951 ctcaagggcacggtggtgctca 1464930
to top
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the
             gene for neuropeptide FF 1; RFamide-related peptide
             receptor (OT7T022), the 3' end of a novel gene (FLJ10751)
             and two CpG islands, complete sequence
          Length = 80236

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    gaggagaggaggccaagaaca 43
             |||||||||||||||||||||
Sbjct: 46254 gaggagaggaggccaagaaca 46274
to top
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   gagaggaggccaagaacaag 45
            ||||||||||||||||||||
Sbjct: 1601 gagaggaggccaagaacaag 1620
to top
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor
            (OSJNBa0011L09.15), mRNA
          Length = 3339

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   gagaggaggccaagaacaag 45
            ||||||||||||||||||||
Sbjct: 1352 gagaggaggccaagaacaag 1371
to top
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 85  aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 34  aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 81
to top
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 53789 gagaggaggccaagaacaag 53770
to top
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA
          Length = 5223

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   gaggaggccaagaacaagat 47
            ||||||||||||||||||||
Sbjct: 4795 gaggaggccaagaacaagat 4814
to top
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 85  aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 178
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 85    aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
             ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 84411
to top
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
              complete sequence
          Length = 130433

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     gagaggaggccaagaacaag 45
              ||||||||||||||||||||
Sbjct: 126301 gagaggaggccaagaacaag 126282
to top
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete
             sequence
          Length = 177565

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 85112 gagaggaggccaagaacaag 85093
to top
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202745

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     gaggagaggaggccaagaac 42
              ||||||||||||||||||||
Sbjct: 139186 gaggagaggaggccaagaac 139205
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 100     ctcaagggcacggtggtgct 119
               ||||||||||||||||||||
Sbjct: 2352289 ctcaagggcacggtggtgct 2352308
to top
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete
             sequence
          Length = 156929

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 57337 gagaggaggccaagaacaag 57356
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 26      gagaggaggccaagaacaag 45
               ||||||||||||||||||||
Sbjct: 8315788 gagaggaggccaagaacaag 8315769
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 11856616 gagaggaggccaagaacaag 11856597
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 12678450 gagaggaggccaagaacaag 12678469
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      gagaggaggccaagaacaag 45
               ||||||||||||||||||||
Sbjct: 9257767 gagaggaggccaagaacaag 9257786
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 12246668 gagaggaggccaagaacaag 12246687
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 23122014 gagaggaggccaagaacaag 23121995
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 27388692 gagaggaggccaagaacaag 27388711
to top
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0014E08
          Length = 144219

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 71587 gagaggaggccaagaacaag 71606
to top
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0063G05
          Length = 182681

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     gagaggaggccaagaacaag 45
              ||||||||||||||||||||
Sbjct: 169209 gagaggaggccaagaacaag 169228
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 95      cccggctcaagggcacggtggtgc 118
               |||||||||| |||||||||||||
Sbjct: 5837219 cccggctcaacggcacggtggtgc 5837242
to top
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1742_G01
          Length = 154912

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 83058 gagaggaggccaagaacaag 83077
to top
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1010G04a
          Length = 61450

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 27331 gagaggaggccaagaacaag 27350
to top
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 85  aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaac 132
           ||||||| |||||| ||||||||| |  | || |||||||||||||||
Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaac 196
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 12685790 gagaggaggccaagaacaag 12685809
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       gagaggaggccaagaacaag 45
                ||||||||||||||||||||
Sbjct: 11856287 gagaggaggccaagaacaag 11856268
to top
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17,
             complete sequence
          Length = 99093

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    gagaggaggccaagaacaag 45
             ||||||||||||||||||||
Sbjct: 28356 gagaggaggccaagaacaag 28337
to top
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 100  ctcaagggcacggtggtgctcatgcgcaaga 130
            ||||||||||   ||||||||||||||||||
Sbjct: 2317 ctcaagggcaacctggtgctcatgcgcaaga 2347
to top
>ref|XM_416704.1| PREDICTED: Gallus gallus similar to Protein C21orf63 precursor
            (Protein PRED34) (SUE21) (UNQ2504/PRO5993) (LOC418496),
            mRNA
          Length = 1354

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 10   gagcagtgaaagcgaggag 28
            |||||||||||||||||||
Sbjct: 1123 gagcagtgaaagcgaggag 1141
to top
>gb|AY554355.1| Takifugu rubripes claudin 11b (cldn11b) gene, complete cds
          Length = 6531

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 24   aggagaggaggccaagaac 42
            |||||||||||||||||||
Sbjct: 6396 aggagaggaggccaagaac 6378
to top
>gb|AY271304.1| Haemaphysalis longicornis calreticulin mRNA, complete cds
          Length = 1489

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   gaggaggccaagaacaaga 46
            |||||||||||||||||||
Sbjct: 1134 gaggaggccaagaacaaga 1152
to top
>gb|AC122800.3| Mus musculus BAC clone RP23-451G9 from chromosome 8, complete sequence
          Length = 179384

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     caagatgctgctgggagggctaa 64
              |||||||||||||||| ||||||
Sbjct: 139572 caagatgctgctgggaaggctaa 139550
to top
>gb|AY364178.1| Hyperolius sp. FB-2003 CXCR4 gene, partial cds
          Length = 693

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 32  aggccaagaacaagatgctgctg 54
           ||||||||| |||||||||||||
Sbjct: 199 aggccaagatcaagatgctgctg 177
to top
>ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 11 (LOC479191), mRNA
          Length = 4681

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3940 caagaacaagatgatgctgggag 3918
to top
>ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 1 (LOC479191), mRNA
          Length = 4681

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3940 caagaacaagatgatgctgggag 3918
to top
>ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 10 (LOC479191), mRNA
          Length = 4663

