ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 9e-05
3emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 56 9e-05
4ref|XM_608162.2| PREDICTED: Bos taurus similar to Homeobox prote... 46 0.090
5gb|AY012605.1| Drosophila kanekoi no on or off transient A (nonA... 44 0.36
6ref|XM_483580.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
7ref|XM_324150.1| Neurospora crassa OR74A predicted protein (NCU0... 42 1.4
8ref|XM_955327.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
9emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete ch... 42 1.4
10emb|AL360004.22| Human DNA sequence from clone RP11-88G17 on chr... 42 1.4
11emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 42 1.4
12emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 42 1.4
13gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, compl... 42 1.4
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
15gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.4
16dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AK108062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
19gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202... 42 1.4
20gb|AC005335.1|AC005335 Homo sapiens chromosome 19, cosmid R34296... 42 1.4
21ref|XM_483376.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
22gb|DQ115388.1| Salmonella enterica subsp. enterica serovar Dubli... 40 5.6
23ref|NM_001012672.1| Bos taurus uroplakin IIIB (UPK3B), mRNA 40 5.6
24gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 40 5.6
25gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.6
26gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
27gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
28gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
29gb|AC133451.14| Mus musculus chromosome 19, clone RP24-91H12, co... 40 5.6
30gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI ... 40 5.6
31ref|XM_842899.1| Leishmania major strain Friedlin serine peptida... 40 5.6
32gb|AC026470.6| Homo sapiens chromosome 16 clone RP11-44I10, comp... 40 5.6
33gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete se... 40 5.6
34gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete s... 40 5.6
35gb|AC146705.11| Medicago truncatula clone mth2-101f3, complete s... 40 5.6
36emb|Z35146.1|BFHOX6G B.floridae Hox-6 gene for homeobox protein ... 40 5.6
37gb|BC070062.1| Homo sapiens Ras and Rab interactor 3, mRNA (cDNA... 40 5.6
38gb|AC023813.6| Homo sapiens chromosome 16 clone CTC-527H23, comp... 40 5.6
39gb|DQ270991.1| Mustela vison clone IX5J4 microsatellite sequence 40 5.6
40gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell ... 40 5.6
41gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell... 40 5.6
42ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA 40 5.6
43ref|NM_079093.2| Drosophila melanogaster Fibrillarin CG9888-RA (... 40 5.6
44gb|AY233461.1| Bos taurus uroplakin IIIb mRNA, complete cds 40 5.6
45gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2)... 40 5.6
46gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, r... 40 5.6
47dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
50gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete seq... 40 5.6
51dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
52dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
53dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
54dbj|AK121158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
55gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67... 40 5.6
56gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 ... 40 5.6
57gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, c... 40 5.6
58gb|BT001738.1| Drosophila melanogaster RE72617 full insert cDNA 40 5.6
59gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
60emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 40 5.6
61dbj|AP004934.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.6
62gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product m... 40 5.6
63emb|X05285.1|DMGCR6 D.melanogaster GC-rich dispersed repeat GCR6... 40 5.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||||||||||| ||||||
Sbjct: 3338062 cctttggccagccatccgctccggcgtttggc 3338093



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||||||||||| ||||||
Sbjct: 3338014 cctttggccagccatccgctccggcgtttggc 3338045



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 167     agcccttttgggcagacgtcaaccaaccccttcggg 202
               ||||||||||||||||| |||| |||||| ||||||
Sbjct: 3337797 agcccttttgggcagacctcaagcaacccattcggg 3337832



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 377     gcctttggccagcagtccaccccggcctttggcgc 411
               |||||||||||||  ||||||||||| ||||||||
Sbjct: 3346667 gcctttggccagccatccaccccggcgtttggcgc 3346701



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 330     cctttggccagccatccgctccggcctttggcgc 363
               ||||||||||||||||| | ||||| ||||||||
Sbjct: 3346668 cctttggccagccatccaccccggcgtttggcgc 3346701



