Clone Name | bastl18d05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|AL139191.15| Human DNA sequence from clone RP3-465M14 on chr... | 42 | 0.23 | 2 | gb|AC005543.2|AC005543 Homo sapiens chromosome 4 clone B320D6 ma... | 42 | 0.23 | 3 | emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-1... | 38 | 3.5 |
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>emb|AL139191.15| Human DNA sequence from clone RP3-465M14 on chromosome 6q22.33-23.3 Contains the 5' end of the PREP gene for prolyl endopeptidase and a CpG island, complete sequence Length = 127973 Score = 42.1 bits (21), Expect = 0.23 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 caatcaacagcctttggttgatggcgatg 79 |||||||||||||||| ||||||| |||| Sbjct: 114759 caatcaacagcctttgattgatggtgatg 114731
>gb|AC005543.2|AC005543 Homo sapiens chromosome 4 clone B320D6 map 4q25, complete sequence Length = 79810 Score = 42.1 bits (21), Expect = 0.23 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 caatcaacagcctttggttgatggcgatg 79 |||||||||||||||| ||||||| |||| Sbjct: 53789 caatcaacagcctttgattgatggtgatg 53817
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 38.2 bits (19), Expect = 3.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tttggttgatggcgatgaa 81 ||||||||||||||||||| Sbjct: 72555 tttggttgatggcgatgaa 72537 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 782,126 Number of Sequences: 3902068 Number of extensions: 782126 Number of successful extensions: 50021 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50017 Number of HSP's gapped (non-prelim): 4 length of query: 84 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 63 effective length of database: 17,151,101,840 effective search space: 1080519415920 effective search space used: 1080519415920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)