ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK045104.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 48 0.020
2gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, co... 48 0.020
3dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.077
4gb|AC123992.8| Mus musculus chromosome 15, clone RP24-308E20, co... 44 0.30
5gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosom... 44 0.30
6gb|AC157772.4| Mus musculus chromosome 15, clone RP24-323B16, co... 44 0.30
7dbj|AK106512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
8dbj|AK103386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
9emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chro... 44 0.30
10emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 ... 42 1.2
11ref|XM_843612.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.2
12gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosom... 42 1.2
13emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 m... 42 1.2
14dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.2
15ref|XM_684238.1| PREDICTED: Danio rerio similar to multiple PDZ ... 42 1.2
16dbj|AP000034.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 42 1.2
17emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, co... 42 1.2
18dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.2
19emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.2
20gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, comple... 42 1.2
21dbj|AP000266.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 1.2
22dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 1.2
23dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 42 1.2
24ref|NM_184979.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
25ref|NM_197088.1| Oryza sativa (japonica cultivar-group) putative... 40 4.8
26gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 4.8
27ref|XM_425393.1| PREDICTED: Gallus gallus (clone C8) CASP (CASP)... 40 4.8
28ref|XM_870651.1| PREDICTED: Bos taurus similar to PR domain cont... 40 4.8
29gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, c... 40 4.8
30gb|AY915872.1| Schistosoma japonicum SJCHGC09808 protein mRNA, c... 40 4.8
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.8
32emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on ch... 40 4.8
33gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete se... 40 4.8
34gb|AF067153.1| Drosophila melanogaster PIP82 protein mRNA, compl... 40 4.8
35gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 40 4.8
36gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 40 4.8
37ref|NM_132259.2| Drosophila melanogaster PIP82 CG11219-RA (PIP82... 40 4.8
38gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, compl... 40 4.8
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
42gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, co... 40 4.8
43gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell... 40 4.8
44dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 4.8
45dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.8
46dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
47emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-7... 40 4.8
48gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 ... 40 4.8
49emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-4... 40 4.8
50ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 4.8
51gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, c... 40 4.8
52gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosom... 40 4.8
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
54emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.8
55gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complet... 40 4.8
56gb|AC146298.4| Mus musculus BAC clone RP23-214O2 from 6, complet... 40 4.8
57gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, comple... 40 4.8
58emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chro... 40 4.8
59emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 4.8
60gb|M25383.1|HUMIGHHSG4 Human mutant germline Ig H-chain DNA with... 40 4.8
61emb|AL901608.1|CNS08CBC Human chromosome 14 DNA sequence Partial... 40 4.8

>dbj|AK045104.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130033A13
           product:unclassifiable, full insert sequence
          Length = 1689

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 106 gtggccatggccatggccagcctc 129
           ||||||||||||||||||||||||
Sbjct: 82  gtggccatggccatggccagcctc 105



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>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence
          Length = 190133

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 106   gtggccatggccatggccagcctc 129
             ||||||||||||||||||||||||
Sbjct: 63423 gtggccatggccatggccagcctc 63446



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>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1642C07
          Length = 206004

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 13    gccgctctcctctcttcctcagccgct 39
             |||||||||||||||| ||||||||||
Sbjct: 35877 gccgctctcctctctttctcagccgct 35851



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>gb|AC123992.8| Mus musculus chromosome 15, clone RP24-308E20, complete sequence
          Length = 170609

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 188    tagtcctcctcctcccacgcctccgaattcctctccgcctcc 229
              |||| ||||||||||||| ||||| | ||||||||| |||||
Sbjct: 102297 tagttctcctcctcccactcctcccagttcctctcctcctcc 102338



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>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence
          Length = 192042

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 106    gtggccatggccatggccagcc 127
              ||||||||||||||||||||||
Sbjct: 152489 gtggccatggccatggccagcc 152468



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>gb|AC157772.4| Mus musculus chromosome 15, clone RP24-323B16, complete sequence
          Length = 182149

