ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 236 4e-59
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 236 4e-59
3dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 4e-59
4dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for ... 236 4e-59
5emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like pr... 220 2e-54
6gb|BC078692.1| Rattus norvegicus testis-specific gene including ... 46 0.081
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.081
8ref|XM_975780.1| PREDICTED: Mus musculus AN1, ubiquitin-like, ho... 46 0.081
9ref|XM_892874.2| PREDICTED: Mus musculus AN1, ubiquitin-like, ho... 46 0.081
10ref|XM_917486.2| PREDICTED: Mus musculus AN1, ubiquitin-like, ho... 46 0.081
11gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.081
12dbj|AK089032.1| Mus musculus 2 days neonate thymus thymic cells ... 46 0.081
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
14gb|BC048508.1| Mus musculus AN1, ubiquitin-like, homolog (Xenopu... 46 0.081
15gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complet... 46 0.081
16gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome... 44 0.32
17gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosom... 44 0.32
18gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (co... 42 1.3
19gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (c... 42 1.3
20gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c o... 42 1.3
21gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI... 42 1.3
22gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, com... 40 5.0
23gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, parti... 40 5.0
24gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Can... 40 5.0
25emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chr... 40 5.0
26emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-... 40 5.0
27emb|BX066998.1|CNS09NUY Single read from an extremity of a full-... 40 5.0
28emb|BX063629.1|CNS09L9D Single read from an extremity of a full-... 40 5.0
29emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-... 40 5.0
30gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno... 40 5.0
31gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, comple... 40 5.0
32gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Canc... 40 5.0
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
35gb|AC010478.5|AC010478 Homo sapiens chromosome 5 clone CTD-2314G... 40 5.0
36gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete... 40 5.0
37dbj|AP004613.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
38dbj|AK120472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
39dbj|AK101036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
40dbj|AK071890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
41emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-1... 40 5.0
42emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on ch... 40 5.0
43gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
44emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chr... 40 5.0
45gb|AC091860.3| Homo sapiens chromosome 5 clone CTD-2335O3, compl... 40 5.0
46gb|M55173.1|DROZZDA D.hydrei Z-DNA flanking regions 40 5.0

>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score =  236 bits (119), Expect = 4e-59
 Identities = 254/299 (84%)
 Strand = Plus / Plus

                                                                         
Query: 75    acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134
             |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 61880 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 61939

                                                                         
Query: 135   tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194
               || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 61940 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 61999

                                                                         
Query: 195   tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254
             |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 62000 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 62059

                                                                         
Query: 255   attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314
             |||||||||||||| ||  |||| ||| | ||||||||||  ||||| || |||||||||
Sbjct: 62060 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 62119

                                                                        
Query: 315   caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373
             |||||||||||| ||||||  || ||||||  | |||| |||||||| |||||||||||
Sbjct: 62120 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 62178



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  236 bits (119), Expect = 4e-59
 Identities = 254/299 (84%)
 Strand = Plus / Plus

                                                                            
Query: 75       acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134
                |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 16563141 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 16563200

                                                                            
Query: 135      tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194
                  || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 16563201 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 16563260

                                                                            
Query: 195      tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254
                |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 16563261 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 16563320

                                                                            
Query: 255      attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314
                |||||||||||||| ||  |||| ||| | ||||||||||  ||||| || |||||||||
Sbjct: 16563321 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 16563380

                                                                           
Query: 315      caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373
                |||||||||||| ||||||  || ||||||  | |||| |||||||| |||||||||||
Sbjct: 16563381 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 16563439



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>dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L11, full
           insert sequence
          Length = 3150

 Score =  236 bits (119), Expect = 4e-59
 Identities = 254/299 (84%)
 Strand = Plus / Plus

                                                                       
Query: 75  acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134
           |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 288 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 347

                                                                       
Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194
             || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 348 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 407

                                                                       
Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254
           |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 408 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 467

