>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 259   cgcgagctggctcacgggatagaggactgcatcgacagcctcatgtaccgcgc 311
             |||||||| || ||||| || ||||||||||||||| || || ||||||||||
Sbjct: 76532 cgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgtaccgcgc 76584

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 259     cgcgagctggctcacgggatagaggactgcatcgacagcctcatgtaccgcgc 311
               |||||||| || ||||| || ||||||||||||||| || || ||||||||||
Sbjct: 6467698 cgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgtaccgcgc 6467646

>dbj|AK066950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P15, full
           insert sequence
          Length = 3712

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 259 cgcgagctggctcacgggatagaggactgcatcgacagcctcatgtaccgcgc 311
           |||||||| || ||||| || ||||||||||||||| || || ||||||||||
Sbjct: 512 cgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgtaccgcgc 564

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 259     cgcgagctggctcacgggatagaggactgcatcgacagcctcatgtaccgcgc 311
               |||||||| || ||||| || ||||||||||||||| || || ||||||||||
Sbjct: 6534165 cgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgtaccgcgc 6534113

>gb|AC151359.2| Xenopus tropicalis clone ISB-76H5, complete sequence
          Length = 56452

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 279   agaggactgcatcgacagcctcatgta 305
             ||||||||||||| |||||||||||||
Sbjct: 42035 agaggactgcatctacagcctcatgta 42009

>ref|XM_469430.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 ctgcgcgagctggctcacggg 276
           |||||||||||||||||||||
Sbjct: 930 ctgcgcgagctggctcacggg 950

>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   ctgcgcgagctggctcacggg 276
             |||||||||||||||||||||
Sbjct: 61434 ctgcgcgagctggctcacggg 61454

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 256      ctgcgcgagctggctcacggg 276
                |||||||||||||||||||||
Sbjct: 27925706 ctgcgcgagctggctcacggg 27925726

>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   ctgcgcgagctggctcacggg 276
             |||||||||||||||||||||
Sbjct: 99320 ctgcgcgagctggctcacggg 99300

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 256      ctgcgcgagctggctcacggg 276
                |||||||||||||||||||||
Sbjct: 28017030 ctgcgcgagctggctcacggg 28017050

>dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H10, full
           insert sequence
          Length = 1706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 256 ctgcgcgagctggctcacggg 276
           |||||||||||||||||||||
Sbjct: 505 ctgcgcgagctggctcacggg 485

>dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E07, full
           insert sequence
          Length = 1586

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 ctgcgcgagctggctcacggg 276
           |||||||||||||||||||||
Sbjct: 932 ctgcgcgagctggctcacggg 952

>ref|NM_001035687.1| Arabidopsis thaliana dopamine beta-monooxygenase AT3G25290
           transcript variant AT3G25290.2 mRNA, complete cds
          Length = 1391

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 210 gtcttctctgctccgccggc 229

>ref|NM_113435.2| Arabidopsis thaliana dopamine beta-monooxygenase AT3G25290
           transcript variant AT3G25290.1 mRNA, complete cds
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 214 gtcttctctgctccgccggc 233

>ref|XM_544058.2| PREDICTED: Canis familiaris similar to B cell RAG associated
           protein (LOC486928), mRNA
          Length = 2259

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 4   tcgagctcgagcagccgagc 23
           ||||||||||||||||||||
Sbjct: 451 tcgagctcgagcagccgagc 470

>ref|XM_807214.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510241.124) partial mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 300 catgtaccgcgcgagctggaagca 323
           |||||||||||||| |||||||||
Sbjct: 453 catgtaccgcgcgaactggaagca 476

>gb|AC022532.13| Homo sapiens chromosome 10 clone RP11-104F15, complete sequence
          Length = 208823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   gaagcagcagtcttctctgc 337
             ||||||||||||||||||||
Sbjct: 32352 gaagcagcagtcttctctgc 32333

>gb|AC005906.1| Homo sapiens 12p13.3 BAC RPCI11-429A20 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 185952

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gactgcatcgacagcctcat 302
             ||||||||||||||||||||
Sbjct: 68054 gactgcatcgacagcctcat 68035

>gb|AY057704.1| Arabidopsis thaliana AT3g25290/MJL12_25 mRNA, complete cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 214 gtcttctctgctccgccggc 233

>emb|BX824171.1|CNS0A5H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1380

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 194 gtcttctctgctccgccggc 213

>emb|BX823803.1|CNS0A5CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS77ZE01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 189 gtcttctctgctccgccggc 208

>emb|BX823404.1|CNS0A5BC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS33ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1385

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 199 gtcttctctgctccgccggc 218

>dbj|AB181417.1| Magnolia stellata DNA, microsatellite marker stm0218
          Length = 323

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gagctggaagcagcagtctt 331
           ||||||||||||||||||||
Sbjct: 236 gagctggaagcagcagtctt 217

>ref|XM_216169.3| PREDICTED: Rattus norvegicus mitochondrial ribosomal protein L35
          (predicted) (Mrpl35_predicted), mRNA
          Length = 776

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 agatggaggccgccatcttg 60
          ||||||||||||||||||||
Sbjct: 39 agatggaggccgccatcttg 20

>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12
          Length = 81542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gtcttctctgctccgccggc 346
             ||||||||||||||||||||
Sbjct: 78072 gtcttctctgctccgccggc 78091

>gb|BT002214.1| Arabidopsis thaliana At3g25290/MJL12_25 mRNA, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 gtcttctctgctccgccggc 346
           ||||||||||||||||||||
Sbjct: 196 gtcttctctgctccgccggc 215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,870,359
Number of Sequences: 3902068
Number of extensions: 2870359
Number of successful extensions: 52279
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52159
Number of HSP's gapped (non-prelim): 120
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)