ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl18b03 |
|---|---|
| Clone Library Name | barley_pub |
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 79.0 bits (193), Expect = 4e-15 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = +1 Query: 172 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMS 351 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + ++ RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMD 62 Query: 352 RKLRFFKEQMSKAGIQV 402 RKLRF ++++ KA I + Sbjct: 63 RKLRFVEKEIRKANIPI 79
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 79.0 bits (193), Expect = 4e-15 Identities = 33/78 (42%), Positives = 54/78 (69%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 + RSE + L+Q+ +PT +A+ VS LG+LGL++F+DLNA S FQR + + RC E+ + Sbjct: 4 MFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRFVVDVWRCEELEK 63 Query: 355 KLRFFKEQMSKAGIQVPP 408 F +E++ +AG+ +PP Sbjct: 64 TFTFLQEEVRRAGLVLPP 81
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 79.0 bits (193), Expect = 4e-15 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = +1 Query: 172 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMS 351 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + ++ RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMD 62 Query: 352 RKLRFFKEQMSKAGIQV 402 RKLRF ++++ KA I + Sbjct: 63 RKLRFVEKEIRKANIPI 79
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 79.0 bits (193), Expect = 4e-15 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = +1 Query: 172 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMS 351 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + ++ RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMD 62 Query: 352 RKLRFFKEQMSKAGIQV 402 RKLRF ++++ KA I + Sbjct: 63 RKLRFVEKEIRKANIPI 79
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 79.0 bits (193), Expect = 4e-15 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = +1 Query: 172 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMS 351 +L RSE M L Q+ + +E+A+ VS LG+LG +QF+DLN D + FQR + ++ RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMD 62 Query: 352 RKLRFFKEQMSKAGIQV 402 RKLRF ++++ KA I + Sbjct: 63 RKLRFVEKEIRKANIPI 79
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 75.9 bits (185), Expect = 4e-14 Identities = 35/77 (45%), Positives = 53/77 (68%) Frame = +1 Query: 172 DLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMS 351 +L RSE M L Q+ + +E+A+ VS L +LG +QF+DLN D + FQR + ++ RC EM Sbjct: 3 ELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMD 62 Query: 352 RKLRFFKEQMSKAGIQV 402 RKLRF ++++ KA I + Sbjct: 63 RKLRFVEKEIRKANIPI 79
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 73.9 bits (180), Expect = 1e-13 Identities = 33/75 (44%), Positives = 51/75 (68%) Frame = +1 Query: 163 PSMDLMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCA 342 P + RSE M L Q+ + +++++ V+ LG+LGL+QF+DLN D S FQR Y ++ RC Sbjct: 12 PQPGIYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCD 71 Query: 343 EMSRKLRFFKEQMSK 387 EM RKLR+ + ++ K Sbjct: 72 EMERKLRYLEREIKK 86
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 72.0 bits (175), Expect = 5e-13 Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 + RSE M L QV + E+A+ V+ LG+LGL+QFKDLNA+ + FQR + ++ RC + R Sbjct: 4 VFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCESLER 63 Query: 355 KLRFFKEQM-SKAGIQVP 405 LRF +++M ++ IQVP Sbjct: 64 ILRFLEDEMQNEILIQVP 81
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 67.0 bits (162), Expect = 2e-11 Identities = 30/69 (43%), Positives = 47/69 (68%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 + RSE M L Q+ + E+A+ V+ LG+LGL+QFKDLN + + FQR + ++ RC + R Sbjct: 4 VFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCESLER 63 Query: 355 KLRFFKEQM 381 LRF +++M Sbjct: 64 ILRFLEDEM 72
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 65.5 bits (158), Expect = 5e-11 Identities = 30/77 (38%), Positives = 52/77 (67%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 L RSE+M L Q+ + + +A+ +S LG+ GL+QF+DLN + S FQR + ++ RC E+ R Sbjct: 4 LFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELER 63 Query: 355 KLRFFKEQMSKAGIQVP 405 L + +++++A I +P Sbjct: 64 ILVYLVQEITRADIPLP 80