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 188   tagtcctcctcctcccacgcctccgaattcctctccgcctcc 229
             |||| ||||||||||||| ||||| | ||||||||| |||||
Sbjct: 83530 tagttctcctcctcccactcctcccagttcctctcctcctcc 83489



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>dbj|AK106512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A06, full
           insert sequence
          Length = 1462

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 107 tggccatggccatggccagcct 128
           ||||||||||||||||||||||
Sbjct: 550 tggccatggccatggccagcct 529



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>dbj|AK103386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127H23, full
            insert sequence
          Length = 2140

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 107  tggccatggccatggccagcct 128
            ||||||||||||||||||||||
Sbjct: 1240 tggccatggccatggccagcct 1219



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>emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chromosome 4, complete
              sequence
          Length = 189029

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 107    tggccatggccatggccagcct 128
              ||||||||||||||||||||||
Sbjct: 172976 tggccatggccatggccagcct 172955



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>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete
              sequence
          Length = 174216

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    cccagccctagtcctcctcct 200
              |||||||||||||||||||||
Sbjct: 143939 cccagccctagtcctcctcct 143919



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>ref|XM_843612.1| PREDICTED: Canis familiaris hypothetical protein LOC607049
           (LOC607049), mRNA
          Length = 983

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 tgctgctgattctgattctca 356
           |||||||||||||||||||||
Sbjct: 934 tgctgctgattctgattctca 954



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>gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosome 17, complete
             sequence
          Length = 171992

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   gccggaacccgaagccgacga 287
             |||||||||||||||||||||
Sbjct: 76511 gccggaacccgaagccgacga 76531



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>emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 map q21.1, complete
             sequence
          Length = 153753

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cccagccctagtcctcctcct 200
             |||||||||||||||||||||
Sbjct: 93988 cccagccctagtcctcctcct 93968



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 115     gccatggccagcctcgccgcc 135
               |||||||||||||||||||||
Sbjct: 1285199 gccatggccagcctcgccgcc 1285179



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>ref|XM_684238.1| PREDICTED: Danio rerio similar to multiple PDZ domain protein
           (LOC560839), mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 16  gctctcctctcttcctcagcc 36
           |||||||||||||||||||||
Sbjct: 172 gctctcctctcttcctcagcc 152



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>dbj|AP000034.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 5/28,
           complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 cccagccctagtcctcctcct 200
           |||||||||||||||||||||
Sbjct: 286 cccagccctagtcctcctcct 306



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>emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, complete sequence
          Length = 170304

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    gctctcctctcttcctcagcc 36
             |||||||||||||||||||||
Sbjct: 68770 gctctcctctcttcctcagcc 68750



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>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    cccagccctagtcctcctcct 200
              |||||||||||||||||||||
Sbjct: 273774 cccagccctagtcctcctcct 273754



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     ggtctcgccgtcgtcgtcggt 77
              |||||||||||||||||||||
Sbjct: 858991 ggtctcgccgtcgtcgtcggt 858971



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>gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, complete sequence
          Length = 186567

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 105   agtggccatggccatggccagcctc 129
             ||||||| |||||||||||||||||
Sbjct: 16384 agtggccgtggccatggccagcctc 16408



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>dbj|AP000266.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T255, complete sequence
          Length = 65058

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cccagccctagtcctcctcct 200
             |||||||||||||||||||||
Sbjct: 46877 cccagccctagtcctcctcct 46857



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>dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 5/21, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cccagccctagtcctcctcct 200
             |||||||||||||||||||||
Sbjct: 36613 cccagccctagtcctcctcct 36593



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>dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 5/20
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cccagccctagtcctcctcct 200
             |||||||||||||||||||||
Sbjct: 36613 cccagccctagtcctcctcct 36593



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>ref|NM_184979.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 ttcctctccgcctccgcctc 234
           ||||||||||||||||||||
Sbjct: 232 ttcctctccgcctccgcctc 251



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>ref|NM_197088.1| Oryza sativa (japonica cultivar-group) putative tetratricopeptide
           repeat protein (OSJNBa0029C15.16), mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ctcgccgccccttctccggc 146
           ||||||||||||||||||||
Sbjct: 484 ctcgccgccccttctccggc 465



