ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 44 0.34
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
3gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Can... 44 0.34
4gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 42 1.3
5gb|AC098741.2| Mus musculus BAC clone RP23-122J17 from 12, compl... 42 1.3
6gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 42 1.3
7emb|AL512308.19| Human DNA sequence from clone RP11-164H16 on ch... 42 1.3
8gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome ... 40 5.3
9gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, comp... 40 5.3
10gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosom... 40 5.3
11gb|AC110569.8| Mus musculus chromosome 15, clone RP23-309J17, co... 40 5.3
12gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome... 40 5.3
13gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, com... 40 5.3
14gb|BC098685.1| Rattus norvegicus leucine rich repeat containing ... 40 5.3
15ref|XM_802966.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.3
16ref|XM_844947.1| PREDICTED: Canis familiaris similar to Vav-2 pr... 40 5.3
17gb|AC129081.6| Mus musculus BAC clone RP24-274H24 from chromosom... 40 5.3
18gb|AC131675.4| Mus musculus BAC clone RP23-328L1 from chromosome... 40 5.3
19ref|NM_001025653.1| Rattus norvegicus leucine rich repeat contai... 40 5.3
20gb|AY340580.1| Pisum sativum TFL1b (TFL1b) gene, exons 1 and 2 a... 40 5.3
21gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, com... 40 5.3
22gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosom... 40 5.3
23gb|AF175576.1| Picea abies transcription factor viviparous 1 (vp... 40 5.3
24gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc... 40 5.3
25gb|BC031894.1| Mus musculus leucine rich repeat containing 42, m... 40 5.3
26gb|AC055714.11| Homo sapiens 3 BAC RP11-85P9 (Roswell Park Cance... 40 5.3
27dbj|AK169814.1| Mus musculus 2 days neonate thymus thymic cells ... 40 5.3
28dbj|AK157656.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 5.3
29ref|NM_029985.2| Mus musculus leucine rich repeat containing 42 ... 40 5.3
30ref|XM_681489.1| PREDICTED: Danio rerio similar to Rho guanine n... 40 5.3
31gb|BC027203.1| Mus musculus leucine rich repeat containing 42, m... 40 5.3
32gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosom... 40 5.3
33gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome... 40 5.3
34gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, c... 40 5.3
35gb|AC007037.4| Homo sapiens BAC clone RP11-119H15 from 2, comple... 40 5.3
36gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, com... 40 5.3
37emb|BX005304.8| Mouse DNA sequence from clone RP23-328P5 on chro... 40 5.3
38emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, ... 40 5.3
39gb|AY816939.1| Uncultured bacterium clone LE68 small subunit rib... 40 5.3
40emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in l... 40 5.3
41gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, comple... 40 5.3
42gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, compl... 40 5.3
43emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chr... 40 5.3
44emb|AL591865.8| Mouse DNA sequence from clone RP23-14G21 on chro... 40 5.3
45gb|K03196.1|HUMIFNB3 Human interferon-beta-3 gene 40 5.3 
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 374    gtgacagcacagcaccggtaga 395
              ||||||||||||||||||||||
Sbjct: 106565 gtgacagcacagcaccggtaga 106544
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 374      gtgacagcacagcaccggtaga 395
                ||||||||||||||||||||||
Sbjct: 31124484 gtgacagcacagcaccggtaga 31124463
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>gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87243

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 184   cttcttcattcatgataatgctccta 209
             |||||||||||||||||||| |||||
Sbjct: 72308 cttcttcattcatgataatgttccta 72333
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 62    tctctgtcactgtcgctgcctcactgtctgtct 94
             |||||||||||||| ||| ||| ||||||||||
Sbjct: 53073 tctctgtcactgtctctgtctctctgtctgtct 53105
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>gb|AC098741.2| Mus musculus BAC clone RP23-122J17 from 12, complete sequence
          Length = 211681

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 59     ctctctctgtcactgtcgctgcctcactgtctgtctg 95
              ||||||||||| ||||| ||| ||| |||||||||||
Sbjct: 145812 ctctctctgtctctgtctctgtctctctgtctgtctg 145776
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 62    tctctgtcactgtcgctgcctcactgtctgtct 94
             |||||||||||||| ||| ||| ||||||||||
Sbjct: 20692 tctctgtcactgtctctgtctctctgtctgtct 20660
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>emb|AL512308.19| Human DNA sequence from clone RP11-164H16 on chromosome 6, complete
             sequence
          Length = 107455

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 59    ctctctctgtcactgtcgctgcctcactgtctgtctg 95
             ||||||||||| ||||| ||| ||| |||||||||||
Sbjct: 61621 ctctctctgtctctgtctctgtctctctgtctgtctg 61657
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>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence
          Length = 212711

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    agctgagcaggagcagagct 359
              ||||||||||||||||||||
Sbjct: 111119 agctgagcaggagcagagct 111100
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>gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, complete sequence
          Length = 210441

