>ref|XM_476056.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 248 tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 307
           ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 539 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 598

                                        
Query: 308 caggagagggcattgtgacaggcctcaac 336
           |||| ||||||||||| || |||||||||
Sbjct: 599 caggggagggcattgtcaccggcctcaac 627

>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                         
Query: 248   tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 307
             ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 41139 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 41198

                                          
Query: 308   caggagagggcattgtgacaggcctcaac 336
             |||| ||||||||||| || |||||||||
Sbjct: 41199 caggggagggcattgtcaccggcctcaac 41227

>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
              complete sequence
          Length = 136713

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                          
Query: 248    tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 307
              ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 129354 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 129413

                                           
Query: 308    caggagagggcattgtgacaggcctcaac 336
              |||| ||||||||||| || |||||||||
Sbjct: 129414 caggggagggcattgtcaccggcctcaac 129442

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                           
Query: 248     tcctctccggctggtcgccggaggctgatgtctgctcctggcacggtgtttcatgcctga 307
               ||||||||||||||||||||||||| || || ||||| |||||||| ||  | |||||||
Sbjct: 4154660 tcctctccggctggtcgccggaggccgacgtgtgctcatggcacggcgtgacgtgcctga 4154719

                                            
Query: 308     caggagagggcattgtgacaggcctcaac 336
               |||| ||||||||||| || |||||||||
Sbjct: 4154720 caggggagggcattgtcaccggcctcaac 4154748

>gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209653

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 294   tgtttcatgcctgacaggagag 315
             ||||||||||||||||||||||
Sbjct: 32512 tgtttcatgcctgacaggagag 32491

>gb|AC124360.5| Mus musculus BAC clone RP24-502M22 from chromosome 10, complete sequence
          Length = 184346

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 294    tgtttcatgcctgacaggagag 315
              ||||||||||||||||||||||
Sbjct: 170584 tgtttcatgcctgacaggagag 170563

>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a
             novel gene and a novel pseudogene, complete sequence
          Length = 119343

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   tctgctatctttgctctttggc 156
             ||||||||||||||||||||||
Sbjct: 38954 tctgctatctttgctctttggc 38975

>gb|AC124597.5| Mus musculus BAC clone RP23-21K1 from chromosome 6, complete sequence
          Length = 185242

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    aggctgatgtctgctcctgg 288
              ||||||||||||||||||||
Sbjct: 180113 aggctgatgtctgctcctgg 180132

>gb|AF527417.1| Homo sapiens cell division cycle 25A (CDC25A) gene, complete cds
          Length = 31868

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttatacacatcttcccaact 42
             ||||||||||||||||||||
Sbjct: 29473 ttatacacatcttcccaact 29454

>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aggctgatgtctgctcctgg 288
             ||||||||||||||||||||
Sbjct: 42699 aggctgatgtctgctcctgg 42718

>gb|AC128673.4| Homo sapiens BAC clone RP11-1195P3 from UL, complete sequence
          Length = 209514

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    ggcacggtgtttcatgcctg 306
              ||||||||||||||||||||
Sbjct: 101763 ggcacggtgtttcatgcctg 101782

>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5'
              end of the gene for protein phosphatase 2A 48 kDa
              regulatory subunit (PR48), a fatty acid binding protein 5
              (psoriasis-associated) (FABP5) pseudogene, a pseudogene
              similar to part of keratin 18 (KRT18) and nine CpG islands,
              complete sequence
          Length = 218723

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ggcacggtgtttcatgcctg 306
              ||||||||||||||||||||
Sbjct: 121347 ggcacggtgtttcatgcctg 121328

>emb|AL360270.18| Human DNA sequence from clone RP11-96K19 on chromosome 1 Contains a
             putative novel transcript, a gene for a novel protein
             (FLJ11269), a processed pseudogene for cyclin T2 (CCNT2)
             and a CpG island, complete sequence
          Length = 172805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 68034 ggcacggtgtttcatgcctg 68015

>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3
             Contains part of the gene for InaD-like protein (INADL),
             complete sequence
          Length = 143226

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 93268 ggcacggtgtttcatgcctg 93249

>emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chromosome 6, complete
             sequence
          Length = 67372

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 65144 ggcacggtgtttcatgcctg 65125

>gb|BC039099.1| Homo sapiens cDNA clone IMAGE:4824737
          Length = 1264

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 ttctgctatctttgctcttt 153
           ||||||||||||||||||||
Sbjct: 257 ttctgctatctttgctcttt 276

>gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chromosome unknown,
            complete sequence
          Length = 146069

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ggcacggtgtttcatgcctg 306
            ||||||||||||||||||||
Sbjct: 7985 ggcacggtgtttcatgcctg 7966

>gb|AC011773.9| Homo sapiens chromosome 8, clone RP11-219B4, complete sequence
          Length = 160283

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ttctgctatctttgctcttt 153
             ||||||||||||||||||||
Sbjct: 79245 ttctgctatctttgctcttt 79226

>gb|AC074135.3| Homo sapiens chromosome 19 clone CTD-2291D10, complete sequence
          Length = 121050

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 74307 ggcacggtgtttcatgcctg 74326

>gb|AC092290.3| Homo sapiens chromosome 5 clone CTD-2376K3, complete sequence
          Length = 80527

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 62879 ggcacggtgtttcatgcctg 62898

>gb|AC161621.5| Pan troglodytes BAC clone CH251-164P18 from chromosome unknown,
             complete sequence
          Length = 172032

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ggcacggtgtttcatgcctg 306
             ||||||||||||||||||||
Sbjct: 56970 ggcacggtgtttcatgcctg 56989

>gb|AC124916.3| Homo sapiens chromosome 3 clone RP11-1029M24, complete sequence
          Length = 207596

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     ttatacacatcttcccaact 42
              ||||||||||||||||||||
Sbjct: 184346 ttatacacatcttcccaact 184365

>gb|AC104190.3| Homo sapiens chromosome 3 clone RP11-502L5, complete sequence
          Length = 171181

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ttatacacatcttcccaact 42
             ||||||||||||||||||||
Sbjct: 48599 ttatacacatcttcccaact 48618

>dbj|AP006564.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-1157N02_A, complete
             sequence
          Length = 127500

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 283   tcctggcacggtgtttcatgcctg 306
             ||||||||||||| ||||||||||
Sbjct: 74219 tcctggcacggtggttcatgcctg 74242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,340,473
Number of Sequences: 3902068
Number of extensions: 2340473
Number of successful extensions: 40936
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40880
Number of HSP's gapped (non-prelim): 56
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)