>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 196      ggcaggtgggcggttggtggcggc 219
                ||||||||||||||||||||||||
Sbjct: 20627217 ggcaggtgggcggttggtggcggc 20627240



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 402      ggctcgcgcccgcagctcgacctcagcggc 431
                |||||||| |||||||| ||||||||||||
Sbjct: 20627415 ggctcgcggccgcagctggacctcagcggc 20627444

>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 196   ggcaggtgggcggttggtggcggc 219
             ||||||||||||||||||||||||
Sbjct: 20828 ggcaggtgggcggttggtggcggc 20851



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 402   ggctcgcgcccgcagctcgacctcagcggc 431
             |||||||| |||||||| ||||||||||||
Sbjct: 21026 ggctcgcggccgcagctggacctcagcggc 21055

>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 196   ggcaggtgggcggttggtggcggc 219
             ||||||||||||||||||||||||
Sbjct: 92875 ggcaggtgggcggttggtggcggc 92898



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 402   ggctcgcgcccgcagctcgacctcagcggc 431
             |||||||| |||||||| ||||||||||||
Sbjct: 93073 ggctcgcggccgcagctggacctcagcggc 93102

>ref|XM_471091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 332  cgagccggaggccaaggggaaggcgccggcg 362
            ||||| ||||||||||| |||||||||||||
Sbjct: 1191 cgagctggaggccaaggagaaggcgccggcg 1221

>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete
              sequence
          Length = 152632

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 332    cgagccggaggccaaggggaaggcgccggcg 362
              ||||| ||||||||||| |||||||||||||
Sbjct: 113989 cgagctggaggccaaggagaaggcgccggcg 113959

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 332     cgagccggaggccaaggggaaggcgccggcg 362
               ||||| ||||||||||| |||||||||||||
Sbjct: 1454965 cgagctggaggccaaggagaaggcgccggcg 1454935



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 55       gccgatccccccatccatccc 75
                |||||||||||||||||||||
Sbjct: 32014911 gccgatccccccatccatccc 32014891

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 389     gatgaaccgctccggctcgcgcccg 413
               ||||| |||||||||||||||||||
Sbjct: 4758682 gatgatccgctccggctcgcgcccg 4758706

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 389     gatgaaccgctccggctcgcgcccg 413
               ||||| |||||||||||||||||||
Sbjct: 5153977 gatgatccgctccggctcgcgcccg 5154001

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 121      ccttgagatcgatcgatcgat 141
                |||||||||||||||||||||
Sbjct: 28169427 ccttgagatcgatcgatcgat 28169447

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ccttgagatcgatcgatcgat 141
             |||||||||||||||||||||
Sbjct: 24972 ccttgagatcgatcgatcgat 24992

>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    ccttgagatcgatcgatcgat 141
              |||||||||||||||||||||
Sbjct: 152723 ccttgagatcgatcgatcgat 152743

>dbj|AK099285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I11, full
           insert sequence
          Length = 3035

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 103 gccgatccccccatccatccc 123

>dbj|AK072594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125K02, full
           insert sequence
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 131 gccgatccccccatccatccc 151

>dbj|AK066646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071L19, full
           insert sequence
          Length = 2918

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 93  gccgatccccccatccatccc 113

>dbj|AK066078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050K18, full
           insert sequence
          Length = 3096

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 169 gccgatccccccatccatccc 189

>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full
            insert sequence
          Length = 1666

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  ccttgagatcgatcgatcgat 141
            |||||||||||||||||||||
Sbjct: 1245 ccttgagatcgatcgatcgat 1225

>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    gccgatccccccatccatccc 75
             |||||||||||||||||||||
Sbjct: 35618 gccgatccccccatccatccc 35598

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     gcacgccgcgagcgaggccgaaga 42
              |||||||||| |||||||||||||
Sbjct: 554117 gcacgccgcgtgcgaggccgaaga 554140