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     tggccatggccagcctcgcc 132
               ||||||||||||||||||||
Sbjct: 5659544 tggccatggccagcctcgcc 5659563



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>ref|XM_425393.1| PREDICTED: Gallus gallus (clone C8) CASP (CASP), mRNA
          Length = 12126

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ctgctgctccctccagcttc 166
             ||||||||||||||||||||
Sbjct: 10774 ctgctgctccctccagcttc 10793



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>ref|XM_870651.1| PREDICTED: Bos taurus similar to PR domain containing 12
           (LOC618320), mRNA
          Length = 1362

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 ccgcctccgcctcagagccc 241
           ||||||||||||||||||||
Sbjct: 255 ccgcctccgcctcagagccc 274



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>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence
          Length = 188948

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tgctgctgattctgattctc 355
             ||||||||||||||||||||
Sbjct: 49054 tgctgctgattctgattctc 49035



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>gb|AY915872.1| Schistosoma japonicum SJCHGC09808 protein mRNA, complete cds
          Length = 920

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 ccgcaccctccccttccccc 264
           ||||||||||||||||||||
Sbjct: 314 ccgcaccctccccttccccc 295



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      ttcctctccgcctccgcctc 234
                ||||||||||||||||||||
Sbjct: 32003420 ttcctctccgcctccgcctc 32003439



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>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two
             novel genes (FLJ36774) and five CpG islands, complete
             sequence
          Length = 158335

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cagtggccatggccatggcc 123
             ||||||||||||||||||||
Sbjct: 92398 cagtggccatggccatggcc 92379



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>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence
          Length = 42022

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   ttcctctccgcctccgcctc 234
             ||||||||||||||||||||
Sbjct: 38208 ttcctctccgcctccgcctc 38189



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>gb|AF067153.1| Drosophila melanogaster PIP82 protein mRNA, complete cds
          Length = 4001

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 193  ctcctcctcccacgcctccgaattcctctccgcctc 228
            ||||||||||  | ||||||||| ||||||||||||
Sbjct: 2857 ctcctcctcctcctcctccgaatccctctccgcctc 2822



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>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ttcctctccgcctccgcctc 234
             ||||||||||||||||||||
Sbjct: 95372 ttcctctccgcctccgcctc 95391



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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence,
            complete sequence
          Length = 178158

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  ttcctctccgcctccgcctc 234
            ||||||||||||||||||||
Sbjct: 4545 ttcctctccgcctccgcctc 4564



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>ref|NM_132259.2| Drosophila melanogaster PIP82 CG11219-RA (PIP82), mRNA
          Length = 3786

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 193  ctcctcctcccacgcctccgaattcctctccgcctc 228
            ||||||||||  | ||||||||| ||||||||||||
Sbjct: 2667 ctcctcctcctcctcctccgaatccctctccgcctc 2632



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>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence
          Length = 185844

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    ccctccccttcccccgagcc 269
              ||||||||||||||||||||
Sbjct: 113358 ccctccccttcccccgagcc 113377



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 217      cctctccgcctccgcctcag 236
                ||||||||||||||||||||
Sbjct: 24842523 cctctccgcctccgcctcag 24842504



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 3        ctcttcctcagccgctctcctctc 26
                ||||||||||||| ||||||||||
Sbjct: 19842319 ctcttcctcagcctctctcctctc 19842296



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      ttcctctccgcctccgcctc 234
                ||||||||||||||||||||
Sbjct: 32093932 ttcctctccgcctccgcctc 32093951



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>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence
          Length = 203534

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ccctccagcttcacctccta 174
             ||||||||||||||||||||
Sbjct: 46066 ccctccagcttcacctccta 46047



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>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174367

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 193    ctcctcctcccacgcctccgaattcctctccgcctc 228
              ||||||||||  | ||||||||| ||||||||||||
Sbjct: 116980 ctcctcctcctcctcctccgaatccctctccgcctc 117015



