ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl17e03 |
|---|---|
| Clone Library Name | barley_pub |
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 33.9 bits (76), Expect = 0.11 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Frame = -1 Query: 287 GEAAERPVMRQNMVAAAVDLG------FPAPGGASPRPNPRESGRRRPDWATGEGGWIGR 126 G+ A RP AA G P+PG PRPNP +R P GG GR Sbjct: 217 GQGAPRPGATPGPRPAAAQGGPRPGGPRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGR 276 Query: 125 --GASGSNWDRGG 93 GA G+ GG Sbjct: 277 PGGAPGAGRPGGG 289
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 33.9 bits (76), Expect = 0.11 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Frame = -1 Query: 302 RTVSTGEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRG 123 R G+ RP AA PAPGG+ P + R D G G +G Sbjct: 292 RPAGAGDRGPRPAPA---AAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRGLKTKG 348 Query: 122 A-SGSNWDRGG*EAHERRKKQHAF 54 +G++W G + ++ QHAF Sbjct: 349 GDAGNDWKSRGGKGRNKQNNQHAF 372
>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis| thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 Score = 33.5 bits (75), Expect = 0.14 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = -1 Query: 227 GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDRGG*EAHERRKKQHAFLF 48 G P+PGG S P G P G GG +G G + G E+ A Sbjct: 404 GSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGG---KSGKSGEEKSSSNLALPL 460 Query: 47 GLSL-GLIWFGDGG 9 G+SL L+ G GG Sbjct: 461 GISLPTLLSLGAGG 474
>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional| corepressor Sin3b) (Histone deacetylase complex subunit Sin3b) Length = 1162 Score = 32.0 bits (71), Expect = 0.41 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 152 TGEGGWIGRGASGSNWDRGG*EAHER 75 +G GG GRG SG+ W R G HE+ Sbjct: 11 SGAGGPAGRGLSGARWGRSGSAGHEK 36
>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)| Length = 335 Score = 31.6 bits (70), Expect = 0.53 Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 18/69 (26%) Frame = -1 Query: 221 PAPGGASPRP----------NPRESGRRRPDWATGEGGW------IGRGASGSN-WDRG- 96 PAP G SP P NP S P W+ W G SG+ WD G Sbjct: 105 PAPPGTSPSPFVGFEGATGQNPATSAGGVPSWSHPPAAWSTTSWDCSVGPSGATYWDNGL 164 Query: 95 G*EAHERRK 69 G EAHE K Sbjct: 165 GGEAHEDYK 173
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4| Length = 376 Score = 31.2 bits (69), Expect = 0.70 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -1 Query: 287 GEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESG 174 G +A P N ++ + G PAPG ++ PNP +G Sbjct: 31 GSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAG 68
>SIN3B_MOUSE (Q62141) Paired amphipathic helix protein Sin3b (Transcriptional| corepressor Sin3b) (Histone deacetylase complex subunit Sin3b) Length = 1098 Score = 31.2 bits (69), Expect = 0.70 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 Query: 149 GEGGWIGRGASGSNWDRGG*EAHER 75 G GG GRG GS W R G HE+ Sbjct: 5 GSGGSAGRGFGGSRWGRSGSGGHEK 29
>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)| (Proline-rich synapse-associated protein 2) (ProSAP2) (Fragment) Length = 797 Score = 31.2 bits (69), Expect = 0.70 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%) Frame = -1 Query: 293 STGEAAERPVMRQNMVA-----AAVDLGFPAPGGAS--PRPNPRESGRRRP--DWATGEG 141 S + + P+++Q V AA+ +G P PGG S P+P G R D+ G+G Sbjct: 11 SKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGAGDG 70 Query: 140 GWIGRGASGSNWDRGG*EAHERRKKQHAFL 51 + G G DR E R++ FL Sbjct: 71 PGLAFGGPGPAKDR----RLEERRRSTVFL 96
>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)| Length = 315 Score = 31.2 bits (69), Expect = 0.70 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = -1 Query: 266 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 90 +++Q A D G P PG P P E G R P W G I R + W + Sbjct: 1 MVQQRGARAKRDGGPPPPG-----PGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52 Query: 89 EAHERRK 69 HERRK Sbjct: 53 --HERRK 57
