ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl18b02 |
|---|---|
| Clone Library Name | barley_pub |
>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3| Length = 847 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = +2 Query: 209 LVSAATGALKPVLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQ 388 +V A TG VL K+G +E GV+ D+ L ELT + +L + E D Sbjct: 1 MVDAVTGF---VLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEV 57 Query: 389 DKVWMNEVRELSYDMEDSIDDF 454 K W V +++YD+ED +D + Sbjct: 58 SKEWTKLVLDIAYDIEDVLDTY 79
>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780| Length = 906 Score = 45.8 bits (107), Expect = 6e-05 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +2 Query: 245 LEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELS 424 +EKL L EY+RF+GV I L +L + AFL + + + E++E++ Sbjct: 15 VEKLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADAKKQTRALARNCLEEIKEIT 74 Query: 425 YDMEDSIDDFM 457 YD ED I+ F+ Sbjct: 75 YDAEDIIEIFL 85
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = +2 Query: 242 VLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVREL 421 V+ K+G +E F V+ D+ L ELT + +L + E D K W V + Sbjct: 9 VVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVSKEWSKLVLDF 68 Query: 422 SYDMEDSIDDF 454 +YD+ED +D + Sbjct: 69 AYDVEDVLDTY 79
>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180| Length = 839 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +2 Query: 221 ATGALKPVLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVW 400 A + ++KLG L +E G+ ++ L EL + FL E + + + W Sbjct: 2 AEAIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESERVRNW 61 Query: 401 MNEVRELSYDMEDSIDDF 454 + +RE SYD ED ++ F Sbjct: 62 VAGIREASYDAEDILEAF 79
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = +2 Query: 242 VLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVREL 421 V+ K+ +E GV+ D+ L ELT ++ +L + + D K W V ++ Sbjct: 9 VVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVSKEWTKLVLDI 68 Query: 422 SYDMEDSIDDF 454 +YD+ED +D + Sbjct: 69 AYDVEDVLDTY 79
>DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602| Length = 1138 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/72 (26%), Positives = 36/72 (50%) Frame = +2 Query: 245 LEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELS 424 + KL L EY F+GV + L +L +++FL + + + E++++ Sbjct: 10 VNKLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLKDADAKKHTSALVRYCVEEIKDIV 69 Query: 425 YDMEDSIDDFMQ 460 YD ED ++ F+Q Sbjct: 70 YDAEDVLETFVQ 81
>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L| Length = 899 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +2 Query: 245 LEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELS 424 +EKL EY +FKGV + L L +++FL + + + E++++ Sbjct: 8 VEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIV 67 Query: 425 YDMEDSIDDFM 457 YD ED I+ F+ Sbjct: 68 YDTEDIIETFI 78
>DRL12_ARATH (Q9LQ54) Probable disease resistance protein At1g59620 (CW9)| Length = 695 Score = 38.5 bits (88), Expect = 0.009 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = +2 Query: 245 LEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELS 424 +EKL L E RF+GV+ L +L + FL + + EV+E+ Sbjct: 10 VEKLWDLLVRESDRFQGVKKQFNELRSDLNKLRCFLEDADAKKHQSAMVSNTVKEVKEIV 69 Query: 425 YDMEDSIDDFMQ 460 YD ED I+ F++ Sbjct: 70 YDTEDIIETFLR 81
