ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
4ref|XM_482051.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
5ref|XM_480601.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
6ref|XM_480600.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
8dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
9dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
11ref|XM_482045.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.027
12dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
13ref|XM_482041.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
14emb|AL807833.5| Mouse DNA sequence from clone RP23-371E13 on chr... 44 0.42
15gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, com... 42 1.6
16ref|XM_482374.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
17ref|XM_482373.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
18emb|BX883049.1| Rattus norvegicus chromosome 20, major histocomp... 42 1.6
19dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AK071467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
22ref|XM_479701.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
23gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, co... 40 6.5
24gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete... 40 6.5
25gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence 40 6.5
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
27gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosom... 40 6.5
28ref|XM_783308.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
29gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.5
30gb|AY113487.1| Drosophila melanogaster RE46170 full insert cDNA 40 6.5
31ref|NM_137598.2| Drosophila melanogaster Odorant-binding protein... 40 6.5
32gb|AY071723.1| Drosophila melanogaster RH38644 full length cDNA 40 6.5
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
35emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 40 6.5
36dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
37dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55... 40 6.5
39gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
40emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 40 6.5
41emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5
42gb|AC004307.1|AC004307 Drosophila melanogaster DNA sequence (P1 ... 40 6.5
43gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 40 6.5 
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0085H07, complete sequence
          Length = 133291

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 398   tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
             |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 98080 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 98031



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 398   tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
             |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 97294 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 97343
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 398      tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
                |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 26848612 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 26848563



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 398      tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
                |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 26847826 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 26847875



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 406      tgaggtgcgggagctctcctatgacatgga 435
                |||||| |||||||| ||||||||||||||
Sbjct: 28030089 tgaggtccgggagctgtcctatgacatgga 28030060
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 398      tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
                |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 27175665 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 27175616



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 398      tggatgaatgaggtgcgggagctctcctatgacatggaagactccatcga 447
                |||||||| |||||||| ||||||||||| ||||| || |||| ||||||
Sbjct: 27174879 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 27174928



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 406      tgaggtgcgggagctctcctatgacatgga 435
                |||||| |||||||| ||||||||||||||
Sbjct: 28008903 tgaggtccgggagctgtcctatgacatgga 28008932
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>ref|XM_482051.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2787

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 347 tttcttctcaagatgtcagaggatgaggatcctgatg 383
           |||||||| |||||||||||||| ||| |||||||||
Sbjct: 151 tttcttctgaagatgtcagaggaagagaatcctgatg 187
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>ref|XM_480601.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2808

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 423 cctatgacatggaagactccatcgatgacttcatgca 459
           |||||||||| || |||| ||||||||||||||||||
Sbjct: 242 cctatgacatcgaggactgcatcgatgacttcatgca 278
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>ref|XM_480600.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3143

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 423 cctatgacatggaagactccatcgatgacttcatgca 459
           |||||||||| || |||| ||||||||||||||||||
Sbjct: 470 cctatgacatcgaggactgcatcgatgacttcatgca 506
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 347      tttcttctcaagatgtcagaggatgaggatcctgatg 383
                |||||||| |||||||||||||| ||| |||||||||
Sbjct: 17444876 tttcttctgaagatgtcagaggaagagaatcctgatg 17444912



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 423     cctatgacatggaagactccatcgatgacttcatgca 459
               |||||||||| || |||| ||||||||||||||||||
Sbjct: 6131955 cctatgacatcgaggactgcatcgatgacttcatgca 6131991



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 423     cctatgacatggaagactccatcgatgacttcatgca 459
               |||||||||| || |||| ||||||||||||||||||
Sbjct: 6121690 cctatgacatcgaggactgcatcgatgacttcatgca 6121726



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 344      gcgtttcttctcaagatgtcagaggatgaggatcctgatg 383
                ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 17420303 gcgttccttctcaatatgtcagaggaggagaatcctgatg 17420342



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 407      gaggtgcgggagctctcctatgacat 432
                |||||||||||||||||||| |||||
Sbjct: 17373084 gaggtgcgggagctctcctacgacat 17373059



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 411      tgcgggagctctcctatgacatggaagactccatcga 447
                |||||||||| ||||||||||| || |||| ||||||
Sbjct: 19690403 tgcgggagctatcctatgacattgaggactgcatcga 19690367



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 423    cctatgacatggaagactccatcgatga 450
              |||||||||||||||||| ||| |||||
Sbjct: 336082 cctatgacatggaagactgcattgatga 336109
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0486F07
          Length = 154926

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 423   cctatgacatggaagactccatcgatgacttcatgca 459
             |||||||||| || |||| ||||||||||||||||||
Sbjct: 87972 cctatgacatcgaggactgcatcgatgacttcatgca 88008



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 423   cctatgacatggaagactccatcgatgacttcatgca 459
             |||||||||| || |||| ||||||||||||||||||
Sbjct: 77707 cctatgacatcgaggactgcatcgatgacttcatgca 77743
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>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690C12
          Length = 139693

