>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
 Frame = +2

Query: 53  GSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVP---ERASPLHSSDELQHGGV 223
           G GQ  + S    +S     G+ R +SS   V  S YS       +S  HSS   QHG  
Sbjct: 425 GHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSG 484

Query: 224 QGRHSAECNNG-----HNRGDRWSPSMTQTSCSGQN 316
            G  S    +G      +RG+R   S   +S  GQ+
Sbjct: 485 SGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQH 520



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
 Frame = +2

Query: 23   SVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLHSSD 202
            S RSS +   GSG  ++S     +S+   +GY++  S   +  SS Y      S   S  
Sbjct: 913  SGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSG--SGHSSSYEQHGSRSGQSSRS 970

Query: 203  ELQHGGVQGRHSAECNNG-----------HNRGDRWSPSMTQ---TSCSGQNN 319
            E QHG   G  S+   +G           H  G   SPS ++    S SGQ++
Sbjct: 971  E-QHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS 1022



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +2

Query: 53   GSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLHSSDELQHGGVQGR 232
            GSG  R+SS+    S    +  S F    ++ QSS Y+     S  HSS   QHG   G+
Sbjct: 910  GSGSGRSSSSGRHGSGSGQS--SGFGHKSSSGQSSGYTQHGSGSG-HSSSYEQHGSRSGQ 966

Query: 233  HSAECNNGHNRG 268
             S    +G + G
Sbjct: 967  SSRSEQHGSSSG 978

>DDFL1_MOUSE (Q5U464) Development and differentiation enhancing factor-like 1|
          Length = 904

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
 Frame = +2

Query: 5    DFGQVPSVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSS--ETTVQSSKYSVPER 178
            D   +PS+RS   +   +     SS+  L S+  P G S+  SS  E   +S+  S P  
Sbjct: 775  DRSDLPSLRSESPEALENRSSPASSSSSLTSSVEPGGLSQAPSSPEEGLQESASISRPGL 834

Query: 179  ASPLHSSDELQHGGVQGRHSAECNNGHNRGDRW---SPSMTQTSCS 307
            AS   S++      +  + S+E    + RG R    SPS  Q  CS
Sbjct: 835  ASGTTSAEVY----LPVKFSSESTRSYRRGGRSLEDSPSARQPLCS 876

>PACC_CRYNE (Q5KCH0) pH-response transcription factor pacC/RIM101|
          Length = 917

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
 Frame = +2

Query: 56  SGQHRNSSNVDLNSTPSPAGYSRFNSS------ETTVQSSKYSVPERASPL--HSSDELQ 211
           SGQ+R +S++  NST S +G S FNSS       +   + + S P R  P   H+ DE+ 
Sbjct: 726 SGQYRRASSLSSNST-STSGSSSFNSSLAPSNVASGTTTPRGSTPPRGVPTKRHTEDEIV 784

Query: 212 HG 217
            G
Sbjct: 785 RG 786

>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP40]
          Length = 1850

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 25/92 (27%), Positives = 42/92 (45%)
 Frame = +2

Query: 23   SVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLHSSD 202
            S RSS +  + S   ++SS+   +S+ S    S   SS ++  SS  S  + +S   SS 
Sbjct: 1203 SSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSS 1262

Query: 203  ELQHGGVQGRHSAECNNGHNRGDRWSPSMTQT 298
              +       HS   ++GH  G   S S +++
Sbjct: 1263 SSKSSS---HHSHSHHSGHLNGSSSSSSSSRS 1291



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 24/99 (24%), Positives = 43/99 (43%)
 Frame = +2

Query: 23   SVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLHSSD 202
            S RSSK+    S   + SS+   NS+   +  S  +SS +   SS  S    +    SS 
Sbjct: 1169 SSRSSKS----SNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSSSS 1224

Query: 203  ELQHGGVQGRHSAECNNGHNRGDRWSPSMTQTSCSGQNN 319
            +      + R S++ ++  +     S S + +S S  ++
Sbjct: 1225 KSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSS 1263

>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +2

Query: 29   RSSKTKLAGSGQHRNSSNVDL-----NSTPSPAGYSRFNSSETTVQSSKYSVPERASPLH 193
            RSS++  + S   R+S  +DL     +S+ S +  SR +SS ++  SS  S    +S   
Sbjct: 1096 RSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSRRS 1155

Query: 194  SSDELQHGGVQGRHSAECNNGHNRGDRWSPSMTQTS 301
            SS          R S   N+      R S S ++TS
Sbjct: 1156 SSSSSSSSSSSSRSSRRVNS-----TRSSSSSSRTS 1186

