>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 120     tcaagcagcgcttttaaacgcgc 142
               |||||||||||||||||||||||
Sbjct: 2331467 tcaagcagcgcttttaaacgcgc 2331489

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 362     gccgcccctggctgctcgcgccgccg 387
               |||| |||||||||||||||||||||
Sbjct: 3691349 gccggccctggctgctcgcgccgccg 3691324

>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence
          Length = 156084

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    ccctgtcctctttctcccccctccc 42
             ||||||||||| |||||||||||||
Sbjct: 80031 ccctgtcctctctctcccccctccc 80055

>gb|AC175741.5| Mus musculus chromosome 1, clone wi1-1093I15, complete sequence
          Length = 39340

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 18   ccctgtcctctttctcccccctccc 42
            ||||||||||| |||||||||||||
Sbjct: 8960 ccctgtcctctctctcccccctccc 8984

>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 212829

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 58    ctcccgccccatccctcttcttccc 82
             ||||| |||||||||||||||||||
Sbjct: 79561 ctccctccccatccctcttcttccc 79585

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 174     ccgccgagccgctggtcgcgccgcc 198
               |||||||||||||||| ||||||||
Sbjct: 3753281 ccgccgagccgctggtggcgccgcc 3753257

>gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosome 12, complete sequence
          Length = 205080

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tcctctttctcccccctccc 42
              ||||||||||||||||||||
Sbjct: 131160 tcctctttctcccccctccc 131179

>ref|XM_528065.1| PREDICTED: Pan troglodytes similar to Claudin-23 (LOC472693), mRNA
          Length = 2076

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 363 ccgcccctggctgctcgcgccgcc 386
           |||||||||||| |||||||||||
Sbjct: 881 ccgcccctggctcctcgcgccgcc 858

>ref|XM_517160.1| PREDICTED: Pan troglodytes similar to RNA-binding protein
            (LOC461182), mRNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1282 gcgccgccgcccctggctgc 1263

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   aggtgatgcccgcggcggag 292
             ||||||||||||||||||||
Sbjct: 88130 aggtgatgcccgcggcggag 88149

>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tcctctttctcccccctccc 42
             ||||||||||||||||||||
Sbjct: 89884 tcctctttctcccccctccc 89903

>gb|BC071585.1| Homo sapiens RNA-binding protein, mRNA (cDNA clone IMAGE:30342210)
          Length = 4950

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1715 gcgccgccgcccctggctgc 1696

>gb|BC034402.1| Homo sapiens, Similar to RNA-binding protein, clone IMAGE:5167776,
            mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1695 gcgccgccgcccctggctgc 1676

>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence
          Length = 177163

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     ccctgtcctctttctccccc 37
              ||||||||||||||||||||
Sbjct: 129916 ccctgtcctctttctccccc 129935

>gb|AF262323.1| Homo sapiens RNA-binding protein mRNA, complete cds
          Length = 2473

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1229 gcgccgccgcccctggctgc 1210

>gb|AC098869.3| Homo sapiens BAC clone RP11-588L15 from 4, complete sequence
          Length = 188295

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    gcgccgccgcccctggctgc 376
              ||||||||||||||||||||
Sbjct: 120159 gcgccgccgcccctggctgc 120140

>ref|NM_019027.1| Homo sapiens RNA-binding protein (FLJ20273), mRNA
          Length = 4020

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1246 gcgccgccgcccctggctgc 1227

>dbj|AK000280.1| Homo sapiens cDNA FLJ20273 fis, clone HEP01750
          Length = 4020

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gcgccgccgcccctggctgc 376
            ||||||||||||||||||||
Sbjct: 1246 gcgccgccgcccctggctgc 1227

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     cgtggcgccgccgcccctgg 372
               ||||||||||||||||||||
Sbjct: 1077458 cgtggcgccgccgcccctgg 1077477

>emb|AL807755.7| Mouse DNA sequence from clone RP23-394N20 on chromosome X, complete
            sequence
          Length = 203068

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   gtccctgtcctctttctccc 35
            ||||||||||||||||||||
Sbjct: 7781 gtccctgtcctctttctccc 7800


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,612,209
Number of Sequences: 3902068
Number of extensions: 2612209
Number of successful extensions: 56351
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56062
Number of HSP's gapped (non-prelim): 289
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)