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 216     ttggccagcccagcaccaccaacaacaatcccttcgcacccaaacccttcggcagcccga 275
               |||||||| |||||||| ||| |  |||||| ||||| || ||||| || ||||||||||
Sbjct: 3346503 ttggccaggccagcacctccacctccaatccgttcgcgccgaaaccatttggcagcccga 3346562

                 
Query: 276     cc 277
               ||
Sbjct: 3346563 cc 3346564



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               |||| |||||||||||| ||||||| ||||||
Sbjct: 3346716 ccttcggccagccatccactccggcgtttggc 3346747



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||| ||| ||| ||||||
Sbjct: 3338110 cctttggccagccatccactcaggcgtttggc 3338141



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               |||||||||||||||| |||||| | ||||||
Sbjct: 3337966 cctttggccagccatctgctccgacgtttggc 3337997
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||||||||||| ||||||
Sbjct: 3338007 cctttggccagccatccgctccggcgtttggc 3338038



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||||||||||| ||||||
Sbjct: 3337959 cctttggccagccatccgctccggcgtttggc 3337990



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 167     agcccttttgggcagacgtcaaccaaccccttcggg 202
               ||||||||||||||||| |||| |||||| ||||||
Sbjct: 3337742 agcccttttgggcagacctcaagcaacccattcggg 3337777



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 377     gcctttggccagcagtccaccccggcctttggcgc 411
               |||||||||||||  ||||||||||| ||||||||
Sbjct: 3346612 gcctttggccagccatccaccccggcgtttggcgc 3346646



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 330     cctttggccagccatccgctccggcctttggcgc 363
               ||||||||||||||||| | ||||| ||||||||
Sbjct: 3346613 cctttggccagccatccaccccggcgtttggcgc 3346646



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 216     ttggccagcccagcaccaccaacaacaatcccttcgcacccaaacccttcggcagcccga 275
               |||||||| |||||||| ||| |  |||||| ||||| || ||||| || ||||||||||
Sbjct: 3346448 ttggccaggccagcacctccacctccaatccgttcgcgccgaaaccatttggcagcccga 3346507

                 
Query: 276     cc 277
               ||
Sbjct: 3346508 cc 3346509



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               |||| |||||||||||| ||||||| ||||||
Sbjct: 3346661 ccttcggccagccatccactccggcgtttggc 3346692



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               ||||||||||||||||| ||| ||| ||||||
Sbjct: 3338055 cctttggccagccatccactcaggcgtttggc 3338086



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 330     cctttggccagccatccgctccggcctttggc 361
               |||||||||||||||| |||||| | ||||||
Sbjct: 3337911 cctttggccagccatctgctccgacgtttggc 3337942
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 330   cctttggccagccatccgctccggcctttggc 361
             ||||||||||||||||||||||||| ||||||
Sbjct: 17115 cctttggccagccatccgctccggcgtttggc 17146



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 330   cctttggccagccatccgctccggcctttggc 361
             ||||||||||||||||||||||||| ||||||
Sbjct: 17067 cctttggccagccatccgctccggcgtttggc 17098



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 167   agcccttttgggcagacgtcaaccaaccccttcggg 202
             ||||||||||||||||| |||| |||||| ||||||
Sbjct: 16850 agcccttttgggcagacctcaagcaacccattcggg 16885



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 377   gcctttggccagcagtccaccccggcctttggcgc 411
             |||||||||||||  ||||||||||| ||||||||
Sbjct: 25720 gcctttggccagccatccaccccggcgtttggcgc 25754



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 330   cctttggccagccatccgctccggcctttggcgc 363
             ||||||||||||||||| | ||||| ||||||||
Sbjct: 25721 cctttggccagccatccaccccggcgtttggcgc 25754



