ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OSW2_YEAST (Q12202) Outer spore wall protein 2 29 3.2
2GR98B_DROME (Q9VB26) Putative gustatory receptor 98b 28 4.2
3PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ... 28 5.5
4BIOA_MYCTU (P0A4X6) Adenosylmethionine-8-amino-7-oxononanoate am... 28 5.5
5BIOA_MYCBO (P0A4X7) Adenosylmethionine-8-amino-7-oxononanoate am... 28 5.5

>OSW2_YEAST (Q12202) Outer spore wall protein 2|
          Length = 724

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 3   LLSSRSVVSPPIRLPNDQRERERERD 80
           LL  R   SPP+   N+ +ER+ +RD
Sbjct: 687 LLDKRCAYSPPVLFDNEAKERDHDRD 712



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>GR98B_DROME (Q9VB26) Putative gustatory receptor 98b|
          Length = 403

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -1

Query: 337 SLLLPCPPCHRCIQ--NCWPETLHQ 269
           +LLLPC    RCI   NC+P  LH+
Sbjct: 303 NLLLPCLLSQRCINAYNCFPRILHK 327



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>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 504

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 9   SSRSVVSPPIRLPNDQRERERERDLPPSRAR 101
           SSR       R P  +R+RERERD  P R R
Sbjct: 412 SSRGSKRDRERSPKRERDRERERDRSPRRDR 442



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>BIOA_MYCTU (P0A4X6) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase|
           (EC 2.6.1.62) (7,8-diamino-pelargonic acid
           aminotransferase) (DAPA aminotransferase)
          Length = 437

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 251 GSWSRLLVEGLRPTILDASMTWWT 322
           G+W  L+ +G    +LDA  +WWT
Sbjct: 43  GAWLTLIRDGQPIEVLDAMSSWWT 66



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>BIOA_MYCBO (P0A4X7) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase|
           (EC 2.6.1.62) (7,8-diamino-pelargonic acid
           aminotransferase) (DAPA aminotransferase)
          Length = 437

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 251 GSWSRLLVEGLRPTILDASMTWWT 322
           G+W  L+ +G    +LDA  +WWT
Sbjct: 43  GAWLTLIRDGQPIEVLDAMSSWWT 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.130    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,732,859
Number of Sequences: 219361
Number of extensions: 349681
Number of successful extensions: 1176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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