>DRL8_ARATH (Q8W3K3) Putative disease resistance protein At1g58400| Length = 910 Score = 38.5 bits (88), Expect = 0.009 Identities = 20/71 (28%), Positives = 37/71 (52%) Frame = +2 Query: 245 LEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELS 424 +EKL EY++F+GV I L L +++FL ++ + + E++E+ Sbjct: 10 VEKLWDRLTQEYEQFQGVEDRIAELKSNLNLLKSFLKDAEAKKNTSQMVRHCVEEIKEIV 69 Query: 425 YDMEDSIDDFM 457 YD E+ I+ F+ Sbjct: 70 YDTENMIETFI 80
>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B| subunit (Voltage-gated calcium channel alpha subunit Cav2.2) (DOE-4) Length = 2326 Score = 35.4 bits (80), Expect = 0.078 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Frame = +1 Query: 37 KSSKEEADDVELTRRPEPTLSESFPLLEL------EGPRPTTFTNHKAASPSPGSTTRNH 198 +SSKE RRP P+ +E E P+P + + ++ASPS G+ H Sbjct: 2081 QSSKERERGRSQERRP-PSSAEKQRYYSCDRYGSREPPQPRSTDHSRSASPSTGTEQGFH 2139 Query: 199 GGGSGECSDRSLETSPGEARRS-GRR 273 GSG +D L+++ G + S GRR Sbjct: 2140 RQGSGSVNDSPLQSASGSSTPSRGRR 2165
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 32.0 bits (71), Expect = 0.87 Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 19/109 (17%) Frame = +1 Query: 31 SLKSSKEEADDVELTRRPEPTLSESFP-LLELEGPRPTTFTNHKAAS--------PSPGS 183 +L S +E+ D RRPE S L G R + HKAAS PSPG+ Sbjct: 1996 ALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAASVELPQRRSPSPGA 2055 Query: 184 TTRNHGG-GSGECS-------DRSLETSPGEARRSGRR--*VQAVQGRA 300 T GG G GE + R L P + + SG R ++++ GRA Sbjct: 2056 TRLTRGGLGEGEYAQRLQALRQRLLRGGPEDGKVSGLRGPLLESLGGRA 2104
>NFIX_CHICK (Q90932) Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X)| (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 431 Score = 32.0 bits (71), Expect = 0.87 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Frame = +1 Query: 64 VELTRRP--EPTLS-----ESFPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGSGECS 222 V L RRP PT S ++ +LEGP F + SP+PGS+ GG Sbjct: 260 VTLGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYSGPGRSPAPGSSQGPWGG------ 313 Query: 223 DRSLETSPGEARRSGR 270 ++TSP ++SG+ Sbjct: 314 --DVDTSPATLKKSGK 327
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 32.0 bits (71), Expect = 0.87 Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 19/109 (17%) Frame = +1 Query: 31 SLKSSKEEADDVELTRRPEPTLSESFP-LLELEGPRPTTFTNHKAAS--------PSPGS 183 +L S +E+ D RRPE S L G R + HKAAS PSPG+ Sbjct: 1996 ALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAASVELPQRRSPSPGA 2055 Query: 184 TTRNHGG-GSGECS-------DRSLETSPGEARRSGRR--*VQAVQGRA 300 T GG G GE + R L P + + SG R ++++ GRA Sbjct: 2056 TRLTRGGLGEGEYAQRLQALRQRLLRGGPEDGKVSGLRGPLLESLGGRA 2104
>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1| Length = 1054 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = +2 Query: 308 IRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELSYDMEDSIDD 451 + L+ L + A L+ E + + + W+NE+R++ Y ED++DD Sbjct: 39 LERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDD 86
>VGLB_HSVA1 (Q04463) Glycoprotein B precursor| Length = 933 Score = 31.2 bits (69), Expect = 1.5 Identities = 21/63 (33%), Positives = 23/63 (36%) Frame = +1 Query: 85 EPTLSESFPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGSGECSDRSLETSPGEARRS 264 EP + + EG PT SP P R GGGSG SPG RS Sbjct: 57 EPVEDGDYDEYDDEGHTPTDVPGSGPESPGPDRPPRGPGGGSGR-----RRGSPGNGTRS 111 Query: 265 GRR 273 R Sbjct: 112 AAR 114
