>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I|
          Length = 638

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/58 (43%), Positives = 28/58 (48%)
 Frame = +3

Query: 240 YKEALAELTFNCKPIITKLTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPSLYLLD 413
           Y  AL +LTFN KPII  LT IA Q                  + P   KLP+LYLLD
Sbjct: 8   YLSALEDLTFNSKPIIHTLTYIA-QENEPYAISIVNAIEKHIQKCPPNCKLPALYLLD 64

>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +3

Query: 240 YKEALAELTFNCKPIITKLTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPSLYLLD 413
           Y+ +L +LTFN KP I  LTI+A ++                 + P  +KLP +YL+D
Sbjct: 121 YQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTA-KAPSSEKLPVMYLMD 177

>PCF11_YEAST (P39081) Protein PCF11 (protein 1 of CF I)|
          Length = 626

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +3

Query: 228 VVGVYKEALAELTFNCKPIITKLTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPSLYL 407
           +V  +   L ELTFN +PIIT LT +A ++                  +P +QKL + Y 
Sbjct: 8   IVKDFNSILEELTFNSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMP-KQKLYAFYA 66

Query: 408 LD 413
           LD
Sbjct: 67  LD 68

>MASY_GOSHI (P17432) Malate synthase, glyoxysomal (EC 2.3.3.9)|
          Length = 567

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 153 VVGQVVERFRARLREEAGEEPKAAAVVGVYKEALAELTFNC 275
           V G+VVE   AR+  E G+E       G+YKEA    T  C
Sbjct: 501 VFGRVVEEEMARIEREVGKEKFKK---GMYKEACKIFTRQC 538


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,696,498
Number of Sequences: 219361
Number of extensions: 431771
Number of successful extensions: 1229
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)