                                                                       
Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314
           |||||||||||||| ||  |||| ||| | ||||||||||  ||||| || |||||||||
Sbjct: 468 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 527

                                                                      
Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373
           |||||||||||| ||||||  || ||||||  | |||| |||||||| |||||||||||
Sbjct: 528 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 586



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>dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta1,
           complete cds
          Length = 3115

 Score =  236 bits (119), Expect = 4e-59
 Identities = 254/299 (84%)
 Strand = Plus / Plus

                                                                       
Query: 75  acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 134
           |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 248 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 307

                                                                       
Query: 135 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 194
             || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 308 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 367

                                                                       
Query: 195 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 254
           |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 368 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 427

                                                                       
Query: 255 attatccttaagaattcactggacgcagaagattctgcaaggaaggagctgctgattcag 314
           |||||||||||||| ||  |||| ||| | ||||||||||  ||||| || |||||||||
Sbjct: 428 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 487

                                                                      
Query: 315 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataac 373
           |||||||||||| ||||||  || ||||||  | |||| |||||||| |||||||||||
Sbjct: 488 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataac 546



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>emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like protein Imb2
          Length = 2838

 Score =  220 bits (111), Expect = 2e-54
 Identities = 234/275 (85%)
 Strand = Plus / Plus

                                                                       
Query: 99  ctgctagctgctcagtctccagatggtaaccttcgctcagcagcagaagccaacatcaag 158
           |||||| | ||||| ||| ||||||||||||||||   || ||||||||  ||| |||||
Sbjct: 8   ctgctatcagctcaatctgcagatggtaaccttcgggtagtagcagaagggaacctcaag 67

                                                                       
Query: 159 cagttccaggagcagaatcttcccaacttcctcctatccttgtcggtggagttatcgaat 218
           |||||||||||||||||||||||||||||||| || |||||||| |||||  | ||| ||
Sbjct: 68  cagttccaggagcagaatcttcccaacttccttctctccttgtcagtggaactttcggat 127

                                                                       
Query: 219 gatgaaaggccaccagagtctagaagacttgctggtattatccttaagaattcactggac 278
            ||||||  ||||||||||||||| ||||||||||||||||||||||||| ||  |||| 
Sbjct: 128 aatgaaaaaccaccagagtctagacgacttgctggtattatccttaagaactccttggat 187

                                                                       
Query: 279 gcagaagattctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcg 338
           ||| | ||||||||||  ||||| || ||||||||||||||||||||| ||||||  || 
Sbjct: 188 gcaaaggattctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatca 247

                                              
Query: 339 atcaaatcgcagattaaggagtcattgctgataac 373
           ||||||  | |||| |||||||| |||||||||||
Sbjct: 248 atcaaacagaagataaaggagtccttgctgataac 282



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>gb|BC078692.1| Rattus norvegicus testis-specific gene including a
          ubiquitin-likely domain, mRNA (cDNA clone MGC:93072
          IMAGE:7112281), complete cds
          Length = 1026

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 62 gcgggcaggcgagcgagcgagcg 84



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 81       atggatatcactcagattctgctagctgctcagtc 115
                ||||||||||| ||| ||||||||||||| |||||
Sbjct: 10255004 atggatatcacacaggttctgctagctgcgcagtc 10254970



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>ref|XM_975780.1| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus
          laevis) (Anubl1), mRNA
          Length = 2536

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 27 gcgggcaggcgagcgagcgagcg 49



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>ref|XM_892874.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus
          laevis), transcript variant 2 (Anubl1), mRNA
          Length = 2536

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 27 gcgggcaggcgagcgagcgagcg 49



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>ref|XM_917486.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus
          laevis), transcript variant 7 (Anubl1), mRNA
          Length = 2536

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 27 gcgggcaggcgagcgagcgagcg 49



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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 81     atggatatcactcagattctgctagctgctcagtc 115
              ||||||||||| ||| ||||||||||||| |||||
Sbjct: 116417 atggatatcacacaggttctgctagctgcgcagtc 116383



