>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
           (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 50/73 (68%)
 Frame = +3

Query: 141 MLTATKPLVGGACXXXXXXXXXXTFVVPEARRKPGNGRRTSVSKVGXXXXXXXXXXXXXL 320
           MLTATKPLVGGAC          TFVVPEARRKPGNGRRTSVSKVG             L
Sbjct: 1   MLTATKPLVGGACAAPSSSARRRTFVVPEARRKPGNGRRTSVSKVGSTSTSTTTTTTTTL 60

Query: 321 SADSNGAAVGTVT 359
           SADSNGAAVGTVT
Sbjct: 61  SADSNGAAVGTVT 73

>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:2)
          Length = 932

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +3

Query: 141 MLTATKPLVGGACXXXXXXXXXXTFVVPEARRKPG-NGRRTSVSKVGXXXXXXXXXXXXX 317
           M TATKPLVG             +F+V EARRKP  N RRT V                 
Sbjct: 1   MQTATKPLVGARAVPLSRRA---SFLVAEARRKPSTNARRTRVG------STSTTTTTTT 51

Query: 318 LSADSNGAAVGTV 356
           +  D NG A+ TV
Sbjct: 52  ILTDVNGPALTTV 64

>SC10A_RAT (Q62968) Sodium channel protein type 10 alpha subunit (Sodium|
           channel protein type X alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.8) (Peripheral nerve
           sodium channel 3) (Sensory neuron sodium channel)
          Length = 1956

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
 Frame = +2

Query: 8   PSTTSSFPD-LPGQGC----------TV*LGRNQPRRCNLPPHRVAQ*PTP*RTHDADGD 154
           PS   SFPD +   G           ++ LGR   +   LP   + Q P P R H  +G 
Sbjct: 509 PSQDISFPDGITDDGVFHGDQESRRGSILLGRGAGQTGPLPRSPLPQSPNPGRRHGEEGQ 568

Query: 155 QAASRGRVCRAVVVGPAEDVRGAR 226
                G +      GPA D  G +
Sbjct: 569 LGVPTGELTAGAPEGPALDTTGQK 592

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa)
          Length = 1200

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 240 VSGEPRAPRTSSAGPTTTARHTRPRLAAWSPSA 142
           +S EPR PR  S+      RH RP L A  P A
Sbjct: 71  LSREPRGPRALSSFVRDARRHPRPALTASPPPA 103

>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -3

Query: 225 RAPRTSSAGPTTTARHTRPRLAAWSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*TVQP 46
           R+   S  G   + RH R R  +WS S S  R    Y  +R  GR H  G  R       
Sbjct: 378 RSSSRSRRGYYRSGRHARSRSRSWSRSRSRSR---RYSRSRSRGRRHSDGGSRDGHRYSR 434

Query: 45  CPGRSG 28
            P R G
Sbjct: 435 SPARRG 440

>MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)|
          Length = 1098

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 62   LGRNQPRRCNLPPHRVAQ*PTP*RTHDADGDQAASRGRVCRAVVVGPAEDVRGARGSPET 241
            + + +PRR +  P R A  P P R  D +G   ++RG      ++      R  RG P T
Sbjct: 930  MAKGKPRRSSQAPTRAA--PAPPRGMDRNGVPPSARGGPLPLEIMSGGGTHRPPRGPPST 987

>NIFU_AZOBR (Q43909) Nitrogen fixation protein nifU|
          Length = 310

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 216 RTSSAGPTTTARHTRPRLAAWSPSASWVR 130
           +T + GP      T P  + W+PS+ W R
Sbjct: 191 KTGAVGPAQAPSPTPPARSGWTPSSRWPR 219

>TBX21_MOUSE (Q9JKD8) T-box transcription factor TBX21 (T-box protein 21)|
           (Transcription factor TBLYM) (T-cell-specific T-box
           transcription factor T-bet)
          Length = 530

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = -3

Query: 210 SSAGPTTTARHTRPRLAAWSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*TVQPCPGRS 31
           S+ GPT      +  LA   P A W        A ++  ++   GWFRP  T+   PG  
Sbjct: 410 SAPGPTVPYYRGQDVLA---PGAGWP------VAPQYPPKMSPAGWFRPMRTLPMDPGLG 460

Query: 30  GKEE 19
             EE
Sbjct: 461 SSEE 464

>ACSA2_PSEPK (Q88DW6) Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA|
           ligase 2) (Acyl-activating enzyme 2)
          Length = 644

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 108 TRWGGRLHRLGWFRPS*TVQPCPGRSGKEEVVEGS 4
           T W  +  RL W +P  +VQ C   +GK    +G+
Sbjct: 37  TFWAEQAKRLDWIKPWSSVQQCDLHTGKARWFDGA 71

>YQBO_BACSU (P45931) Hypothetical protein yqbO|
          Length = 1585

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 241  GFRRASGTTNVLRRADDDGAAHAPPTSGLVAVSIVGTLRCWLLRYAMGRKVAPSWL 74
            G  +   + +V + A+    + A   SG+ AVS  G ++ WL+   M  K   SWL
Sbjct: 1311 GIVKGLDSVDVKKFAEKQAGSLAAAYSGMGAVS--GNVKQWLMAAIMATKTPMSWL 1364

>CHB4_ANTPO (P02847) Chorion class B protein PC401 precursor (Fragment)|
          Length = 171

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 150 PSASWVRYGVGYCATRWGGRLHRLG 76
           PSA  ++  VG C  RWG  L R G
Sbjct: 8   PSALMIQSAVGQCLGRWGPGLGRCG 32

>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent|
           helicase RAD16)
          Length = 790

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -3

Query: 156 WSPSASWVRYGVGYCATRWGGRLHRLGWFRPS*TVQPCPGRSGKEEVVE 10
           W+PS  W          + G R+HR+G +RP    + C   S +  ++E
Sbjct: 718 WNPSVEW----------QSGDRVHRIGQYRPVKITRFCIEDSIEARIIE 756

>SUBT_BACLI (P00780) Subtilisin Carlsberg precursor (EC 3.4.21.62)|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = -2

Query: 355 TVPTAAPLESADKXXXXXXXXXXXXLPTLETLVRRPLPGFRRASGTTNVLRRA-DDDGAA 179
           TVP   PL  ADK            +  L+T ++   P      G + V   A + DG  
Sbjct: 108 TVPYGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVGGASFVAGEAYNTDGNG 167

Query: 178 HAPPTSGLVA 149
           H    +G VA
Sbjct: 168 HGTHVAGTVA 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,812,245
Number of Sequences: 219361
Number of extensions: 853463
Number of successful extensions: 2375
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)