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 60     tctctctgtcactgtcgctgcctcactgtctgtctg 95
              |||||||||| || || ||| |||||||||||||||
Sbjct: 142604 tctctctgtctctctctctgtctcactgtctgtctg 142569
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>gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosome 14, complete
             sequence
          Length = 170642

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 60    tctctctgtcactgtcgctgcctcactgtctgtctg 95
             |||||||||| ||||| ||| ||| |||||||||||
Sbjct: 38137 tctctctgtctctgtctctgtctctctgtctgtctg 38172
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>gb|AC110569.8| Mus musculus chromosome 15, clone RP23-309J17, complete sequence
          Length = 213398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     tgtcgctgcctcactgtctgtctg 95
              ||||||||||||| ||||||||||
Sbjct: 188300 tgtcgctgcctcattgtctgtctg 188277
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>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence
          Length = 162440

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     gctgcctcactgtctgtctg 95
              ||||||||||||||||||||
Sbjct: 101929 gctgcctcactgtctgtctg 101948
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>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence
          Length = 205237

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 59    ctctctctgtcactgtcgctgcctcactgtctgtct 94
             ||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 67232 ctctctctgtctctgtctctgtctctctgtctgtct 67267
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>gb|BC098685.1| Rattus norvegicus leucine rich repeat containing 42, mRNA (cDNA clone
            MGC:112649 IMAGE:7385408), complete cds
          Length = 1696

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagcaggagcagagctcgcc 363
            ||||||||||||||||||||
Sbjct: 1366 gagcaggagcagagctcgcc 1385
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>ref|XM_802966.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504243.30) partial mRNA
          Length = 6435

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  ctcgttcataactgcgtgcc 130
            ||||||||||||||||||||
Sbjct: 5466 ctcgttcataactgcgtgcc 5447
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>ref|XM_844947.1| PREDICTED: Canis familiaris similar to Vav-2 protein (LOC608060),
           mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 agctgagcaggagcagagct 359
           ||||||||||||||||||||
Sbjct: 35  agctgagcaggagcagagct 16
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>gb|AC129081.6| Mus musculus BAC clone RP24-274H24 from chromosome 3, complete sequence
          Length = 179064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 60    tctctctgtcactgtcgctgcctcactgtctgtctg 95
             |||||||||| || || ||| |||||||||||||||
Sbjct: 39940 tctctctgtctctctctctgtctcactgtctgtctg 39905
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>gb|AC131675.4| Mus musculus BAC clone RP23-328L1 from chromosome 18, complete sequence
          Length = 191085

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 198   ataatgctcctactaatccagtca 221
             ||||| ||||||||||||||||||
Sbjct: 49541 ataatactcctactaatccagtca 49564
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>ref|NM_001025653.1| Rattus norvegicus leucine rich repeat containing 42 (Lrrc42), mRNA
          Length = 1696

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagcaggagcagagctcgcc 363
            ||||||||||||||||||||
Sbjct: 1366 gagcaggagcagagctcgcc 1385
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>gb|AY340580.1| Pisum sativum TFL1b (TFL1b) gene, exons 1 and 2 and partial cds
          Length = 1070

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  tcactgtctgtctgcgcttc 101
           ||||||||||||||||||||
Sbjct: 711 tcactgtctgtctgcgcttc 692
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>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence
          Length = 217860

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agtcaagtggatctctccag 236
             ||||||||||||||||||||
Sbjct: 94195 agtcaagtggatctctccag 94214
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>gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosome 14, complete
             sequence
          Length = 170417

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 60    tctctctgtcactgtcgctgcctcactgtctgtctg 95
             |||||||||| ||||| ||| ||| |||||||||||
Sbjct: 34167 tctctctgtctctgtctctgtctctctgtctgtctg 34132
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>gb|AF175576.1| Picea abies transcription factor viviparous 1 (vp1) mRNA, complete
           cds
          Length = 2760

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgagcaggagcagagctcg 361
           ||||||||||||||||||||
Sbjct: 24  ctgagcaggagcagagctcg 5
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>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gctgcctcactgtctgtctg 95
             ||||||||||||||||||||
Sbjct: 80879 gctgcctcactgtctgtctg 80898
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>gb|BC031894.1| Mus musculus leucine rich repeat containing 42, mRNA (cDNA clone
            MGC:38930 IMAGE:5362699), complete cds
          Length = 1706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagcaggagcagagctcgcc 363
            ||||||||||||||||||||
Sbjct: 1357 gagcaggagcagagctcgcc 1376
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>gb|AC055714.11| Homo sapiens 3 BAC RP11-85P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167788

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttccaaagggcagagaagag 48
             ||||||||||||||||||||
Sbjct: 82779 ttccaaagggcagagaagag 82760
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>dbj|AK169814.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430026P15
           product:hypothetical protein, full insert sequence
          Length = 1211

