Clone Name | bastl17h04 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK045104.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130033A13 product:unclassifiable, full insert sequence Length = 1689 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 106 gtggccatggccatggccagcctc 129 |||||||||||||||||||||||| Sbjct: 82 gtggccatggccatggccagcctc 105
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 106 gtggccatggccatggccagcctc 129 |||||||||||||||||||||||| Sbjct: 63423 gtggccatggccatggccagcctc 63446
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Minus Query: 13 gccgctctcctctcttcctcagccgct 39 |||||||||||||||| |||||||||| Sbjct: 35877 gccgctctcctctctttctcagccgct 35851
>gb|AC123992.8| Mus musculus chromosome 15, clone RP24-308E20, complete sequence Length = 170609 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 188 tagtcctcctcctcccacgcctccgaattcctctccgcctcc 229 |||| ||||||||||||| ||||| | ||||||||| ||||| Sbjct: 102297 tagttctcctcctcccactcctcccagttcctctcctcctcc 102338
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gtggccatggccatggccagcc 127 |||||||||||||||||||||| Sbjct: 152489 gtggccatggccatggccagcc 152468
>gb|AC157772.4| Mus musculus chromosome 15, clone RP24-323B16, complete sequence Length = 182149 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Minus Query: 188 tagtcctcctcctcccacgcctccgaattcctctccgcctcc 229 |||| ||||||||||||| ||||| | ||||||||| ||||| Sbjct: 83530 tagttctcctcctcccactcctcccagttcctctcctcctcc 83489
>dbj|AK106512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A06, full insert sequence Length = 1462 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 tggccatggccatggccagcct 128 |||||||||||||||||||||| Sbjct: 550 tggccatggccatggccagcct 529
>dbj|AK103386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127H23, full insert sequence Length = 2140 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 tggccatggccatggccagcct 128 |||||||||||||||||||||| Sbjct: 1240 tggccatggccatggccagcct 1219
>emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chromosome 4, complete sequence Length = 189029 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 tggccatggccatggccagcct 128 |||||||||||||||||||||| Sbjct: 172976 tggccatggccatggccagcct 172955
>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete sequence Length = 174216 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 143939 cccagccctagtcctcctcct 143919
>ref|XM_843612.1| PREDICTED: Canis familiaris hypothetical protein LOC607049 (LOC607049), mRNA Length = 983 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tgctgctgattctgattctca 356 ||||||||||||||||||||| Sbjct: 934 tgctgctgattctgattctca 954
>gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosome 17, complete sequence Length = 171992 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 gccggaacccgaagccgacga 287 ||||||||||||||||||||| Sbjct: 76511 gccggaacccgaagccgacga 76531
>emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 map q21.1, complete sequence Length = 153753 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 93988 cccagccctagtcctcctcct 93968
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gccatggccagcctcgccgcc 135 ||||||||||||||||||||| Sbjct: 1285199 gccatggccagcctcgccgcc 1285179
>ref|XM_684238.1| PREDICTED: Danio rerio similar to multiple PDZ domain protein (LOC560839), mRNA Length = 2286 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gctctcctctcttcctcagcc 36 ||||||||||||||||||||| Sbjct: 172 gctctcctctcttcctcagcc 152
>dbj|AP000034.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 5/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 286 cccagccctagtcctcctcct 306
>emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, complete sequence Length = 170304 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gctctcctctcttcctcagcc 36 ||||||||||||||||||||| Sbjct: 68770 gctctcctctcttcctcagcc 68750
>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 273774 cccagccctagtcctcctcct 273754
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ggtctcgccgtcgtcgtcggt 77 ||||||||||||||||||||| Sbjct: 858991 ggtctcgccgtcgtcgtcggt 858971
>gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, complete sequence Length = 186567 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 agtggccatggccatggccagcctc 129 ||||||| ||||||||||||||||| Sbjct: 16384 agtggccgtggccatggccagcctc 16408
>dbj|AP000266.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:T255, complete sequence Length = 65058 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 46877 cccagccctagtcctcctcct 46857
>dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 5/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 36613 cccagccctagtcctcctcct 36593
>dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 5/20 Length = 100000 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cccagccctagtcctcctcct 200 ||||||||||||||||||||| Sbjct: 36613 cccagccctagtcctcctcct 36593
>ref|NM_184979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 726 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 232 ttcctctccgcctccgcctc 251
>ref|NM_197088.1| Oryza sativa (japonica cultivar-group) putative tetratricopeptide repeat protein (OSJNBa0029C15.16), mRNA Length = 1647 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctcgccgccccttctccggc 146 |||||||||||||||||||| Sbjct: 484 ctcgccgccccttctccggc 465
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tggccatggccagcctcgcc 132 |||||||||||||||||||| Sbjct: 5659544 tggccatggccagcctcgcc 5659563
>ref|XM_425393.1| PREDICTED: Gallus gallus (clone C8) CASP (CASP), mRNA Length = 12126 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ctgctgctccctccagcttc 166 |||||||||||||||||||| Sbjct: 10774 ctgctgctccctccagcttc 10793
>ref|XM_870651.1| PREDICTED: Bos taurus similar to PR domain containing 12 (LOC618320), mRNA Length = 1362 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ccgcctccgcctcagagccc 241 |||||||||||||||||||| Sbjct: 255 ccgcctccgcctcagagccc 274
>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence Length = 188948 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tgctgctgattctgattctc 355 |||||||||||||||||||| Sbjct: 49054 tgctgctgattctgattctc 49035