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>dbj|AK089032.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
          full-length enriched library, clone:E430036P15
          product:RSD-7 homolog [Rattus norvegicus], full insert
          sequence
          Length = 3087

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 41 gcgggcaggcgagcgagcgagcg 63



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 81       atggatatcactcagattctgctagctgctcagtc 115
                ||||||||||| ||| ||||||||||||| |||||
Sbjct: 10253105 atggatatcacacaggttctgctagctgcgcagtc 10253071



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>gb|BC048508.1| Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), mRNA
          (cDNA clone IMAGE:6774262), complete cds
          Length = 905

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 gcgggcaggcgagcgagcgagcg 37
          |||||||||||||||||||||||
Sbjct: 1  gcgggcaggcgagcgagcgagcg 23



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>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence
          Length = 190156

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 15    gcgggcaggcgagcgagcgagcg 37
             |||||||||||||||||||||||
Sbjct: 55541 gcgggcaggcgagcgagcgagcg 55519



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>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence
          Length = 156190

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 15    gcgggcaggcgagcgagcgagc 36
             ||||||||||||||||||||||
Sbjct: 85052 gcgggcaggcgagcgagcgagc 85031



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>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence
          Length = 220771

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 15     gcgggcaggcgagcgagcgagc 36
              ||||||||||||||||||||||
Sbjct: 190959 gcgggcaggcgagcgagcgagc 190938



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>gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (coxI) gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 aggagctgctgattcagcaat 318
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346



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>gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (coxI) gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 aggagctgctgattcagcaat 318
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346



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>gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c oxidase (coxI) gene,
           mitochondrial gene encoding mitochondrial protein,
           partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 aggagctgctgattcagcaat 318
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346



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>gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 1415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 aggagctgctgattcagcaat 318
           |||||||||||||||||||||
Sbjct: 326 aggagctgctgattcagcaat 346



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>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    aggcgggcaggcgagcgagc 32
             ||||||||||||||||||||
Sbjct: 82017 aggcgggcaggcgagcgagc 81998



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>gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, partial cds
          Length = 3356

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gcagaatcttcccaacttcc 189
            ||||||||||||||||||||
Sbjct: 1730 gcagaatcttcccaacttcc 1749



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>gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 217393

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 169   agcagaatcttcccaacttcctcctatccttg 200
             |||| ||||||||||| ||| |||||||||||
Sbjct: 18245 agcacaatcttcccaagttcatcctatccttg 18276



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>emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chromosome 10 Contains the 5'
              end of the MMP21 gene for matrix metalloproteinase 21, the
              UROS gene for uroporphyrinogen III synthase (congenital
              erythropoietic porphyria), the BCCIP gene for BRCA2 and
              CDKN1A interacting protein (TOK-1), the DDX32 gene for
              DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ10694,
              FLJ10889), the 5' UTR of a novel gene (LOC92565) and three
              CpG islands, complete sequence
          Length = 155699

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ttgtctgggaggcgggcagg 23
              ||||||||||||||||||||
Sbjct: 148818 ttgtctgggaggcgggcagg 148799



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>emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC7AA12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 684

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gccaacatcaagcagttcca 166
           ||||||||||||||||||||
Sbjct: 432 gccaacatcaagcagttcca 451



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>emb|BX066998.1|CNS09NUY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC50CA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 869

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gccaacatcaagcagttcca 166
           ||||||||||||||||||||
Sbjct: 447 gccaacatcaagcagttcca 466



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>emb|BX063629.1|CNS09L9D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45CC12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 552

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gccaacatcaagcagttcca 166
           ||||||||||||||||||||
Sbjct: 442 gccaacatcaagcagttcca 461



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>emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA6AD09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 712

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gccaacatcaagcagttcca 166
           ||||||||||||||||||||
Sbjct: 430 gccaacatcaagcagttcca 449



