Clone Name | bastl17h05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 236 bits (119), Expect = 4e-59 Identities = 254/299 (84%) Strand = Plus / Plus Query: 75 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 61880 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 61939 Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 61940 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 61999 Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 62000 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 62059 Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 62060 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 62119 Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373 |||||||||||| |||||| || |||||| | |||| |||||||| ||||||||||| Sbjct: 62120 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 62178
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 236 bits (119), Expect = 4e-59 Identities = 254/299 (84%) Strand = Plus / Plus Query: 75 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 16563141 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 16563200 Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 16563201 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 16563260 Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 16563261 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 16563320 Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 16563321 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 16563380 Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373 |||||||||||| |||||| || |||||| | |||| |||||||| ||||||||||| Sbjct: 16563381 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 16563439
>dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L11, full insert sequence Length = 3150 Score = 236 bits (119), Expect = 4e-59 Identities = 254/299 (84%) Strand = Plus / Plus Query: 75 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 288 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 347 Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 348 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 407 Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 408 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 467 Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 468 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 527 Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373 |||||||||||| |||||| || |||||| | |||| |||||||| ||||||||||| Sbjct: 528 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 586
>dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta1, complete cds Length = 3115 Score = 236 bits (119), Expect = 4e-59 Identities = 254/299 (84%) Strand = Plus / Plus Query: 75 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 248 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 307 Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 308 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 367 Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 368 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 427 Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 428 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 487 Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373 |||||||||||| |||||| || |||||| | |||| |||||||| ||||||||||| Sbjct: 488 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 546
>emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like protein Imb2 Length = 2838 Score = 220 bits (111), Expect = 2e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 99 ctgctagctgctcagtctccagatggtaaccttcgctcagcagcagaagccaacatcaag 158 |||||| | ||||| ||| |||||||||||||||| || |||||||| ||| ||||| Sbjct: 8 ctgctatcagctcaatctgcagatggtaaccttcgggtagtagcagaagggaacctcaag 67 Query: 159 cagttccaggagcagaatcttcccaacttcctcctatccttgtcggtggagttatcgaat 218 |||||||||||||||||||||||||||||||| || |||||||| ||||| | ||| || Sbjct: 68 cagttccaggagcagaatcttcccaacttccttctctccttgtcagtggaactttcggat 127 Query: 219 gatgaaaggccaccagagtctagaagacttgctggtattatccttaagaattcactggac 278 |||||| ||||||||||||||| ||||||||||||||||||||||||| || |||| Sbjct: 128 aatgaaaaaccaccagagtctagacgacttgctggtattatccttaagaactccttggat 187 Query: 279 gcagaagattctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcg 338 ||| | |||||||||| ||||| || ||||||||||||||||||||| |||||| || Sbjct: 188 gcaaaggattctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatca 247 Query: 339 atcaaatcgcagattaaggagtcattgctgataac 373 |||||| | |||| |||||||| ||||||||||| Sbjct: 248 atcaaacagaagataaaggagtccttgctgataac 282
>gb|BC078692.1| Rattus norvegicus testis-specific gene including a ubiquitin-likely domain, mRNA (cDNA clone MGC:93072 IMAGE:7112281), complete cds Length = 1026 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 62 gcgggcaggcgagcgagcgagcg 84
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 81 atggatatcactcagattctgctagctgctcagtc 115 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 10255004 atggatatcacacaggttctgctagctgcgcagtc 10254970
>ref|XM_975780.1| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis) (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>ref|XM_892874.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), transcript variant 2 (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>ref|XM_917486.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), transcript variant 7 (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 81 atggatatcactcagattctgctagctgctcagtc 115 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 116417 atggatatcacacaggttctgctagctgcgcagtc 116383
>dbj|AK089032.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430036P15 product:RSD-7 homolog [Rattus norvegicus], full insert sequence Length = 3087 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 41 gcgggcaggcgagcgagcgagcg 63
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 81 atggatatcactcagattctgctagctgctcagtc 115 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 10253105 atggatatcacacaggttctgctagctgcgcagtc 10253071
>gb|BC048508.1| Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), mRNA (cDNA clone IMAGE:6774262), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 1 gcgggcaggcgagcgagcgagcg 23
>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence Length = 190156 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 gcgggcaggcgagcgagcgagcg 37 ||||||||||||||||||||||| Sbjct: 55541 gcgggcaggcgagcgagcgagcg 55519
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gcgggcaggcgagcgagcgagc 36 |||||||||||||||||||||| Sbjct: 85052 gcgggcaggcgagcgagcgagc 85031