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 347   tttcttctcaagatgtcagaggatgaggatcctgatg 383
             |||||||| |||||||||||||| ||| |||||||||
Sbjct: 55721 tttcttctgaagatgtcagaggaagagaatcctgatg 55757



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 344   gcgtttcttctcaagatgtcagaggatgaggatcctgatg 383
             ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 31148 gcgttccttctcaatatgtcagaggaggagaatcctgatg 31187
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>dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F09, full
           insert sequence
          Length = 3143

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 423 cctatgacatggaagactccatcgatgacttcatgca 459
           |||||||||| || |||| ||||||||||||||||||
Sbjct: 470 cctatgacatcgaggactgcatcgatgacttcatgca 506
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>ref|XM_482045.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2730

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 344 gcgtttcttctcaagatgtcagaggatgaggatcctgatg 383
           ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 148 gcgttccttctcaatatgtcagaggaggagaatcctgatg 187
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>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1267_E11
          Length = 117073

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 344    gcgtttcttctcaagatgtcagaggatgaggatcctgatg 383
              ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 103927 gcgttccttctcaatatgtcagaggaggagaatcctgatg 103966



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 407   gaggtgcgggagctctcctatgacat 432
             |||||||||||||||||||| |||||
Sbjct: 56708 gaggtgcgggagctctcctacgacat 56683
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>ref|XM_482041.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 407 gaggtgcgggagctctcctatgacat 432
           |||||||||||||||||||| |||||
Sbjct: 883 gaggtgcgggagctctcctacgacat 908
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>emb|AL807833.5| Mouse DNA sequence from clone RP23-371E13 on chromosome 4, complete
             sequence
          Length = 188795

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 421   ctcctatgacatggaagactccatcgatga 450
             ||||| |||||||||||||||||| |||||
Sbjct: 58210 ctcctctgacatggaagactccattgatga 58181
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>gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, complete sequence
          Length = 176450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    cgacaggagccttgaaaccag 242
              |||||||||||||||||||||
Sbjct: 119508 cgacaggagccttgaaaccag 119528
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>ref|XM_482374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 411 tgcgggagctctcctatgacatggaagactccatcga 447
           |||||||||| ||||||||||| || |||| ||||||
Sbjct: 168 tgcgggagctatcctatgacattgaggactgcatcga 132
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>ref|XM_482373.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 411 tgcgggagctctcctatgacatggaagactccatcga 447
           |||||||||| ||||||||||| || |||| ||||||
Sbjct: 932 tgcgggagctatcctatgacattgaggactgcatcga 968
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>emb|BX883049.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 8/11
          Length = 349476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 206    gctctggtgagtgcagcgacaggag 230
              |||||||||||||||| ||||||||
Sbjct: 284228 gctctggtgagtgcagggacaggag 284204
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 411   tgcgggagctctcctatgacatggaagactccatcga 447
             |||||||||| ||||||||||| || |||| ||||||
Sbjct: 19354 tgcgggagctatcctatgacattgaggactgcatcga 19318
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>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0042B03
          Length = 167669

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 411    tgcgggagctctcctatgacatggaagactccatcga 447
              |||||||||| ||||||||||| || |||| ||||||
Sbjct: 165963 tgcgggagctatcctatgacattgaggactgcatcga 165927
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>dbj|AK071467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098J02, full
           insert sequence
          Length = 655

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 411 tgcgggagctctcctatgacatggaagactccatcga 447
           |||||||||| ||||||||||| || |||| ||||||
Sbjct: 323 tgcgggagctatcctatgacattgaggactgcatcga 287
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>ref|XM_479701.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 423 cctatgacatggaagactccatcgatga 450
           |||||||||||||||||| ||| |||||
Sbjct: 233 cctatgacatggaagactgcattgatga 260
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>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence
          Length = 194704

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 330    tcactgccatggaagcgtttcttctcaa 357
              |||||| ||| |||||||||||||||||
Sbjct: 168468 tcactgacatagaagcgtttcttctcaa 168495
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>gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete sequence
          Length = 158491

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ctggagaagctcggcgctct 264
             ||||||||||||||||||||
Sbjct: 21742 ctggagaagctcggcgctct 21723
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>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence
          Length = 203436

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    gtcagaggatgaggatcctg 380
              ||||||||||||||||||||
Sbjct: 184659 gtcagaggatgaggatcctg 184640
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     accaccttcacaaatcacaa 158
               ||||||||||||||||||||
Sbjct: 7599433 accaccttcacaaatcacaa 7599414
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>gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosome 17, complete sequence
          Length = 211198

