ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CN155_HUMAN (Q5H9T9) Protein C14orf155 29 4.1
2BMP4_DAMDA (Q29607) Bone morphogenetic protein 4 precursor (BMP-4) 28 5.4
3BMP4_RABIT (O46576) Bone morphogenetic protein 4 precursor (BMP-4) 28 5.4
4VL1_BPV1 (P03103) Major capsid protein L1 28 7.0
5BMP4_HUMAN (P12644) Bone morphogenetic protein 4 precursor (BMP-... 28 7.0
6VL1_BPV2 (P06458) Major capsid protein L1 28 9.2
7BMP4_RAT (Q06826) Bone morphogenetic protein 4 precursor (BMP-4)... 28 9.2
8BMP4_MOUSE (P21275) Bone morphogenetic protein 4 precursor (BMP-... 28 9.2
9OMP32_COMAC (P24305) Outer membrane porin protein 32 precursor (... 28 9.2
10HEM2_BRAJA (P45622) Delta-aminolevulinic acid dehydratase (EC 4.... 28 9.2

>CN155_HUMAN (Q5H9T9) Protein C14orf155|
          Length = 837

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKE 20
           E+QPPPA++ P    P P +E
Sbjct: 669 EVQPPPAEEAPSEVQPPPAEE 689



 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKEKRS 11
           E+QPPPA++ P    P P +E  S
Sbjct: 657 EVQPPPAEEAPAEVQPPPAEEAPS 680



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKE 20
           E+QPPPA++ P    P P +E
Sbjct: 645 EVQPPPAEEAPAEVQPPPAEE 665



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKE 20
           E+QPPPA++ P    P P +E
Sbjct: 633 EVQPPPAEEAPAEVQPPPAEE 653



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKE 20
           E+QPPPA++ P    P P +E
Sbjct: 621 EVQPPPAEEAPAEVQPPPAEE 641



 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 82  EIQPPPAQDFPDRTGPNPGKE 20
           E+QPPPA++ P    P P +E
Sbjct: 609 EVQPPPAEEAPAEVQPPPAEE 629



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>BMP4_DAMDA (Q29607) Bone morphogenetic protein 4 precursor (BMP-4)|
          Length = 408

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 136 QDDSGSKWSKNQHQILLPEIQPPPAQDFP 50
           Q D G  W +  H+I + E+  PPA+  P
Sbjct: 164 QVDQGPDWERGFHRINIYEVMKPPAEAVP 192



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>BMP4_RABIT (O46576) Bone morphogenetic protein 4 precursor (BMP-4)|
          Length = 409

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 136 QDDSGSKWSKNQHQILLPEIQPPPAQDFP 50
           Q D G  W +  H+I + E+  PPA+  P
Sbjct: 165 QVDQGPDWERGFHRINIYEVMKPPAEAVP 193



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>VL1_BPV1 (P03103) Major capsid protein L1|
          Length = 495

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 118 KWSKNQHQILLPEIQPPPAQDFPDRTGPNPGKEK 17
           K S NQ+++   ++  P     PDRT  NP KE+
Sbjct: 60  KVSANQYRVFKIQLPDPNQFALPDRTVHNPSKER 93



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>BMP4_HUMAN (P12644) Bone morphogenetic protein 4 precursor (BMP-4) (BMP-2B)|
          Length = 408

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 136 QDDSGSKWSKNQHQILLPEIQPPPAQDFP 50
           Q D G  W +  H+I + E+  PPA+  P
Sbjct: 164 QVDQGPDWERGFHRINIYEVMKPPAEVVP 192



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>VL1_BPV2 (P06458) Major capsid protein L1|
          Length = 497

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 133 DDSGSKWSKNQHQILLPEIQPPPAQDFPDRTGPNPGKEK 17
           D +  K S NQ ++   ++  P     PDRT  NP KE+
Sbjct: 55  DKTVPKVSANQFRVFKIQLPDPNQFALPDRTVHNPSKER 93



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>BMP4_RAT (Q06826) Bone morphogenetic protein 4 precursor (BMP-4) (BMP-2B)|
          Length = 408

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 136 QDDSGSKWSKNQHQILLPEIQPPPAQDFP 50
           Q D G  W +  H+I + E+  PPA+  P
Sbjct: 165 QVDQGPDWEQGFHRINIYEVMKPPAEMVP 193



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>BMP4_MOUSE (P21275) Bone morphogenetic protein 4 precursor (BMP-4) (BMP-2B)|
          Length = 408

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 136 QDDSGSKWSKNQHQILLPEIQPPPAQDFP 50
           Q D G  W +  H+I + E+  PPA+  P
Sbjct: 165 QVDQGPDWEQGFHRINIYEVMKPPAEMVP 193



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>OMP32_COMAC (P24305) Outer membrane porin protein 32 precursor (OMP32)|
          Length = 351

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 6   SKDLFSFPGFGPVLSGKSWAGG 71
           S DLFS  G GP +  ++WA G
Sbjct: 122 SYDLFSATGIGPFMGFRNWAAG 143



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>HEM2_BRAJA (P45622) Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)|
           (Porphobilinogen synthase) (ALAD) (ALADH)
          Length = 353

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = +3

Query: 9   KDLFSFPGFGPVLSGK-----SWAGGGWISGRRIWCWFLLHFE 122
           KD F+ P F   +SG+     + AG GW+ G R     LL F+
Sbjct: 288 KDTFAMPTFAYQVSGEYAMIAAAAGNGWLDGDRAMMESLLAFK 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,273,760
Number of Sequences: 219361
Number of extensions: 358420
Number of successful extensions: 1445
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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