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gcgggcaggcgagcgagcgagc 36 |||||||||||||||||||||| Sbjct: 190959 gcgggcaggcgagcgagcgagc 190938
>gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 aggagctgctgattcagcaat 318 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 aggagctgctgattcagcaat 318 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 aggagctgctgattcagcaat 318 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 aggagctgctgattcagcaat 318 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aggcgggcaggcgagcgagc 32 |||||||||||||||||||| Sbjct: 82017 aggcgggcaggcgagcgagc 81998
>gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, partial cds Length = 3356 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcagaatcttcccaacttcc 189 |||||||||||||||||||| Sbjct: 1730 gcagaatcttcccaacttcc 1749
>gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217393 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 agcagaatcttcccaacttcctcctatccttg 200 |||| ||||||||||| ||| ||||||||||| Sbjct: 18245 agcacaatcttcccaagttcatcctatccttg 18276
>emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chromosome 10 Contains the 5' end of the MMP21 gene for matrix metalloproteinase 21, the UROS gene for uroporphyrinogen III synthase (congenital erythropoietic porphyria), the BCCIP gene for BRCA2 and CDKN1A interacting protein (TOK-1), the DDX32 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ10694, FLJ10889), the 5' UTR of a novel gene (LOC92565) and three CpG islands, complete sequence Length = 155699 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttgtctgggaggcgggcagg 23 |||||||||||||||||||| Sbjct: 148818 ttgtctgggaggcgggcagg 148799
>emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 684 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gccaacatcaagcagttcca 166 |||||||||||||||||||| Sbjct: 432 gccaacatcaagcagttcca 451
>emb|BX066998.1|CNS09NUY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gccaacatcaagcagttcca 166 |||||||||||||||||||| Sbjct: 447 gccaacatcaagcagttcca 466
>emb|BX063629.1|CNS09L9D Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45CC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 552 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gccaacatcaagcagttcca 166 |||||||||||||||||||| Sbjct: 442 gccaacatcaagcagttcca 461
>emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6AD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 712 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gccaacatcaagcagttcca 166 |||||||||||||||||||| Sbjct: 430 gccaacatcaagcagttcca 449
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 142120 ggcaggcgagcgagcgagcg 142139
>gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, complete sequence Length = 188534 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tccttaagaattcactggac 278 |||||||||||||||||||| Sbjct: 64567 tccttaagaattcactggac 64586
>gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213287 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 agcagaatcttcccaacttcctcctatccttg 200 |||| ||||||||||| ||| ||||||||||| Sbjct: 188251 agcacaatcttcccaagttcatcctatccttg 188282
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 20264385 ggcaggcgagcgagcgagcg 20264404
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caggcgagcgagcgagcgcg 39 |||||||||||||||||||| Sbjct: 16440780 caggcgagcgagcgagcgcg 16440799
>gb|AC010478.5|AC010478 Homo sapiens chromosome 5 clone CTD-2314G24, complete sequence Length = 126852 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ggcgggcaggcgagcgagcgagcg 37 |||||||| ||||||||||||||| Sbjct: 106614 ggcgggcaagcgagcgagcgagcg 106637
>gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete sequence Length = 68689 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cagagtctagaagacttgct 251 |||||||||||||||||||| Sbjct: 26460 cagagtctagaagacttgct 26479
>dbj|AP004613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1123_G09 Length = 107491 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 caggcgagcgagcgagcgcg 39 |||||||||||||||||||| Sbjct: 48377 caggcgagcgagcgagcgcg 48396
>dbj|AK120472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110J07, full insert sequence Length = 2011 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 35 ggcaggcgagcgagcgagcg 16
>dbj|AK101036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000D16, full insert sequence Length = 1723 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 36 ggcaggcgagcgagcgagcg 17
>dbj|AK071890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N15, full insert sequence Length = 1874 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 33 ggcaggcgagcgagcgagcg 14
>emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-176H8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170919 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 tcgcagattaaggagtcatt 364 |||||||||||||||||||| Sbjct: 51487 tcgcagattaaggagtcatt 51506
>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete sequence Length = 194065 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tgctagctgctcagtctcca 119 |||||||||||||||||||| Sbjct: 50998 tgctagctgctcagtctcca 50979
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcaggcgagcgagcgagcg 37 |||||||||||||||||||| Sbjct: 20275661 ggcaggcgagcgagcgagcg 20275680
>emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chromosome 2, complete sequence Length = 185138 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 agcagaatcttcccaacttcctcc 192 ||||||| |||||||||||||||| Sbjct: 133581 agcagaaacttcccaacttcctcc 133604
>gb|AC091860.3| Homo sapiens chromosome 5 clone CTD-2335O3, complete sequence Length = 100348 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggcgggcaggcgagcgagcgagcg 37 |||||||| ||||||||||||||| Sbjct: 85790 ggcgggcaagcgagcgagcgagcg 85767
>gb|M55173.1|DROZZDA D.hydrei Z-DNA flanking regions Length = 1516 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 caggcgagcgagcgagcgcg 39 |||||||||||||||||||| Sbjct: 370 caggcgagcgagcgagcgcg 351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,220,099 Number of Sequences: 3902068 Number of extensions: 3220099 Number of successful extensions: 71033 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70834 Number of HSP's gapped (non-prelim): 199 length of query: 376 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 354 effective length of database: 17,147,199,772 effective search space: 6070108719288 effective search space used: 6070108719288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)