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>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
              sequence
          Length = 194361

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     ggcaggcgagcgagcgagcg 37
              ||||||||||||||||||||
Sbjct: 142120 ggcaggcgagcgagcgagcg 142139



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>gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, complete sequence
          Length = 188534

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tccttaagaattcactggac 278
             ||||||||||||||||||||
Sbjct: 64567 tccttaagaattcactggac 64586



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>gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213287

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 169    agcagaatcttcccaacttcctcctatccttg 200
              |||| ||||||||||| ||| |||||||||||
Sbjct: 188251 agcacaatcttcccaagttcatcctatccttg 188282



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       ggcaggcgagcgagcgagcg 37
                ||||||||||||||||||||
Sbjct: 20264385 ggcaggcgagcgagcgagcg 20264404



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       caggcgagcgagcgagcgcg 39
                ||||||||||||||||||||
Sbjct: 16440780 caggcgagcgagcgagcgcg 16440799



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>gb|AC010478.5|AC010478 Homo sapiens chromosome 5 clone CTD-2314G24, complete sequence
          Length = 126852

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     ggcgggcaggcgagcgagcgagcg 37
              |||||||| |||||||||||||||
Sbjct: 106614 ggcgggcaagcgagcgagcgagcg 106637



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>gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete sequence
          Length = 68689

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   cagagtctagaagacttgct 251
             ||||||||||||||||||||
Sbjct: 26460 cagagtctagaagacttgct 26479



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>dbj|AP004613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1123_G09
          Length = 107491

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    caggcgagcgagcgagcgcg 39
             ||||||||||||||||||||
Sbjct: 48377 caggcgagcgagcgagcgcg 48396



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>dbj|AK120472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110J07,
          full insert sequence
          Length = 2011

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 18 ggcaggcgagcgagcgagcg 37
          ||||||||||||||||||||
Sbjct: 35 ggcaggcgagcgagcgagcg 16



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>dbj|AK101036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000D16,
          full insert sequence
          Length = 1723

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 18 ggcaggcgagcgagcgagcg 37
          ||||||||||||||||||||
Sbjct: 36 ggcaggcgagcgagcgagcg 17



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>dbj|AK071890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N15,
          full insert sequence
          Length = 1874

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 18 ggcaggcgagcgagcgagcg 37
          ||||||||||||||||||||
Sbjct: 33 ggcaggcgagcgagcgagcg 14



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>emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-176H8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tcgcagattaaggagtcatt 364
             ||||||||||||||||||||
Sbjct: 51487 tcgcagattaaggagtcatt 51506



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>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete
             sequence
          Length = 194065

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tgctagctgctcagtctcca 119
             ||||||||||||||||||||
Sbjct: 50998 tgctagctgctcagtctcca 50979



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       ggcaggcgagcgagcgagcg 37
                ||||||||||||||||||||
Sbjct: 20275661 ggcaggcgagcgagcgagcg 20275680



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>emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chromosome 2, complete
              sequence
          Length = 185138

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 169    agcagaatcttcccaacttcctcc 192
              ||||||| ||||||||||||||||
Sbjct: 133581 agcagaaacttcccaacttcctcc 133604



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>gb|AC091860.3| Homo sapiens chromosome 5 clone CTD-2335O3, complete sequence
          Length = 100348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    ggcgggcaggcgagcgagcgagcg 37
             |||||||| |||||||||||||||
Sbjct: 85790 ggcgggcaagcgagcgagcgagcg 85767



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>gb|M55173.1|DROZZDA D.hydrei Z-DNA flanking regions
          Length = 1516

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  caggcgagcgagcgagcgcg 39
           ||||||||||||||||||||
Sbjct: 370 caggcgagcgagcgagcgcg 351


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,220,099
Number of Sequences: 3902068
Number of extensions: 3220099
Number of successful extensions: 71033
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70834
Number of HSP's gapped (non-prelim): 199
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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