ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (L... 31 0.85
2LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) ... 30 1.1
3EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysi... 30 1.9
4EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysi... 29 3.2

>LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (Laminin chain|
           B3)
          Length = 1801

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 154 SSRPEKGRRGWPWPWPLDLGTRVPDLPTTTAR 59
           S +P +GR+G P PW L LG  +  L  T A+
Sbjct: 5   SGKPGRGRQGQPVPWELRLGLLLSVLAATLAQ 36



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>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)|
          Length = 1799

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 154 SSRPEKGRRGWPWPWPLDLGTRVPDLPTTTAR 59
           S  P +GR+G P PW L LG  +  L  T A+
Sbjct: 5   SGEPGRGRQGQPLPWELRLGLLLSVLAATLAQ 36



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>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1210

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 69  VVGRSGTRVPKSSGHGHGQPRRP 137
           V GR+ T  P +   GHG+PRRP
Sbjct: 572 VPGRADTSQPSARMRGHGEPRRP 594



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>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1263

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 75  GRSGTRVPKSSGHGHGQPRRP 137
           GR+ T  P +   GHG+PRRP
Sbjct: 627 GRADTSQPSARMRGHGEPRRP 647


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.299    0.119    0.329 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,033,441
Number of Sequences: 219361
Number of extensions: 220424
Number of successful extensions: 530
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
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