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 261     ccccgagccggaacccgaag 280
               ||||||||||||||||||||
Sbjct: 2233141 ccccgagccggaacccgaag 2233122



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      gtctcgccgtcgtcgtcggt 77
               ||||||||||||||||||||
Sbjct: 4481673 gtctcgccgtcgtcgtcggt 4481692



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>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0551A03
          Length = 173027

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      ctcttcctcagccgctctcctctc 26
              ||||||||||||| ||||||||||
Sbjct: 109364 ctcttcctcagcctctctcctctc 109341



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>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176237

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cagtggccatggccatggcc 123
             ||||||||||||||||||||
Sbjct: 46688 cagtggccatggccatggcc 46707



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>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete
              sequence
          Length = 299633

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 193    ctcctcctcccacgcctccgaattcctctccgcctc 228
              ||||||||||  | ||||||||| ||||||||||||
Sbjct: 111434 ctcctcctcctcctcctccgaatccctctccgcctc 111469



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>emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-417P24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169802

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cagtggccatggccatggcc 123
             ||||||||||||||||||||
Sbjct: 25645 cagtggccatggccatggcc 25626



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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     cagtggccatggccatggcc 123
               ||||||||||||||||||||
Sbjct: 1212189 cagtggccatggccatggcc 1212208



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     cagtggccatggccatggcc 123
               ||||||||||||||||||||
Sbjct: 1096966 cagtggccatggccatggcc 1096985



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     cagtggccatggccatggcc 123
               ||||||||||||||||||||
Sbjct: 1067593 cagtggccatggccatggcc 1067612



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>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence
          Length = 172721

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tgctgctgattctgattctc 355
              ||||||||||||||||||||
Sbjct: 106765 tgctgctgattctgattctc 106746



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>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete
             sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ccctccagcttcacctccta 174
             ||||||||||||||||||||
Sbjct: 33636 ccctccagcttcacctccta 33655



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 217      cctctccgcctccgcctcag 236
                ||||||||||||||||||||
Sbjct: 24770729 cctctccgcctccgcctcag 24770710



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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cctctccgcctccgcctcag 236
              ||||||||||||||||||||
Sbjct: 122345 cctctccgcctccgcctcag 122364



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>gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complete sequence
          Length = 193191

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gacaaacaggaggaggatgc 338
             ||||||||||||||||||||
Sbjct: 96456 gacaaacaggaggaggatgc 96475



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>gb|AC146298.4| Mus musculus BAC clone RP23-214O2 from 6, complete sequence
          Length = 180505

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ccatggccatggccagcctc 129
             ||||||||||||||||||||
Sbjct: 64241 ccatggccatggccagcctc 64260



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>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence
          Length = 184203

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 307   gacaaacaacaagacaaacaggag 330
             |||||||| |||||||||||||||
Sbjct: 90562 gacaaacagcaagacaaacaggag 90585



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>emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chromosome 4, complete
             sequence
          Length = 160873

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gtccccaaatccagtggcca 112
             ||||||||||||||||||||
Sbjct: 57408 gtccccaaatccagtggcca 57427



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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    agtcctcctcctcccacgcc 208
              ||||||||||||||||||||
Sbjct: 435052 agtcctcctcctcccacgcc 435071



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>gb|M25383.1|HUMIGHHSG4 Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2,
           IgG4 and IgA1, clone pBR0.9cos4
          Length = 892

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 agtggccatggccatggcca 124
           ||||||||||||||||||||
Sbjct: 398 agtggccatggccatggcca 417



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>emb|AL901608.1|CNS08CBC Human chromosome 14 DNA sequence Partial sequence from BAC
             C-2194O15_PCR1 of library CalTech-D from chromosome 14 of
             Homo sapiens (Human), complete sequence
          Length = 38314

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cagtggccatggccatggcc 123
             ||||||||||||||||||||
Sbjct: 16897 cagtggccatggccatggcc 16916


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,368,531
Number of Sequences: 3902068
Number of extensions: 4368531
Number of successful extensions: 108544
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107634
Number of HSP's gapped (non-prelim): 910
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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