>SCRT1_MOUSE (Q99M85) Transcriptional repressor scratch 1 (Scratch homolog 1| zinc finger protein) (Scratch 1) (SCRT) (mScrt) Length = 348 Score = 30.8 bits (68), Expect = 0.91 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 251 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 111 M AAAV +LG PA G++P P P RP+ AT GG+I A+ S Sbjct: 68 MYAAAVRGELG-PAASGSAPPPTP------RPELATAAGGYINGDAAVS 109
>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1| zinc finger protein) (Scratch 1) (SCRT) (hScrt) Length = 348 Score = 30.8 bits (68), Expect = 0.91 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 251 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 111 M AAAV +LG PA G++P P P RP+ AT GG+I A+ S Sbjct: 68 MYAAAVRGELG-PAAAGSAPPPTP------RPELATAAGGYINGDAAVS 109
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 30.8 bits (68), Expect = 0.91 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 196 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288 RG A PGAG R+ AA + W L A+P Sbjct: 34 RGPAAPGAGGARAALAAALLWATWALLLAAP 64
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 30.8 bits (68), Expect = 0.91 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 196 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288 RG A PGAG R+ AA + W L A+P Sbjct: 34 RGPAAPGAGGARAALAAALLWATWALLLAAP 64
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = -1 Query: 227 GFPAPGGASPRPNPRESGR-------RRPDWATGEGGWIGRGASGSNWDRGG*EAHERR 72 G PGG P + R+SGR RPD+ G+GG G G + GG + +RR Sbjct: 12 GRDGPGGRGPGNDRRDSGRSFGDRRPERPDFKRGDGG-RGFGDRRGSGPPGGPDRGDRR 69
>HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)| Length = 336 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = -1 Query: 254 NMVAAAVDLGFPAPGG--ASPRPNPRESGRRRPDWATGE 144 N +AA ++ GG A+PRP PR++G ++P G+ Sbjct: 268 NRIAALQEMAQQMAGGTQAAPRPTPRQAGEQQPSGPWGQ 306
>MYOB_DICDI (P34092) Myosin IB heavy chain| Length = 1111 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 212 GGASPRPNPRESGRRRPDWATGEGGWIGRGA 120 GGA P P P++ G RP A +GG +GA Sbjct: 975 GGARPMPQPQQGGGARPMGAPQQGGAPQQGA 1005
>CCA_AERPE (Q9YB04) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA| nucleotidyltransferase) (tRNA adenylyl-/cytidylyl- transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT) Length = 435 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 224 FPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG 114 +P G P P RE R + GEGGW+ G G Sbjct: 330 YPIEGRLGPPPWERERAARFTEKRLGEGGWVWIGDDG 366
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 12/48 (25%) Frame = -1 Query: 200 PRPNPRES------------GRRRPDWATGEGGWIGRGASGSNWDRGG 93 PRP PR S G RP ++ GG GRG G RGG Sbjct: 243 PRPGPRPSPMNMPASRPTPPGGARPSTSSRSGGGRGRGGGGGAGPRGG 290 Score = 27.7 bits (60), Expect = 7.7 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -1 Query: 212 GGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDR-GG*EAHERRKKQ 63 GGA PR G R + GG GRG + + R GG + R+ K+ Sbjct: 283 GGAGPRGGGAGGGAPRTGFGGRPGGGRGRGGTAGAFGRPGGRPSRSRKSKK 333
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 227 GFPA-PGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDR 99 GFP PGG P+ + E+G + GE G G S N DR Sbjct: 1901 GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDR 1944
>SOX12_MOUSE (Q04890) SOX-12 protein| Length = 314 Score = 28.9 bits (63), Expect = 3.5 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = -1 Query: 266 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 90 +++Q A D G P PG P P G R P W G I R + W + Sbjct: 1 MVQQRGARAKRDGGPPPPG-----PGPAAEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52 Query: 89 EAHERRK 69 HERRK Sbjct: 53 --HERRK 57
>US02_EHV1B (P28964) Gene 68 protein| Length = 418 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Frame = -1 Query: 272 RPVMRQNMVAAAVDLG----FPAPGGASPRPNPRESGRRRPDWA 153 RP + ++ A VD PAPG PR P E G RP+ A Sbjct: 210 RPPTVKRVIYAVVDPARLREIPAPGRPLPRRRPSEGGDARPEAA 253
>RP54_XANCV (P77998) RNA polymerase sigma-54 factor| Length = 479 Score = 28.9 bits (63), Expect = 3.5 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -1 Query: 242 AAVDLGFPAPGGASPRPNPRES---GRRRPDWATGEGGWIGRGASGSNWDRGG*EAHER 75 AA D+ + AS RE R DW+ E W G G+ GS D +A ER Sbjct: 56 AASDIAVDSSPSASTEQPQREEVAPAERDEDWSQDELQWTGSGSGGSFDDDESGDAAER 114