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     gatacgcagctagccttctctctc 36
              ||||| ||||||||||||||||||
Sbjct: 184003 gatactcagctagccttctctctc 183980
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>ref|XM_783308.1| PREDICTED: Strongylocentrotus purpuratus similar to baculoviral IAP
            repeat-containing 2 (LOC583399), mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  tccatcgatgacttcatgca 459
            ||||||||||||||||||||
Sbjct: 1240 tccatcgatgacttcatgca 1259
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    accaccttcacaaatcacaa 158
              ||||||||||||||||||||
Sbjct: 115857 accaccttcacaaatcacaa 115876
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>gb|AY113487.1| Drosophila melanogaster RE46170 full insert cDNA
          Length = 559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 ctggagaagctcggcgctct 264
           ||||||||||||||||||||
Sbjct: 313 ctggagaagctcggcgctct 332
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>ref|NM_137598.2| Drosophila melanogaster Odorant-binding protein 56a CG11797-RA
           (Obp56a), mRNA
          Length = 550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 ctggagaagctcggcgctct 264
           ||||||||||||||||||||
Sbjct: 315 ctggagaagctcggcgctct 334
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>gb|AY071723.1| Drosophila melanogaster RH38644 full length cDNA
          Length = 562

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 ctggagaagctcggcgctct 264
           ||||||||||||||||||||
Sbjct: 314 ctggagaagctcggcgctct 333
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                           
Query: 379     tgatgttcaggataaggtgtggatgaatgaggtgcgggagctctcctatgacatggaaga 438
               ||||||||||| ||| | ||||| | |  ||||| ||||| | ||||||||||| |||||
Sbjct: 4840432 tgatgttcaggttaaagagtggagggaccaggtgagggagatgtcctatgacattgaaga 4840373

                           
Query: 439     ctccatcgatga 450
                | |||||||||
Sbjct: 4840372 ttgcatcgatga 4840361
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     accaccttcacaaatcacaa 158
               ||||||||||||||||||||
Sbjct: 7597268 accaccttcacaaatcacaa 7597249
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>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                         
Query: 379   tgatgttcaggataaggtgtggatgaatgaggtgcgggagctctcctatgacatggaaga 438
             ||||||||||| ||| | ||||| | |  ||||| ||||| | ||||||||||| |||||
Sbjct: 97990 tgatgttcaggttaaagagtggagggaccaggtgagggagatgtcctatgacattgaaga 98049

                         
Query: 439   ctccatcgatga 450
              | |||||||||
Sbjct: 98050 ttgcatcgatga 98061
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 423   cctatgacatggaagactccatcgatga 450
             |||||||||||||||||| ||| |||||
Sbjct: 45596 cctatgacatggaagactgcattgatga 45623
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1300_E01
          Length = 103022

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 423    cctatgacatggaagactccatcgatga 450
              |||||||||||||||||| ||| |||||
Sbjct: 102508 cctatgacatggaagactgcattgatga 102535
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>gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55 of 73 of the complete
              sequence
          Length = 248096

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    ctggagaagctcggcgctct 264
              ||||||||||||||||||||
Sbjct: 242486 ctggagaagctcggcgctct 242505
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                           
Query: 379     tgatgttcaggataaggtgtggatgaatgaggtgcgggagctctcctatgacatggaaga 438
               ||||||||||| ||| | ||||| | |  ||||| ||||| | ||||||||||| |||||
Sbjct: 4840413 tgatgttcaggttaaagagtggagggaccaggtgagggagatgtcctatgacattgaaga 4840354

                           
Query: 439     ctccatcgatga 450
                | |||||||||
Sbjct: 4840353 ttgcatcgatga 4840342
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>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                        
Query: 379  tgatgttcaggataaggtgtggatgaatgaggtgcgggagctctcctatgacatggaaga 438
            ||||||||||| ||| | ||||| | |  ||||| ||||| | ||||||||||| |||||
Sbjct: 6699 tgatgttcaggttaaagagtggagggaccaggtgagggagatgtcctatgacattgaaga 6758

                        
Query: 439  ctccatcgatga 450
             | |||||||||
Sbjct: 6759 ttgcatcgatga 6770
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>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141053

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                          
Query: 379    tgatgttcaggataaggtgtggatgaatgaggtgcgggagctctcctatgacatggaaga 438
              ||||||||||| ||| | ||||| | |  ||||| ||||| | ||||||||||| |||||
Sbjct: 119528 tgatgttcaggttaaagagtggagggaccaggtgagggagatgtcctatgacattgaaga 119587

                          
Query: 439    ctccatcgatga 450
               | |||||||||
Sbjct: 119588 ttgcatcgatga 119599
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>gb|AC004307.1|AC004307 Drosophila melanogaster DNA sequence (P1 DS02074 (D199)), complete
            sequence
          Length = 30848

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  ctggagaagctcggcgctct 264
            ||||||||||||||||||||
Sbjct: 4153 ctggagaagctcggcgctct 4134
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>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    gatacgcagctagccttctctctc 36
             ||||| ||||||||||||||||||
Sbjct: 63276 gatactcagctagccttctctctc 63253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,492,036
Number of Sequences: 3902068
Number of extensions: 3492036
Number of successful extensions: 66464
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66147
Number of HSP's gapped (non-prelim): 317
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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