>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas| syringae protein 3) Length = 926 Score = 31.2 bits (69), Expect = 1.5 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Frame = +2 Query: 197 MEAALVSAATGALKPVLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLL---KMSE 367 M +A V G + VLE +E GV G+I + +EL M++FL K Sbjct: 1 MASATVDFGIGRILSVLE-------NETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGG 53 Query: 368 DEDPDVQDKVWMNEV---RELSYDMEDSIDDF 454 + +++ V R+L+Y +ED +D+F Sbjct: 54 NGSTTTTTQLFQTFVANTRDLAYQIEDILDEF 85
>UBP1_SCHPO (Q9USM5) Probable ubiquitin carboxyl-terminal hydrolase 1 (EC| 3.1.2.15) (Ubiquitin thioesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) Length = 849 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 284 RFKGVRGDIRSLT--RELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELSYDM 433 RF G GD+R R+L F L + + P ++D W++ + + YD+ Sbjct: 741 RFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDL 792
>SSH1_HUMAN (Q8WYL5) Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-1L) (hSSH-1L) Length = 1049 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 4 LAQDTQLAFSLKSSKEEADDVELTRRPEPTLSESFPLLELEG-PRPTTFTNHKAASPSP 177 LA+ L FS + EAD + + TLSES L E +G PR T+ + P+P Sbjct: 979 LAKLGSLTFSTEDLSSEADPSTVADSQDTTLSESSFLHEPQGTPRDPAATSKPSGKPAP 1037
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 64 VELTRRPEPTLSESFPLLELEGPRPTTFTNHKAASPSPGSTT 189 + T P PT + S P+ P PTT + +PSP +TT Sbjct: 1442 ITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTT 1483
>YOY8_CAEEL (P34665) Hypothetical protein ZK652.8| Length = 171 Score = 30.0 bits (66), Expect = 3.3 Identities = 24/92 (26%), Positives = 46/92 (50%) Frame = +2 Query: 200 EAALVSAATGALKPVLEKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDP 379 + +++A G LK +K+ L DE K G + ++ L++E+ E+ Sbjct: 60 QMTILTATGGELKEKHKKIRGLL-DEAKA-NGQQKELEELSKEI-------------ENV 104 Query: 380 DVQDKVWMNEVRELSYDMEDSIDDFMQSVGSE 475 + Q ++W+NE+ ++ +D ID M +GSE Sbjct: 105 ETQTRIWLNELHDV-HDKRVDIDCQMIRLGSE 135
>LIPA_PSEFL (P26504) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 449 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -2 Query: 326 HG*AT*CRHARP*TACTHRLP--ERRASPGLVSRLLSLHSPEPPPWLRVVLP 177 HG CRH A HRLP + A PG+++R + PPW R P Sbjct: 43 HGLGLGCRHTGRGVARQHRLPGSDPPAFPGILTR-------KRPPWTRCTQP 87
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 29.6 bits (65), Expect = 4.3 Identities = 23/71 (32%), Positives = 26/71 (36%) Frame = +1 Query: 37 KSSKEEADDVELTRRPEPTLSESFPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGSGE 216 K S + A VE P P S + P + SPG T RN GG E Sbjct: 579 KPSPQPATWVEGASSPRPPSSGAGP-------------GSRRKPASPGRTLRNGRGGEAE 625 Query: 217 CSDRSLETSPG 249 D SL PG Sbjct: 626 PLDLSLRAGPG 636
>DOK3_MOUSE (Q9QZK7) Docking protein 3 (Downstream of tyrosine kinase 3)| (P62(dok)-like protein) (DOK-L) Length = 444 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -2 Query: 272 RLPERRASPGL-VSRLLSLHSPEPPPWLRVVLPG 174 RLPE SP + R LSL S EPP LR V PG Sbjct: 257 RLPELAMSPPCPLPRALSLPSLEPPGELREVAPG 290
>TOB2_HUMAN (Q14106) Tob2 protein (Transducer of erbB-2 2)| Length = 344 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +1 Query: 55 ADDVELTRRPEPTLSES-FPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGS 210 + D L+ P P+ +S P +P TFT A+ GST GGG+ Sbjct: 145 SQDSSLSNSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFGSTKMKKGGGA 197