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.5 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 230 LGFPAPGGASPRP-NPRESGRRRPDWATGEGGWIGR-GASG 114 +GFP P GA+ P P E G P A G G G GA G Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQG 609
>TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (DNA| topoisomerase III beta-1) Length = 862 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 Query: 157 QSGRRRPDSRGFGRGLAPPGAGNPR 231 + G R RG GRG PPG NPR Sbjct: 824 RGGPGRRQGRGRGRGRRPPGKPNPR 848
>CI066_HUMAN (Q5T8R8) Protein C9orf66| Length = 295 Score = 28.9 bits (63), Expect = 3.5 Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -1 Query: 281 AAERPVMRQNMV--AAAVDLGFPAPGGASPRPNPR---ESGR-RRPDWATGEGGWIGRGA 120 AAE N+V +A FP SPR R GR R P W G GG GRG Sbjct: 165 AAEHAQPSANLVCRSALETSAFPPSKPKSPRGRVRARSSDGRLRHPAWRAGSGGRGGRGP 224 Query: 119 S 117 S Sbjct: 225 S 225
>VTNC_HUMAN (P04004) Vitronectin precursor (Serum spreading factor) (S-protein)| (V75) [Contains: Vitronectin V65 subunit; Vitronectin V10 subunit; Somatomedin B] Length = 478 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -1 Query: 293 STGEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRP 162 S G + PV++ A A ++G P G RP GR +P Sbjct: 106 SKGNPEQTPVLKPEEEAPAPEVGASKPEGIDSRPETLHPGRPQP 149
>UL34_EBV (P03185) Protein BFRF1| Length = 336 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = -1 Query: 233 DLGFPAPGGASPRPNPRESGRRRPDWATGEGGW 135 D G GG PRP SG G GGW Sbjct: 199 DTGARVTGGGGPRPGVTHSGCLGDSHVRGRGGW 231
>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1250 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Frame = -1 Query: 212 GGASPRPNPRESGRRRPDWATGEGGWI---GRGASGSNWDRGG 93 GG P P P G R G GGW G G SG GG Sbjct: 771 GGGGPGPGPGGGGSGR---GAGSGGWSSGPGGGGSGGGGGSGG 810
>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC| 3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase) (EC 3.6.1.-) (Ap6A hydrolase) Length = 210 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%) Frame = -1 Query: 179 SGRRRPDWATGEGGW-----IGRGASGSNWDRGG*EAHERR 72 S ++ P W +GGW + + A W+ GG H R Sbjct: 62 SAKKHPSWVVPKGGWEADESVQQAALREGWEEGGLVGHITR 102
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = -1 Query: 227 GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 111 G PAPGGA+PR GR P G GG G G G+ Sbjct: 1099 GMPAPGGAAPR------GRGAP--PPGAGGPPGGGRGGA 1129
>MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (MCH receptor 1)| (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein coupled receptor 24) (Fragment) Length = 388 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%) Frame = -1 Query: 188 PRESGRR----RPDWATGEGGWIGRGASGSNW 105 P + GRR +P W G W+ A+G+ W Sbjct: 4 PGQGGRRWRLPQPAWVEGSSAWLWEPATGTGW 35
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 28.1 bits (61), Expect = 5.9 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 11/78 (14%) Frame = -1 Query: 293 STGEAAERPVMRQNMVAAAVDLGFP----APGGASPRP-------NPRESGRRRPDWATG 147 S+ + +RP+ R A G P +PG PRP P G RP Sbjct: 183 SSAQPVDRPIPRPVPRPGAPRPGAPRPGASPGNMPPRPGGVGGPGRPARPGAPRPGGGR- 241 Query: 146 EGGWIGRGASGSNWDRGG 93 GG GR G N+ GG Sbjct: 242 PGGPGGRDGGGGNYRGGG 259
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = -1 Query: 149 GEGGWIGRGASGSNWDRGG 93 G GGW GRG G RGG Sbjct: 502 GRGGWGGRGGRGGRGGRGG 520
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.1 bits (61), Expect = 5.9 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = -1 Query: 233 DLGFPAPGGASPRPN-PRESGRRRPDWATGEGGWIG-RGASG 114 D+G P P GAS P P G+R P G G G +GA G Sbjct: 1290 DVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKG 1331
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 11/57 (19%) Frame = -1 Query: 233 DLGFPAPGGASPRPNPR----------ESGRRRPDWATGEGGWIGR-GASGSNWDRG 96 D G P P G S P P+ G + P ATG G GR G GSN + G Sbjct: 790 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPG 846
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 11/57 (19%) Frame = -1 Query: 233 DLGFPAPGGASPRPNPR----------ESGRRRPDWATGEGGWIGR-GASGSNWDRG 96 D G P P G S P P+ G + P ATG G GR G GSN + G Sbjct: 791 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPG 847
>RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated protein 1)| Length = 290 Score = 28.1 bits (61), Expect = 5.9 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = -1 Query: 242 AAVDLGFPAPGG--ASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWD 102 AA++ GFPA G A+P P ATGE GA+ NWD Sbjct: 232 AAIESGFPATGDWEAAPAGFP----------ATGEWSDAAPGAAAPNWD 270
>WA22_MYCTU (P0A686) WAG22 antigen precursor| Length = 914 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = -1 Query: 281 AAERPVMRQNMVAAAVDLGFPAPG-GASPRPNPRESGRRRPDWATGEGGWIGRGASGSNW 105 AA P++ G P G GA+ P +G W G GG G GA G+N Sbjct: 93 AAVTPLLNSINAPVLAATGRPLIGNGANGAPGTGANGGDA-GWLIGNGGAGGSGAKGANG 151 Query: 104 DRGG 93 GG Sbjct: 152 GAGG 155
>WA22_MYCBO (P0A687) WAG22 antigen precursor| Length = 914 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = -1 Query: 281 AAERPVMRQNMVAAAVDLGFPAPG-GASPRPNPRESGRRRPDWATGEGGWIGRGASGSNW 105 AA P++ G P G GA+ P +G W G GG G GA G+N Sbjct: 93 AAVTPLLNSINAPVLAATGRPLIGNGANGAPGTGANGGDA-GWLIGNGGAGGSGAKGANG 151 Query: 104 DRGG 93 GG Sbjct: 152 GAGG 155
>VGLD_PRVRI (P07645) Protein gp50| Length = 402 Score = 28.1 bits (61), Expect = 5.9 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -1 Query: 302 RTVSTGEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPD 159 RT+ AA P A+D P+ G PRP PR R +P+ Sbjct: 243 RTLPRAHAAATPY--------AIDPARPSAGSPRPRPRPRPRPRPKPE 282
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%) Frame = -1 Query: 239 AVDLGFPAPGGASPRP--NPRESGRRRPDWATGEG 141 A D P PGG PRP PR G RP G Sbjct: 195 AADRPGPRPGGGGPRPGGGPRPGGAPRPQGGQRSG 229 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -1 Query: 242 AAVDLGFPAPGGASPRPN--PRESGRRRP 162 AA D P PGG +PRPN PR + P Sbjct: 149 AAEDKATPKPGGEAPRPNAMPRPMAKPGP 177
>SMG1_DROME (Q70PP2) Serine/threonine-protein kinase Smg1 (EC 2.7.11.1)| Length = 3218 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 155 ATGEGGWIGRGASGSNWDRGG*EAHE 78 ATG G G G S S W GG ++H+ Sbjct: 56 ATGSGNIAGLGGSESMWSPGGGKSHD 81
>YQFQ_BACSU (P54474) Hypothetical protein yqfQ| Length = 247 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -1 Query: 224 FPAPGGASPRPNPRESGRRRPD 159 +P PG P PN R GRR P+ Sbjct: 11 YPQPGPPRPMPNQRMMGRRPPN 32
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = -1 Query: 221 PAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDRGG 93 P PGGA P G RP G G A G N+ GG Sbjct: 194 PRPGGAVGGARPPRPGAPRPGGRPGAPGAGRSDAGGGNYRGGG 236
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = -1 Query: 221 PAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDRGG 93 P PGGA P G RP G G A G N+ GG Sbjct: 194 PRPGGAVGGARPPRPGAPRPGGRPGAPGAGRSDAGGGNYRGGG 236
>IF2_PSEU2 (Q4ZNR2) Translation initiation factor IF-2| Length = 841 Score = 27.7 bits (60), Expect = 7.7 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -1 Query: 281 AAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRE-SGRRRPDWATGEGGWIGRGASGSNW 105 AA PV V A PAP A+P + R+ +RRPD + R A G + Sbjct: 146 AAAEPVAAAEPVREAAPAAAPAPASAAPSADARKRDEQRRPDKPRAD----DRNARGGDG 201 Query: 104 DR 99 +R Sbjct: 202 ER 203
>PIWI_BRARE (Q8UVX0) Piwi-like protein 1| Length = 858 Score = 27.7 bits (60), Expect = 7.7 Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +1 Query: 160 SGRRRPDSRGFGRGLAP--PGAGNPRSTAAA 246 +GR R SRG GRG P PGA P S AA Sbjct: 2 TGRARARSRGRGRGQEPAAPGAQPPVSQEAA 32
>ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 553 Score = 27.7 bits (60), Expect = 7.7 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = -1 Query: 284 EAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWI 132 EAA P AAA PAP A+P P P + A G GG I Sbjct: 78 EAANEPAAAPAPAAAA-----PAPAAAAPAPAPAPAAAPAAAPAAGGGGTI 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.131 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,471,839 Number of Sequences: 219361 Number of extensions: 716043 Number of successful extensions: 3385 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 3023 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3364 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