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 216   ttggccagcccagcaccaccaacaacaatcccttcgcacccaaacccttcggcagcccga 275
             |||||||| |||||||| ||| |  |||||| ||||| || ||||| || ||||||||||
Sbjct: 25556 ttggccaggccagcacctccacctccaatccgttcgcgccgaaaccatttggcagcccga 25615

               
Query: 276   cc 277
             ||
Sbjct: 25616 cc 25617



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 330   cctttggccagccatccgctccggcctttggc 361
             |||| |||||||||||| ||||||| ||||||
Sbjct: 25769 ccttcggccagccatccactccggcgtttggc 25800



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 330   cctttggccagccatccgctccggcctttggc 361
             ||||||||||||||||| ||| ||| ||||||
Sbjct: 17163 cctttggccagccatccactcaggcgtttggc 17194



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 330   cctttggccagccatccgctccggcctttggc 361
             |||||||||||||||| |||||| | ||||||
Sbjct: 17019 cctttggccagccatctgctccgacgtttggc 17050
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>ref|XM_608162.2| PREDICTED: Bos taurus similar to Homeobox protein engrailed-1
           (Hu-En-1) (LOC529707), mRNA
          Length = 966

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 87  cctcctccgtccgccgcagccgccaccacca 117
           ||||||||| |||||||||||||| ||||||
Sbjct: 305 cctcctccggccgccgcagccgccgccacca 275
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>gb|AY012605.1| Drosophila kanekoi no on or off transient A (nonA) gene, exon 2 and
           partial cds
          Length = 478

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 95  gtccgccgcagccgccaccacc 116
           ||||||||||||||||||||||
Sbjct: 319 gtccgccgcagccgccaccacc 298
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>ref|XM_483580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 85  ctcctcctccgtccgccgcagccgccacc 113
           ||||||||||| ||||||| |||||||||
Sbjct: 947 ctcctcctccgaccgccgccgccgccacc 975
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>ref|XM_324150.1| Neurospora crassa OR74A predicted protein (NCU04794.1) partial mRNA
          Length = 1113

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 93  ccgtccgccgcagccgccaccacca 117
           ||||||||||| |||||||||||||
Sbjct: 328 ccgtccgccgccgccgccaccacca 352
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>ref|XM_955327.1| Neurospora crassa OR74A hypothetical protein (NCU04794.1) partial
           mRNA
          Length = 1113

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 93  ccgtccgccgcagccgccaccacca 117
           ||||||||||| |||||||||||||
Sbjct: 328 ccgtccgccgccgccgccaccacca 352
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>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     ccgccgcagccgccaccacca 117
              |||||||||||||||||||||
Sbjct: 282300 ccgccgcagccgccaccacca 282320
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>emb|AL360004.22| Human DNA sequence from clone RP11-88G17 on chromosome 9 Contains the
             3' end of a novel gene, the 3' end of the GPR107 gene for
             G protein-coupled receptor 107 (LUSTR1), the FREQ gene for
             frequenin homolog (Drosophila) (neuronal calcium sensor
             1), the 5' end of a novel pseudogene and two CpG islands,
             complete sequence
          Length = 182211

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   agggccttggccagcccagca 230
             |||||||||||||||||||||
Sbjct: 66681 agggccttggccagcccagca 66661
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     ccgccgcagccgccaccacca 117
              |||||||||||||||||||||
Sbjct: 285878 ccgccgcagccgccaccacca 285898
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    ccgccgcagccgccaccacca 117
             |||||||||||||||||||||
Sbjct: 16130 ccgccgcagccgccaccacca 16110
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>gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, complete sequence
          Length = 115289

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     ccgccgcagccgccaccacca 117
              |||||||||||||||||||||
Sbjct: 111959 ccgccgcagccgccaccacca 111979
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 85       ctcctcctccgtccgccgcagccgccacc 113
                ||||||||||| ||||||| |||||||||
Sbjct: 27070646 ctcctcctccgaccgccgccgccgccacc 27070618



