ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 39 0.005
2UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1 38 0.007

>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +1

Query: 52  MLPRKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDE 171
           MLPRKREIVA EVE+ QKK R                GR  EIDE
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDE 45



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>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +1

Query: 52  MLPRKREIVASEVENQQKKARP-----XXXXXXXXXXGRPTEIDE 171
           MLPRKREIVA EVE+ QKK R                GR  EIDE
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDE 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,518,868
Number of Sequences: 219361
Number of extensions: 109426
Number of successful extensions: 277
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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