>AP4B1_HUMAN (Q9Y6B7) AP-4 complex subunit beta-1 (Adapter-related protein|
           complex 4 beta 1 subunit) (Beta subunit of AP-4) (AP-4
           adapter complex beta subunit)
          Length = 739

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 101 DLKQQLRQLAGSRAPDADDQR-RDVFKRVISCMTAGIDVSAAFGEMVLCSATSDV 262
           D+ ++L++   +    AD  R R+V +RVI  MT G+D+S  F EMV  SAT D+
Sbjct: 8   DVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATVDI 62

>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein|
           complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4
           adapter complex beta subunit)
          Length = 739

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 101 DLKQQLRQLAGSRAPDADDQR-RDVFKRVISCMTAGIDVSAAFGEMVLCSATSDV 262
           D+ ++L++   +    AD  R R+V +RVI  MT G+D+S  F EMV  SAT D+
Sbjct: 8   DVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSDVFMEMVKASATVDI 62

>AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin|
           assembly protein large beta-1 chain) (Clathrin assembly
           protein complex 1 beta-1 large chain)
          Length = 726

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +2

Query: 107 KQQLRQLAGSRAPDADDQRRDVFKRVISCMTAGIDVSAAFGEMVLCSATSDV 262
           K +L +L           R+D  K+ I  MT G DVS+ F +++   AT DV
Sbjct: 25  KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATIDV 76

>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1250

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 130 GEPCTRR**SAPGCLQAGDLLHDRRYRRLGGVRGDGA 240
           GEP   R  S+P  L A D  + R YR LGG  G G+
Sbjct: 39  GEPDPER--SSPPMLSADDAEYPREYRTLGGGGGGGS 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,891,255
Number of Sequences: 219361
Number of extensions: 537358
Number of successful extensions: 1636
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)