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 97      ccgccgcagccgccaccaccatcaa 121
               ||||||| |||||||||||||||||
Sbjct: 2424751 ccgccgccgccgccaccaccatcaa 2424775



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 97       ccgccgcagccgccaccacc 116
                ||||||||||||||||||||
Sbjct: 25925567 ccgccgcagccgccaccacc 25925548
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    gccgccaccaccatcaaccag 125
              |||||||||||||||||||||
Sbjct: 480702 gccgccaccaccatcaaccag 480722
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>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0025F03
          Length = 138042

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 97     ccgccgcagccgccaccaccatcaa 121
              ||||||| |||||||||||||||||
Sbjct: 100721 ccgccgccgccgccaccaccatcaa 100745
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 85    ctcctcctccgtccgccgcagccgccacc 113
             ||||||||||| ||||||| |||||||||
Sbjct: 41733 ctcctcctccgaccgccgccgccgccacc 41705
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>dbj|AK108062.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B03, full
           insert sequence
          Length = 1833

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 97  ccgccgcagccgccaccaccatcaa 121
           ||||||| |||||||||||||||||
Sbjct: 53  ccgccgccgccgccaccaccatcaa 29
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>gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202_H_3, complete sequence
          Length = 187174

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    agggccttggccagcccagca 230
              |||||||||||||||||||||
Sbjct: 178457 agggccttggccagcccagca 178437
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>gb|AC005335.1|AC005335 Homo sapiens chromosome 19, cosmid R34296, complete sequence
          Length = 47003

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    ccgccgcagccgccaccacca 117
             |||||||||||||||||||||
Sbjct: 39369 ccgccgcagccgccaccacca 39349
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>ref|XM_483376.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ccgccgcagccgccaccacc 116
            ||||||||||||||||||||
Sbjct: 1064 ccgccgcagccgccaccacc 1083
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>gb|DQ115388.1| Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115,
             complete sequence
          Length = 74589

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 70    caggtgacccaccatctcctcctccgtccgccgcagccgc 109
             ||||| || ||||||||||| ||||||| || ||||||||
Sbjct: 28545 caggtcacgcaccatctcctgctccgtctgctgcagccgc 28506
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>ref|NM_001012672.1| Bos taurus uroplakin IIIB (UPK3B), mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 ggccagcccagcaccaccaa 237
           ||||||||||||||||||||
Sbjct: 210 ggccagcccagcaccaccaa 191
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gaaggagaagcaacccccac 38
             ||||||||||||||||||||
Sbjct: 96261 gaaggagaagcaacccccac 96242
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    ggcgcctttggccagcagtc 393
              ||||||||||||||||||||
Sbjct: 105007 ggcgcctttggccagcagtc 105026
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>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    cgccgcagccgccaccacca 117
             ||||||||||||||||||||
Sbjct: 30078 cgccgcagccgccaccacca 30097
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
              complete sequence
          Length = 176678

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     cctcctccgtccgccgcagc 106
              ||||||||||||||||||||
Sbjct: 116685 cctcctccgtccgccgcagc 116666
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>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     cgccgcagccgccaccacca 117
              ||||||||||||||||||||
Sbjct: 158537 cgccgcagccgccaccacca 158556
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>gb|AC133451.14| Mus musculus chromosome 19, clone RP24-91H12, complete sequence
          Length = 184265

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     cgccgcagccgccaccacca 117
              ||||||||||||||||||||
Sbjct: 131532 cgccgcagccgccaccacca 131513
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>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila
              melanogaster library) complete sequence
          Length = 166613

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     ccgccgcagccgccaccacc 116
              ||||||||||||||||||||
Sbjct: 160698 ccgccgcagccgccaccacc 160679
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>ref|XM_842899.1| Leishmania major strain Friedlin serine peptidase, clan SP, family
            S59 (LMJ_0294) partial mRNA
          Length = 4671

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  ggcgcctttggccagcagtc 393
            ||||||||||||||||||||
Sbjct: 1384 ggcgcctttggccagcagtc 1403
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>gb|AC026470.6| Homo sapiens chromosome 16 clone RP11-44I10, complete sequence
          Length = 169566