>gb|AY915872.1| Schistosoma japonicum SJCHGC09808 protein mRNA, complete cds Length = 920 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ccgcaccctccccttccccc 264 |||||||||||||||||||| Sbjct: 314 ccgcaccctccccttccccc 295
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 32003420 ttcctctccgcctccgcctc 32003439
>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two novel genes (FLJ36774) and five CpG islands, complete sequence Length = 158335 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 92398 cagtggccatggccatggcc 92379
>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence Length = 42022 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 38208 ttcctctccgcctccgcctc 38189
>gb|AF067153.1| Drosophila melanogaster PIP82 protein mRNA, complete cds Length = 4001 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 193 ctcctcctcccacgcctccgaattcctctccgcctc 228 |||||||||| | ||||||||| |||||||||||| Sbjct: 2857 ctcctcctcctcctcctccgaatccctctccgcctc 2822
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 95372 ttcctctccgcctccgcctc 95391
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 4545 ttcctctccgcctccgcctc 4564
>ref|NM_132259.2| Drosophila melanogaster PIP82 CG11219-RA (PIP82), mRNA Length = 3786 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 193 ctcctcctcccacgcctccgaattcctctccgcctc 228 |||||||||| | ||||||||| |||||||||||| Sbjct: 2667 ctcctcctcctcctcctccgaatccctctccgcctc 2632
>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ccctccccttcccccgagcc 269 |||||||||||||||||||| Sbjct: 113358 ccctccccttcccccgagcc 113377
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cctctccgcctccgcctcag 236 |||||||||||||||||||| Sbjct: 24842523 cctctccgcctccgcctcag 24842504
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcttcctcagccgctctcctctc 26 ||||||||||||| |||||||||| Sbjct: 19842319 ctcttcctcagcctctctcctctc 19842296
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttcctctccgcctccgcctc 234 |||||||||||||||||||| Sbjct: 32093932 ttcctctccgcctccgcctc 32093951
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ccctccagcttcacctccta 174 |||||||||||||||||||| Sbjct: 46066 ccctccagcttcacctccta 46047
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 193 ctcctcctcccacgcctccgaattcctctccgcctc 228 |||||||||| | ||||||||| |||||||||||| Sbjct: 116980 ctcctcctcctcctcctccgaatccctctccgcctc 117015
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccccgagccggaacccgaag 280 |||||||||||||||||||| Sbjct: 2233141 ccccgagccggaacccgaag 2233122
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gtctcgccgtcgtcgtcggt 77 |||||||||||||||||||| Sbjct: 4481673 gtctcgccgtcgtcgtcggt 4481692
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcttcctcagccgctctcctctc 26 ||||||||||||| |||||||||| Sbjct: 109364 ctcttcctcagcctctctcctctc 109341
>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176237 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 46688 cagtggccatggccatggcc 46707
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 193 ctcctcctcccacgcctccgaattcctctccgcctc 228 |||||||||| | ||||||||| |||||||||||| Sbjct: 111434 ctcctcctcctcctcctccgaatccctctccgcctc 111469
>emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-417P24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169802 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 25645 cagtggccatggccatggcc 25626
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 1212189 cagtggccatggccatggcc 1212208 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 1096966 cagtggccatggccatggcc 1096985 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 1067593 cagtggccatggccatggcc 1067612
>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence Length = 172721 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tgctgctgattctgattctc 355 |||||||||||||||||||| Sbjct: 106765 tgctgctgattctgattctc 106746
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ccctccagcttcacctccta 174 |||||||||||||||||||| Sbjct: 33636 ccctccagcttcacctccta 33655
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cctctccgcctccgcctcag 236 |||||||||||||||||||| Sbjct: 24770729 cctctccgcctccgcctcag 24770710
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cctctccgcctccgcctcag 236 |||||||||||||||||||| Sbjct: 122345 cctctccgcctccgcctcag 122364
>gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complete sequence Length = 193191 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gacaaacaggaggaggatgc 338 |||||||||||||||||||| Sbjct: 96456 gacaaacaggaggaggatgc 96475
>gb|AC146298.4| Mus musculus BAC clone RP23-214O2 from 6, complete sequence Length = 180505 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccatggccatggccagcctc 129 |||||||||||||||||||| Sbjct: 64241 ccatggccatggccagcctc 64260
>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence Length = 184203 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gacaaacaacaagacaaacaggag 330 |||||||| ||||||||||||||| Sbjct: 90562 gacaaacagcaagacaaacaggag 90585
>emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chromosome 4, complete sequence Length = 160873 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gtccccaaatccagtggcca 112 |||||||||||||||||||| Sbjct: 57408 gtccccaaatccagtggcca 57427
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 agtcctcctcctcccacgcc 208 |||||||||||||||||||| Sbjct: 435052 agtcctcctcctcccacgcc 435071
>gb|M25383.1|HUMIGHHSG4 Human mutant germline Ig H-chain DNA with a deletion of IgG1, IgG2, IgG4 and IgA1, clone pBR0.9cos4 Length = 892 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 agtggccatggccatggcca 124 |||||||||||||||||||| Sbjct: 398 agtggccatggccatggcca 417
>emb|AL901608.1|CNS08CBC Human chromosome 14 DNA sequence Partial sequence from BAC C-2194O15_PCR1 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 38314 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtggccatggccatggcc 123 |||||||||||||||||||| Sbjct: 16897 cagtggccatggccatggcc 16916 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,368,531 Number of Sequences: 3902068 Number of extensions: 4368531 Number of successful extensions: 108544 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107634 Number of HSP's gapped (non-prelim): 910 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)