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 65.1 bits (157), Expect = 6e-11 Identities = 30/77 (38%), Positives = 51/77 (66%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 L RSE M L Q+ + + +A+ +S LG+ GL+QF+DLN + S FQR + ++ RC E+ R Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELER 63 Query: 355 KLRFFKEQMSKAGIQVP 405 L + +++++A I +P Sbjct: 64 ILVYLVQEINRADIPLP 80
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 64.3 bits (155), Expect = 1e-10 Identities = 29/77 (37%), Positives = 51/77 (66%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 L RSE M L Q+ + + +A+ +S LG+ GL++F+DLN + S FQR + ++ RC E+ R Sbjct: 4 LFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRDLNQNVSSFQRKFVGEVKRCEELER 63 Query: 355 KLRFFKEQMSKAGIQVP 405 L + +++++A I +P Sbjct: 64 ILAYLVQEINRADIPLP 80
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 63.5 bits (153), Expect = 2e-10 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +1 Query: 181 RSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSRKL 360 RS M ++Q+ I E + LG+LGL+ F+DLN++ S FQR + I R + R+L Sbjct: 10 RSADMSMVQLYISNEIGREVCNALGELGLVHFRDLNSELSAFQRAFTQDIRRLDNVERQL 69 Query: 361 RFFKEQMSKAGI 396 R+F QM KAGI Sbjct: 70 RYFHSQMEKAGI 81
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/76 (38%), Positives = 44/76 (57%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 + RS M L+Q IP E + + LG LGL+QF+DLN+ FQRT+ +I R + R Sbjct: 7 IFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVER 66 Query: 355 KLRFFKEQMSKAGIQV 402 + R+F + K I++ Sbjct: 67 QYRYFYSLLKKHDIKL 82
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = +1 Query: 241 VSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSRKLRFFKEQMSKAGIQVP 405 +S LG+L I FKDLN D FQR++ +I R + R LR+ ++ GI VP Sbjct: 1 MSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTERLLRYLHSEIDLNGIHVP 55
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC| 3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 43.1 bits (100), Expect = 3e-04 Identities = 24/71 (33%), Positives = 34/71 (47%) Frame = +1 Query: 175 LMRSEAMQLLQVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSR 354 + RS M +Q+ IP E LG + + DLN D + FQR Y Q+ R E+ R Sbjct: 7 IFRSADMTYVQLYIPLEVIREVTFLLGKMSVFMVMDLNKDLTAFQRGYVNQLRRFDEVER 66 Query: 355 KLRFFKEQMSK 387 + F E + K Sbjct: 67 MVGFLNEVVEK 77
>FLCN_BOVIN (Q3B7L5) Folliculin| Length = 579 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -3 Query: 303 RAFVCVEVFELDEAQIAEVGDGEVRGLGGDND---LQELHRLRPHQIHRGAAAPSAA 142 R C EV Q A GDG RG D + +Q R+R H GA+A S++ Sbjct: 17 RTLFCTEVLHAPLPQGAGSGDGAGRGEPADEEEGGIQMSSRIRAHSPAEGASAESSS 73
>ARHG2_MOUSE (Q60875) Rho/Rac guanine nucleotide exchange factor 2 (Lymphoid| blast crisis-like 1) (LBC'S first cousin) (Oncogene LFC) (RHOBIN) Length = 596 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +1 Query: 205 QVIIPTESAHLAVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXRCAEMSRKLRFFKE 375 Q + P + + + LGDL + QF NA++ ++TY+ C+ ++ L+ +KE Sbjct: 304 QALCPGSTRNFVIHRLGDLLISQFSGSNAEQ--MRKTYS---EFCSRHTKALKLYKE 355
>GIDA_XANOR (Q5H6D9) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 634 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 238 AVSHLGDLGLIQFKDLNADKSPFQRTYAAQIXR 336 A++H DL IQ++ LNA K P R Q R Sbjct: 70 AMAHAADLAGIQWRTLNASKGPAVRATRCQADR 102
>PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 262 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -3 Query: 330 DLCSVGALKRAFVCVEVFELDEAQIAEVGDGEVRGLGGD-NDLQELHRL 187 +L S G+L R + D ++ +VGD + G GGD +D Q++ RL Sbjct: 61 NLASYGSLARFY--------DVERLTKVGDNTIVGAGGDISDYQQIQRL 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,498,914 Number of Sequences: 219361 Number of extensions: 699224 Number of successful extensions: 2078 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2052 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2077 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