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   caccaccatcaaccagccatgttc 133
             ||||||||||||||||||| ||||
Sbjct: 30627 caccaccatcaaccagccaggttc 30650
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>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
          Length = 129053

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 94    cgtccgccgcagccgccaccacca 117
             |||||||| |||||||||||||||
Sbjct: 45754 cgtccgcctcagccgccaccacca 45731
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>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence
          Length = 117666

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 94     cgtccgccgcagccgccaccacca 117
              |||||||| |||||||||||||||
Sbjct: 105902 cgtccgcctcagccgccaccacca 105925
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>gb|AC146705.11| Medicago truncatula clone mth2-101f3, complete sequence
          Length = 120058

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   cccagcaccaccaacaacaa 243
             ||||||||||||||||||||
Sbjct: 10197 cccagcaccaccaacaacaa 10216
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>emb|Z35146.1|BFHOX6G B.floridae Hox-6 gene for homeobox protein (partial)
          Length = 681

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 cgccaccaccatcaaccagc 126
           ||||||||||||||||||||
Sbjct: 597 cgccaccaccatcaaccagc 616
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>gb|BC070062.1| Homo sapiens Ras and Rab interactor 3, mRNA (cDNA clone MGC:87258
            IMAGE:30332851), complete cds
          Length = 3617

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   ccgccgcagccgccaccacc 116
            ||||||||||||||||||||
Sbjct: 2824 ccgccgcagccgccaccacc 2805
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>gb|AC023813.6| Homo sapiens chromosome 16 clone CTC-527H23, complete sequence
          Length = 127725

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   caccaccatcaaccagccatgttc 133
             ||||||||||||||||||| ||||
Sbjct: 83442 caccaccatcaaccagccaggttc 83465
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>gb|DQ270991.1| Mustela vison clone IX5J4 microsatellite sequence
          Length = 467

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  ctcctcctccgtccgccgca 104
           ||||||||||||||||||||
Sbjct: 457 ctcctcctccgtccgccgca 438
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>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179363

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ccgccgcagccgccaccacc 116
             ||||||||||||||||||||
Sbjct: 23955 ccgccgcagccgccaccacc 23936
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>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     ccgccgcagccgccaccacc 116
              ||||||||||||||||||||
Sbjct: 122002 ccgccgcagccgccaccacc 121983
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>ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA
          Length = 6497

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   ccgccgcagccgccaccacc 116
            ||||||||||||||||||||
Sbjct: 3286 ccgccgcagccgccaccacc 3267
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>ref|NM_079093.2| Drosophila melanogaster Fibrillarin CG9888-RA (Fib), mRNA
          Length = 1331

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 85  ctcctcctccgtccgccgcagccgccaccacc 116
           |||||||||| |||||||| ||||||||||||
Sbjct: 184 ctcctcctcc-tccgccgccgccgccaccacc 154
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>gb|AY233461.1| Bos taurus uroplakin IIIb mRNA, complete cds
          Length = 2328

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 ggccagcccagcaccaccaa 237
           ||||||||||||||||||||
Sbjct: 210 ggccagcccagcaccaccaa 191
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>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds
          Length = 68460

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  cccagcaccaccaacaacaa 243
            ||||||||||||||||||||
Sbjct: 2764 cccagcaccaccaacaacaa 2745
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>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone
              BACR08P09, complete sequence
          Length = 181463

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 85     ctcctcctccgtccgccgcagccgccaccacc 116
              |||||||||| |||||||| ||||||||||||
Sbjct: 112706 ctcctcctcc-tccgccgccgccgccaccacc 112736
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 98       cgccgcagccgccaccacca 117
                ||||||||||||||||||||
Sbjct: 17868886 cgccgcagccgccaccacca 17868905