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3922 caagaacaagatgatgctgggag 3900
to top
>ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 9 (LOC479191), mRNA
          Length = 4438

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3697 caagaacaagatgatgctgggag 3675
to top
>ref|XM_851231.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 8 (LOC479191), mRNA
          Length = 3800

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3059 caagaacaagatgatgctgggag 3037
to top
>ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 7 (LOC479191), mRNA
          Length = 4777

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 4036 caagaacaagatgatgctgggag 4014
to top
>ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 6 (LOC479191), mRNA
          Length = 4696

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3955 caagaacaagatgatgctgggag 3933
to top
>ref|XM_851109.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 5 (LOC479191), mRNA
          Length = 2684

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 1943 caagaacaagatgatgctgggag 1921
to top
>ref|XM_851062.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 4 (LOC479191), mRNA
          Length = 2248

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 1507 caagaacaagatgatgctgggag 1485
to top
>ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
            variant 3 (LOC479191), mRNA
          Length = 4681

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 36   caagaacaagatgctgctgggag 58
            ||||||||||||| |||||||||
Sbjct: 3940 caagaacaagatgatgctgggag 3918
to top
>gb|AC101709.11| Mus musculus chromosome 10, clone RP23-271A21, complete sequence
          Length = 143875

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    gaggaggccaagaacaaga 46
             |||||||||||||||||||
Sbjct: 75827 gaggaggccaagaacaaga 75809
to top
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 23      gaggagaggaggccaagaa 41
               |||||||||||||||||||
Sbjct: 1775688 gaggagaggaggccaagaa 1775706
to top
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence
          Length = 36615

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 103 aagggcacggtggtgctca 121
           |||||||||||||||||||
Sbjct: 330 aagggcacggtggtgctca 348
to top
>gb|AY395260.1| Haemaphysalis longicornis calreticulin gene, complete cds
          Length = 1336

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   gaggaggccaagaacaaga 46
            |||||||||||||||||||
Sbjct: 1193 gaggaggccaagaacaaga 1211
to top
>dbj|AK089350.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730012C10
           product:unclassifiable, full insert sequence
          Length = 1423

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 42  caagatgctgctgggagggctaa 64
           |||||||||||||||| ||||||
Sbjct: 509 caagatgctgctgggaaggctaa 487
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 26       gagaggaggccaagaacaa 44
                |||||||||||||||||||
Sbjct: 18069541 gagaggaggccaagaacaa 18069523
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 27      agaggaggccaagaacaag 45
               |||||||||||||||||||
Sbjct: 7791998 agaggaggccaagaacaag 7791980
to top
>gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromosome unknown, complete
             sequence
          Length = 240555

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    gagcagtgaaagcgaggag 28
             |||||||||||||||||||
Sbjct: 10263 gagcagtgaaagcgaggag 10245
to top
>gb|AC010731.3| Homo sapiens BAC clone RP11-363B11 from 2, complete sequence
          Length = 128817

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    ggagaggaggccaagaaca 43
             |||||||||||||||||||
Sbjct: 42364 ggagaggaggccaagaaca 42346
to top
>gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, complete sequence
          Length = 176383

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    aagcgaggagaggaggcca 37
             |||||||||||||||||||
Sbjct: 94781 aagcgaggagaggaggcca 94799
to top
>gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome unknown, complete
              sequence
          Length = 250515

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gagcagtgaaagcgaggag 28
              |||||||||||||||||||
Sbjct: 185101 gagcagtgaaagcgaggag 185083
to top
>gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154026

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    aggaggccaagaacaagat 47
             |||||||||||||||||||
Sbjct: 80254 aggaggccaagaacaagat 80236
to top
>gb|AC012305.7| Homo sapiens BAC clone RP11-84G18 from 2, complete sequence
          Length = 190385

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 23    gaggagaggaggccaagaacaag 45
             |||||||||||| ||||||||||
Sbjct: 73407 gaggagaggagggcaagaacaag 73385
to top
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1077_A12
          Length = 149089

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     agaggaggccaagaacaag 45
              |||||||||||||||||||
Sbjct: 128263 agaggaggccaagaacaag 128245
to top
>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006L10
          Length = 171115

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    agaggaggccaagaacaag 45
             |||||||||||||||||||
Sbjct: 32361 agaggaggccaagaacaag 32343
to top
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete
             sequences
          Length = 174520

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    caagaacaagatgctgctg 54
             |||||||||||||||||||
Sbjct: 57629 caagaacaagatgctgctg 57611
to top
>dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, map 22, complete
            sequences
          Length = 100580

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   caagaacaagatgctgctg 54
            |||||||||||||||||||
Sbjct: 8315 caagaacaagatgctgctg 8297
to top
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    caagaacaagatgctgctg 54
             |||||||||||||||||||
Sbjct: 28907 caagaacaagatgctgctg 28889
to top
>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 42     caagatgctgctgggagggctaa 64
              |||||||||||||||| ||||||
Sbjct: 197148 caagatgctgctgggaaggctaa 197170
to top
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1090H08
          Length = 200720

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    gagaggaggccaagaacaa 44
             |||||||||||||||||||
Sbjct: 73337 gagaggaggccaagaacaa 73319
to top
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
             region, complete sequence
          Length = 158063

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    caagaacaagatgctgctg 54
             |||||||||||||||||||
Sbjct: 28907 caagaacaagatgctgctg 28889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,134,038
Number of Sequences: 3902068
Number of extensions: 1134038
Number of successful extensions: 71608
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 70899
Number of HSP's gapped (non-prelim): 714
length of query: 132
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 111
effective length of database: 17,151,101,840
effective search space: 1903772304240
effective search space used: 1903772304240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top