>Y1039_PYRHO (O58758) Hypothetical ABC transporter extracellular-binding protein|
           PH1039 precursor
          Length = 420

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 138 RAPRKAGDESHCPPSRWSRRLVVAFGG-ELLRKATKGSRFGENPQVR 275
           +AP  +GD    P S  +   ++ FGG +L  K  KG    E+PQVR
Sbjct: 197 KAPIVSGDSVGWPLSDVTEHFILTFGGKDLQLKLIKGEVKWEDPQVR 243

>TSP4_RAT (P49744) Thrombospondin-4 precursor|
          Length = 980

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -1

Query: 259 SPNLEPFVALRSSSPPKATTRRRDQRLGGQCDSSPAFLGAR 137
           SP     V +   +PP   TRR        CDSSP F G R
Sbjct: 286 SPTPNTLVPIAPPAPPTRPTRR--------CDSSPCFRGVR 318

>PCB_PRODI (Q6Q972) Chlorophyll a/b light-harvesting protein pcb|
          Length = 350

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 171 CPPSRWSRRLVVAFGGELLRKATKG 245
           CPP +W++RL++  G  LL  A  G
Sbjct: 225 CPPFKWAQRLIIYSGEGLLAYALGG 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,111,202
Number of Sequences: 219361
Number of extensions: 626195
Number of successful extensions: 1780
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)