>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)|
          Length = 943

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 128 NSSETTVQSSKYSVPERASPLHSSDELQHGGVQGRHSAECNNGHNRGDRWSPSMTQTSCS 307
           +SS + + +S  S    AS   SS  LQ    Q +++   NN +N  +  + + T T+ +
Sbjct: 377 SSSSSYLSTSPLSTSSLASSYQSSQSLQFNQNQNQNNNNNNNNNNNNNIQTTTTTTTNNN 436

Query: 308 GQNN 319
             NN
Sbjct: 437 NNNN 440

>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring|
           protein 9) (PRKA9) (A-kinase anchor protein 450 kDa)
           (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350)
           (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein)
           (Yotiao protei
          Length = 3911

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +2

Query: 11  GQVPSVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPL 190
           GQ PS +  K +   S +H  S++ DLN   S       NSS+  V+S+          L
Sbjct: 41  GQSPSKKQKKKRKTSSSKHDVSAHHDLNIDQSQCNEMYINSSQ-RVESTVIPESTIMRTL 99

Query: 191 HSSDELQH 214
           HS +   H
Sbjct: 100 HSGEITSH 107

>IL1B_TRIVU (Q9XS77) Interleukin-1 beta precursor (IL-1 beta)|
          Length = 269

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 401 NPLQNLLVNYFXVEPVTVRHADYYE 327
           N L N+  N F  EP+T ++ D YE
Sbjct: 91  NDLMNIFTNIFQEEPITFKNCDIYE 115

>YFEU_SALTY (Q8ZN25) Protein yfeU|
          Length = 297

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +2

Query: 68  RNSSNVDLNSTPSPAGYSRFNSSETTV-QSSKYSVPERASPLH-SSDELQHGG 220
           RN   +DL++ P+P    RFN  +T V ++ K ++P+ A  +  ++  L+ GG
Sbjct: 11  RNPQTMDLDALPTPELVKRFNEQDTLVAEAVKATLPDVARAVDAAAAALKSGG 63

>TIF1B_HUMAN (Q13263) Transcription intermediary factor 1-beta (TIF1-beta)|
           (Tripartite motif protein 28) (Nuclear corepressor
           KAP-1) (KRAB-associated protein 1) (KAP-1)
           (KRAB-interacting protein 1) (KRIP-1) (RING finger
           protein 96)
          Length = 835

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -2

Query: 273 RSPRLWPLLHSA--ECL-PCTPPCCNSSEECSGLALSGT 166
           R PRL P LHSA   CL P  P   NSS +  G A  GT
Sbjct: 76  REPRLLPCLHSACSACLGPAAPAAANSSGD-GGAAGDGT 113

>TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (TIF1-beta)|
           (Tripartite motif protein 28) (KRAB-A-interacting
           protein) (KRIP-1)
          Length = 834

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -2

Query: 273 RSPRLWPLLHSA--ECL-PCTPPCCNSS 199
           R PRL P LHSA   CL P TP   N+S
Sbjct: 77  RDPRLLPCLHSACSACLGPATPAAANNS 104

>GAT19_ARATH (Q8LC79) GATA transcription factor 19|
          Length = 295

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 12/83 (14%)
 Frame = +2

Query: 68  RNSSNVDLNSTP----SPAGYS--------RFNSSETTVQSSKYSVPERASPLHSSDELQ 211
           R  +N D  STP     P G          RF   E    ++  +    A+P+ +     
Sbjct: 152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGH 211

Query: 212 HGGVQGRHSAECNNGHNRGDRWS 280
           H      + A  NN +N G  W+
Sbjct: 212 HNSGYNNYHAATNNNNNNGTPWA 234

>UME6_YEAST (P39001) Transcriptional regulator UME6 (Negative transcriptional|
           regulator of IME2)
          Length = 836

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 21/85 (24%), Positives = 35/85 (41%)
 Frame = +2

Query: 14  QVPSVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLH 193
           Q P+V S  T  AGSG    S       +  P   +  N +     +S  S+  R +  +
Sbjct: 223 QAPAVSSPGTTAAGSGAGTGSGIRSRTGSDLPLIITSANKNNGKTTNSPMSILSRNNSTN 282

Query: 194 SSDELQHGGVQGRHSAECNNGHNRG 268
           ++D   +  +Q   S E +N +  G
Sbjct: 283 NND---NNSIQSSDSRESSNNNEIG 304

>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development|
           regulatory protein 1)
          Length = 1004

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +2

Query: 14  QVPSVRSSKTKLAGSGQHRNSSNVDLNSTPSPAGYSRFNSSETTVQSSKYSVPERASPLH 193
           +  S  + K +  GSGQ     N+   +TP+P+      SS T  Q   +S+ ++   +H
Sbjct: 330 EAESAAAKKAEADGSGQQNVGMNLTRTATPAPS--QTLISSATYTQIQPHSLIQQQQQIH 387


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,408,119
Number of Sequences: 219361
Number of extensions: 1164002
Number of successful extensions: 3589
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3582
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)