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tctcctcctccgtccgccgc 103
              ||||||||||||||||||||
Sbjct: 634456 tctcctcctccgtccgccgc 634475
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     cctcctccgtccgccgcagc 106
              ||||||||||||||||||||
Sbjct: 599286 cctcctccgtccgccgcagc 599267
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 96      tccgccgcagccgccaccaccatc 119
               |||||||| |||||||||||||||
Sbjct: 6222091 tccgccgccgccgccaccaccatc 6222114
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>gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete sequence
          Length = 133980

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    cgccaccaccatcaaccagc 126
              ||||||||||||||||||||
Sbjct: 114858 cgccaccaccatcaaccagc 114839
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>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    tccgccgcagccgccaccaccatc 119
             |||||||| |||||||||||||||
Sbjct: 19478 tccgccgccgccgccaccaccatc 19501
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>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1003_A09
          Length = 150755

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     ccgccgcagccgccaccacc 116
              ||||||||||||||||||||
Sbjct: 111354 ccgccgcagccgccaccacc 111335
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>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1081_B12
          Length = 124741

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ccgccgcagccgccaccacc 116
             ||||||||||||||||||||
Sbjct: 10444 ccgccgcagccgccaccacc 10425
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>dbj|AK121158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L12, full
            insert sequence
          Length = 2595

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ccgccgcagccgccaccacc 116
            ||||||||||||||||||||
Sbjct: 1225 ccgccgcagccgccaccacc 1244
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>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete
              sequence
          Length = 283700

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 85     ctcctcctccgtccgccgcagccgccaccacc 116
              |||||||||| |||||||| ||||||||||||
Sbjct: 178519 ctcctcctcc-tccgccgccgccgccaccacc 178549
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>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete
              sequence
          Length = 285729

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ccgccgcagccgccaccacc 116
              ||||||||||||||||||||
Sbjct: 120744 ccgccgcagccgccaccacc 120763
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>gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, complete sequence
          Length = 154959

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     cgccgcagccgccaccacca 117
              ||||||||||||||||||||
Sbjct: 146209 cgccgcagccgccaccacca 146228
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>gb|BT001738.1| Drosophila melanogaster RE72617 full insert cDNA
          Length = 1235

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 85  ctcctcctccgtccgccgcagccgccaccacc 116
           |||||||||| |||||||| ||||||||||||
Sbjct: 184 ctcctcctcc-tccgccgccgccgccaccacc 154
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 98       cgccgcagccgccaccacca 117
                ||||||||||||||||||||
Sbjct: 17963203 cgccgcagccgccaccacca 17963222



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tctcctcctccgtccgccgc 103
              ||||||||||||||||||||
Sbjct: 634456 tctcctcctccgtccgccgc 634475
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     tctcctcctccgtccgccgc 103
              ||||||||||||||||||||
Sbjct: 108516 tctcctcctccgtccgccgc 108497
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>dbj|AP004934.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02L13, TM0095a,
             complete sequence
          Length = 16590

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ccaccaccatcaaccagcca 128
             ||||||||||||||||||||
Sbjct: 15965 ccaccaccatcaaccagcca 15984
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>gb|U18650.1|RNU18650 Rattus norvegicus Huntington gene product mRNA, complete cds
          Length = 9929

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  ccgccgcagccgccaccacc 116
           ||||||||||||||||||||
Sbjct: 99  ccgccgcagccgccaccacc 118
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>emb|X05285.1|DMGCR6 D.melanogaster GC-rich dispersed repeat GCR6 (Fibrillarin gene
           fragment)
          Length = 441

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 85  ctcctcctccgtccgccgcagccgccaccacc 116
           |||||||||| |||||||| ||||||||||||
Sbjct: 79  ctcctcctcc-tccgccgccgccgccaccacc 49


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,055,721
Number of Sequences: 3902068
Number of extensions: 3055721
Number of successful extensions: 75487
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 74871
Number of HSP's gapped (non-prelim): 621
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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