>FLIG_BORBU (P52610) Flagellar motor switch protein fliG| Length = 344 Score = 29.6 bits (65), Expect = 4.3 Identities = 12/50 (24%), Positives = 28/50 (56%) Frame = +2 Query: 248 EKLGALAGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKV 397 +KL +L+ ++Y GV + + E F+++ E+EDP++ +++ Sbjct: 191 KKLASLSSEDYTSAGGVDNVVEIINMADRKTEKFIIESLEEEDPELAEEI 240
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 5.6 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Frame = +1 Query: 40 SSKEEADDVELTRRPEPTLSESFPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGS-GE 216 SS++E + +P P ++ P P+P K SP PG+ GGS G Sbjct: 134 SSQQEPPAAKPESKPTPKPGQNVPKPHAPAPKPKPGAPSK--SPKPGARPGPRPGGSAGL 191 Query: 217 CSDRSLETSPGEARRSG 267 S PG RR+G Sbjct: 192 PSAARPGPRPGAGRRTG 208
>CPKA_PYRAB (Q9UWF8) Carbamate kinase (EC 2.7.2.2) (Carbamate kinase-like| carbamoylphosphate synthetase) Length = 314 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +2 Query: 122 WKVLVPPPSQITRRHLHLQVAPLATMEAALVSAATGALKPVLEKLGALAGDEYKRFKGVR 301 W+ +VP P +RH+ + + +V A+ G PV+E+ G + G E K + Sbjct: 161 WRRVVPSPDP--KRHVEAETIKKLVEDGVIVIASGGGGVPVIEEDGEIKGVEAVIDKDLA 218 Query: 302 GD 307 G+ Sbjct: 219 GE 220
>SC5A2_MOUSE (Q923I7) Sodium/glucose cotransporter 2 (Na(+)/glucose| cotransporter 2) (Low affinity sodium-glucose cotransporter) Length = 670 Score = 29.3 bits (64), Expect = 5.6 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 9/67 (13%) Frame = +1 Query: 19 QLAFSLKSSKEEADDVELTRRPEPTLSESFPLLELEGPRPTTFTN---------HKAASP 171 +L FSL+ SKEE +D++ ELEGP P N + SP Sbjct: 556 RLVFSLRHSKEEREDLDAD--------------ELEGPAPAPVQNGGQECAMEMEEVQSP 601 Query: 172 SPGSTTR 192 +PG R Sbjct: 602 APGLLRR 608
>K1683_HUMAN (Q9H0B3) Protein KIAA1683| Length = 1180 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -1 Query: 333 VSSRVSDLMSPRTPLNRLYSSPARAPSFSRTGFKAPVAALTRAA 202 VS+R + +P TPL+R Y PS ++T + PV A T A Sbjct: 284 VSARTNKARAPETPLSRRYDQAVTRPSRAQT--QGPVKAETPKA 325
>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) Length = 418 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 82 PEPTLSESFPLLELEGPRPTTFTNHKAASPS--PGSTTRNHGGGSGECSDRSLETSPG 249 P P SE+FP L EG + + K P+ P + + G G+ D L++S G Sbjct: 223 PPPHFSETFPSLPAEG-KVYSSDEEKLEPPAGDPAGSEQEEEGSGGDSEDSFLDSSAG 279
>TOB2_MOUSE (Q9JM55) Tob2 protein (Transducer of erbB-2 2)| Length = 345 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +1 Query: 55 ADDVELTRRPEPTLSES-FPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGS 210 + D L+ P P+ +S P +P TFT A+ GST GGG+ Sbjct: 145 SQDSSLSSSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFGSTKMKKGGGA 197
>DLDH_BUCAP (Q8K9T7) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of| pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) Length = 476 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 1 KLAQDTQLAFSLKSSKEEADDVELTRRPEPTLSESFPL 114 +L + LA + S +A+D+ LT P PTLSES L Sbjct: 421 ELISEIGLAIEMGS---DAEDISLTIHPHPTLSESISL 455
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +1 Query: 127 GPRPTTFTNHKAASPSPGSTTRNHGGGSGECSDRSLETSPG 249 GPRP ++ PSPGS R GGG+G +PG Sbjct: 267 GPRPQAPGGNR---PSPGSMPRPQGGGAGPRPGGGPRPNPG 304
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +1 Query: 124 EGPRPTTFTNHKAASPSPGSTTRNHGGGSGECSDRSLETSPGEARRSGRR 273 E PRP + + P PG R GG + + G +RR G R Sbjct: 819 EAPRPAEKRSRRPRGPGPGPGRRGGGGPAPGAPAAPAAAARGPSRRPGAR 868