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gagcaggagcagagctcgcc 363
           ||||||||||||||||||||
Sbjct: 911 gagcaggagcagagctcgcc 930
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>dbj|AK157656.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830230B02 product:unclassifiable, full
            insert sequence
          Length = 1913

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agtcaagtggatctctccag 236
            ||||||||||||||||||||
Sbjct: 1721 agtcaagtggatctctccag 1740
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>ref|NM_029985.2| Mus musculus leucine rich repeat containing 42 (Lrrc42), mRNA
          Length = 1756

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagcaggagcagagctcgcc 363
            ||||||||||||||||||||
Sbjct: 1453 gagcaggagcagagctcgcc 1472
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>ref|XM_681489.1| PREDICTED: Danio rerio similar to Rho guanine nucleotide exchange
           factor 6 (PAK-interacting exchange factor alpha)
           (Alpha-Pix) (COOL-2) (LOC558288), mRNA
          Length = 2340

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 tccttcacaagctgctccca 324
           ||||||||||||||||||||
Sbjct: 414 tccttcacaagctgctccca 433
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>gb|BC027203.1| Mus musculus leucine rich repeat containing 42, mRNA (cDNA clone
            MGC:12118 IMAGE:3710091), complete cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gagcaggagcagagctcgcc 363
            ||||||||||||||||||||
Sbjct: 1385 gagcaggagcagagctcgcc 1404
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>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete
             sequence
          Length = 176390

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ccagtcaagtggatctctcc 234
             ||||||||||||||||||||
Sbjct: 76268 ccagtcaagtggatctctcc 76287
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>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence
          Length = 192701

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   agtcaagtggatctctccag 236
             ||||||||||||||||||||
Sbjct: 28827 agtcaagtggatctctccag 28808
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>gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, complete sequence
          Length = 172693

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    tgtcgctgcctcactgtctgtctg 95
             ||||||||||||| ||||||||||
Sbjct: 40459 tgtcgctgcctcattgtctgtctg 40436
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>gb|AC007037.4| Homo sapiens BAC clone RP11-119H15 from 2, complete sequence
          Length = 168084

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttccaaagggcagagaagag 48
             ||||||||||||||||||||
Sbjct: 52797 ttccaaagggcagagaagag 52778
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>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence
          Length = 228068

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 59     ctctctctgtcactgtcgctgcctcactgtctgtct 94
              ||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 173010 ctctctctgtctctgtctctgtctctctgtctgtct 173045
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>emb|BX005304.8| Mouse DNA sequence from clone RP23-328P5 on chromosome 2, complete
            sequence
          Length = 200574

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  gcctgagctgagcaggagca 354
            ||||||||||||||||||||
Sbjct: 8159 gcctgagctgagcaggagca 8140
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>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   tccttcacaagctgctccca 324
             ||||||||||||||||||||
Sbjct: 75191 tccttcacaagctgctccca 75172
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>gb|AY816939.1| Uncultured bacterium clone LE68 small subunit ribosomal RNA gene,
           partial sequence
          Length = 471

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 cctaaatgcttcttcattca 195
           ||||||||||||||||||||
Sbjct: 389 cctaaatgcttcttcattca 370
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>emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in linkage group 4, complete
              sequence
          Length = 250665

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    cactgtgccattacaagaat 157
              ||||||||||||||||||||
Sbjct: 236820 cactgtgccattacaagaat 236839
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>gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, complete sequence
          Length = 158740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    agctgagcaggagcagagct 359
              ||||||||||||||||||||
Sbjct: 151906 agctgagcaggagcagagct 151887
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>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence
          Length = 233864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 59    ctctctctgtcactgtcgctgcctcactgtctgtct 94
             ||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 44129 ctctctctgtctctgtctctgtctctctgtctgtct 44094
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>emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chromosome 4, complete
              sequence
          Length = 220638

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gagcaggagcagagctcgcc 363
              ||||||||||||||||||||
Sbjct: 134671 gagcaggagcagagctcgcc 134652
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>emb|AL591865.8| Mouse DNA sequence from clone RP23-14G21 on chromosome 5, complete
             sequence
          Length = 251952

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 59    ctctctctgtcactgtcgctgcctcactgtct 90
             ||||||||||| ||||| ||||||| ||||||
Sbjct: 82058 ctctctctgtctctgtctctgcctctctgtct 82027
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>gb|K03196.1|HUMIFNB3 Human interferon-beta-3 gene
          Length = 14055

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   ttttccaaagggcagagaag 46
            ||||||||||||||||||||
Sbjct: 4751 ttttccaaagggcagagaag 4770


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,637,376
Number of Sequences: 3902068
Number of extensions: 3637376
Number of successful extensions: 59554
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59464
Number of HSP's gapped (non-prelim): 90
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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