>ref|XM_482679.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 297

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 208 gttggtggcggcactgatcc 227
           ||||||||||||||||||||
Sbjct: 24  gttggtggcggcactgatcc 43

>ref|NM_190336.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 329 gcacgagccggaggccaaggggaaggcg 356
           |||||||||||||||  |||||||||||
Sbjct: 294 gcacgagccggaggcggaggggaaggcg 267

>ref|NM_190335.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 329 gcacgagccggaggccaaggggaaggcg 356
           |||||||||||||||  |||||||||||
Sbjct: 286 gcacgagccggaggcggaggggaaggcg 313

>ref|XM_390114.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG09938.1)
           partial mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 cgatcgattccgtttttgtc 153
           ||||||||||||||||||||
Sbjct: 965 cgatcgattccgtttttgtc 946

>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065G12
          Length = 165006

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 329    gcacgagccggaggccaaggggaaggcg 356
              |||||||||||||||  |||||||||||
Sbjct: 140712 gcacgagccggaggcggaggggaaggcg 140685



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 329    gcacgagccggaggccaaggggaaggcg 356
              |||||||||||||||  |||||||||||
Sbjct: 140028 gcacgagccggaggcggaggggaaggcg 140055

>gb|AC073882.4| Mus musculus strain 129/SvES Cell Line CJ7 chromosome 2 clone
             ct7-305f12, complete sequence
          Length = 130734

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   tcaaatccactggcctggaa 276
             ||||||||||||||||||||
Sbjct: 90191 tcaaatccactggcctggaa 90172

>gb|AC068952.10| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone
             ct7-254f1, complete sequence
          Length = 95292

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tcaaatccactggcctggaa 276
             ||||||||||||||||||||
Sbjct: 51538 tcaaatccactggcctggaa 51557

>gb|AC068903.11| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone
             ct7-196d19, complete sequence
          Length = 82033

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tcaaatccactggcctggaa 276
             ||||||||||||||||||||
Sbjct: 36759 tcaaatccactggcctggaa 36778

>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttgagatcgatcgatcgat 141
             ||||||||||||||||||||
Sbjct: 91485 cttgagatcgatcgatcgat 91504

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      cttgagatcgatcgatcgat 141
                ||||||||||||||||||||
Sbjct: 22636816 cttgagatcgatcgatcgat 22636835

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 329      gcacgagccggaggccaaggggaaggcg 356
                |||||||||||||||  |||||||||||
Sbjct: 39339006 gcacgagccggaggcggaggggaaggcg 39338979



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 329      gcacgagccggaggccaaggggaaggcg 356
                |||||||||||||||  |||||||||||
Sbjct: 39338322 gcacgagccggaggcggaggggaaggcg 39338349

>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0551C06
          Length = 149829

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 329    gcacgagccggaggccaaggggaaggcg 356
              |||||||||||||||  |||||||||||
Sbjct: 120252 gcacgagccggaggcggaggggaaggcg 120225



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 329    gcacgagccggaggccaaggggaaggcg 356
              |||||||||||||||  |||||||||||
Sbjct: 119568 gcacgagccggaggcggaggggaaggcg 119595

>emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chromosome 2, complete
             sequence
          Length = 199584

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tcaaatccactggcctggaa 276
             ||||||||||||||||||||
Sbjct: 47737 tcaaatccactggcctggaa 47756

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      cttgagatcgatcgatcgat 141
                ||||||||||||||||||||
Sbjct: 22649284 cttgagatcgatcgatcgat 22649303

>emb|BX088557.2| Mouse DNA sequence from clone RP23-173C23 on chromosome 2, complete
            sequence
          Length = 80320

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  tcaaatccactggcctggaa 276
            ||||||||||||||||||||
Sbjct: 9846 tcaaatccactggcctggaa 9865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,497,538
Number of Sequences: 3902068
Number of extensions: 2497538
Number of successful extensions: 56718
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56116
Number of HSP's gapped (non-prelim): 602
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)