>VE2_COPV (Q89420) Regulatory protein E2| Length = 385 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = +1 Query: 133 RPTTFTNHKAASPSPGSTTRNHGGGSGECSDRSLETSPGEARRSGRR 273 +PTT AA S + GSG C SL G +RR GRR Sbjct: 190 QPTTIPTTSAAGTSGPELPGHSASGSGAC---SLTPRKGPSRRPGRR 233
>SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein| B) (S-layer protein 1) Length = 1664 Score = 28.9 bits (63), Expect = 7.3 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +1 Query: 43 SKEEADDVELTRRPEPTLS-ESFPLLELEGPRPTTF-TNHKAASPSPGSTTRNHGGGSGE 216 S E E T EPT S E P E P PTT T + +P+ GS GG G Sbjct: 1349 SDEPTPSDEPTPSDEPTPSDEPTPSETPEEPTPTTTPTPTPSTTPTSGSGGSGGSGGGGG 1408 Query: 217 CSDRSLETSP 246 ++ TSP Sbjct: 1409 GGGGTVPTSP 1418
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 4/74 (5%) Frame = -2 Query: 407 HSSTPYPEHQDPHPLTS*EETLPWQ*VHG*AT*CRHARP*TACTHRLPERRASPGLVSRL 228 H S PYP + PHP PW+ A A RLPE + PG Sbjct: 1275 HDSNPYPRREHPHPTAR-----PWR-----------ADDILASPPRLPEPQPYPGAPHHS 1318 Query: 227 LSLH----SPEPPP 198 +H P PP Sbjct: 1319 SYVHLRPARPTSPP 1332
>RLF_HUMAN (Q13129) Zinc finger protein Rlf (Rearranged L-myc fusion gene| protein) (Zn-15-related protein) Length = 1914 Score = 28.5 bits (62), Expect = 9.6 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -3 Query: 238 FQGSCRCTHQSRLHGCEWCYLEMEMPPCDL 149 ++G+ +C H S+ E C + PPC + Sbjct: 1668 YRGTLKCNHSSKTTSLEQCNIVQPPPPCKI 1697
>TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box protein 2)| Length = 702 Score = 28.5 bits (62), Expect = 9.6 Identities = 26/83 (31%), Positives = 31/83 (37%) Frame = +1 Query: 49 EEADDVELTRRPEPTLSESFPLLELEGPRPTTFTNHKAASPSPGSTTRNHGGGSGECSDR 228 EE L R P P + L E E R + SP G GG G R Sbjct: 359 EERAGAPLGRSPAPDSASPTRLTEPERAR-------ERRSPERGKEPAE-SGGDGPFGLR 410 Query: 229 SLETSPGEARRSGRR*VQAVQGR 297 SLE EARR +A +G+ Sbjct: 411 SLEKERAEARRKDEGRKEAAEGK 433
>SC5A2_RAT (P53792) Sodium/glucose cotransporter 2 (Na(+)/glucose| cotransporter 2) (Low affinity sodium-glucose cotransporter) Length = 670 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Frame = +1 Query: 19 QLAFSLKSSKEEADDVELTRRPEPTLSESFPLLELEGPRPTTFTN---------HKAASP 171 +L FSL+ SKEE +D++ ELEGP P N + SP Sbjct: 556 RLVFSLRHSKEEREDLDAE--------------ELEGPAPPPVQNGCQECAMGIEEVQSP 601 Query: 172 SPG 180 +PG Sbjct: 602 APG 604
>IFA4_CAEEL (P90900) Intermediate filament protein ifa-4 (Intermediate filament| protein A4) (IF-A4) (Cel IF A4) Length = 575 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/71 (26%), Positives = 29/71 (40%) Frame = +2 Query: 266 AGDEYKRFKGVRGDIRSLTRELTAMEAFLLKMSEDEDPDVQDKVWMNEVRELSYDMEDSI 445 A +E KR + GD+R +L L K ED L+Y ME+ + Sbjct: 324 AREEVKRLRTTLGDMRGKMADLEGRNLLLEKQIED----------------LNYQMEEDM 367 Query: 446 DDFMQSVGSED 478 + QS+ +D Sbjct: 368 RSYEQSLNDKD 378
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -2 Query: 287 TACTHRLPERRASPGLVSRLLSLHSPEP-PPWLRVVLPGDGDAAL--*FVKVVGRGP 126 T C+H LP PG + L P+P PPW V G + + ++ G+GP Sbjct: 591 TCCSHSLPPMPLGPG-----MDLLGPDPSPPWSTQVCQGPHSSEMPPAGLRATGQGP 642 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,483,474 Number of Sequences: 219361 Number of extensions: 1700974 Number of successful extensions: 6854 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 6276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6831 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
