ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl17e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggagggcgtcctgcacaggaggatagagttccaccccgcc 236 |||||||||||| ||| | ||||||| || |||||||||||||| |||||||||| ||| Sbjct: 4229146 gcggcggcggcggcggcggcggagggggtgctgcacaggaggatcgagttccacctcgcg 4229087 Query: 237 aggaggccgcacgccgcggtggccgtcgggggaggcgggttccagatggagac 289 |||||| ||||| | | |||||| ||||||||||||||||||| ||||||||| Sbjct: 4229086 aggaggtcgcactcggtggtggcggtcgggggaggcgggttccggatggagac 4229034 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 28773208 gcggcggcggcgccggtgccgg 28773229 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 28566773 gcggcggcggcgccggtgccgg 28566794 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 27019683 cggcggcggcgccggtgccg 27019702 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 6213304 ccgcggcggcggcgccggtg 6213323
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 113 bits (57), Expect = 3e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggagggcgtcctgcacaggaggatagagttccaccccgcc 236 |||||||||||| ||| | ||||||| || |||||||||||||| |||||||||| ||| Sbjct: 74367 gcggcggcggcggcggcggcggagggggtgctgcacaggaggatcgagttccacctcgcg 74308 Query: 237 aggaggccgcacgccgcggtggccgtcgggggaggcgggttccagatggagac 289 |||||| ||||| | | |||||| ||||||||||||||||||| ||||||||| Sbjct: 74307 aggaggtcgcactcggtggtggcggtcgggggaggcgggttccggatggagac 74255
>dbj|AK102933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114H16, full insert sequence Length = 3013 Score = 93.7 bits (47), Expect = 3e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 207 ctgcacaggaggatagagttccaccccgccaggaggccgcacgccgcggtggccgtcggg 266 |||||||||||||| |||||||||| ||| |||||| ||||| | | |||||| |||||| Sbjct: 2 ctgcacaggaggatcgagttccacctcgcgaggaggtcgcactcggtggtggcggtcggg 61 Query: 267 ggaggcgggttccagatggagac 289 ||||||||||||| ||||||||| Sbjct: 62 ggaggcgggttccggatggagac 84
>ref|XM_470626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 250 ccgcggtggccgtcgggggaggcgggttc 278 ||||||||||||||||||| ||||||||| Sbjct: 152 ccgcggtggccgtcgggggcggcgggttc 180
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcgggttc 278 ||||||||||||||||||| ||||||||| Sbjct: 7036794 ccgcggtggccgtcgggggcggcgggttc 7036766
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 250 ccgcggtggccgtcgggggaggcgggttc 278 ||||||||||||||||||| ||||||||| Sbjct: 45571 ccgcggtggccgtcgggggcggcgggttc 45599
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcgggttc 278 ||||||||||||||||||| ||||||||| Sbjct: 7034689 ccgcggtggccgtcgggggcggcgggttc 7034661
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||||||||| Sbjct: 725 gcggcggcggcgccggtgccggag 702
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 180 gcggcggcgccggtgccggagggcgtcc 207 |||||||||||||||||| ||||||||| Sbjct: 40738 gcggcggcgccggtgccgcagggcgtcc 40711
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||||||||| Sbjct: 23876302 gcggcggcggcgccggtgccggag 23876279 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 40561915 gcggcggcggcgccggtgccgg 40561894 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 36051078 ccgcggcggcggcgccggtg 36051059 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 31267289 ccgcggcggcggcgccggtg 31267308
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||||||||| Sbjct: 22706 gcggcggcggcgccggtgccggag 22683
>ref|XM_468249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3944 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 208 tgcacaggaggatagagttccaccccgccaggaggccgc 246 ||||||||||||| ||||||||| | || |||||||||| Sbjct: 148 tgcacaggaggattgagttccacgcggcgaggaggccgc 186
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgga 199 ||||||||||||||||||||||| Sbjct: 24631 gcggcggcggcgccggtgccgga 24653
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgga 199 ||||||||||||||||||||||| Sbjct: 125319 gcggcggcggcgccggtgccgga 125341
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgga 199 ||||||||||||||||||||||| Sbjct: 7691636 gcggcggcggcgccggtgccgga 7691614 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 tgtccgcggcggcggcgccgg 192 ||||||||||||||||||||| Sbjct: 25205884 tgtccgcggcggcggcgccgg 25205864 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||| Sbjct: 26004343 gcggcggcggcgccggtggcggag 26004366 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 23056199 ccgcggcggcggcgccggtg 23056180 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 22998192 gcggcgccggcgccggtgccggag 22998215 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 22990812 gcggcgccggcgccggtgccggag 22990835
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 208 tgcacaggaggatagagttccaccccgccaggaggccgc 246 ||||||||||||| ||||||||| | || |||||||||| Sbjct: 33816004 tgcacaggaggattgagttccacgcggcgaggaggccgc 33816042 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggagg 201 |||||||||||||||| |||||||| Sbjct: 3955791 gcggcggcggcgccggggccggagg 3955767 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cggcgcgacgtcgaaaccctagtg 158 |||||||| ||||||||||||||| Sbjct: 7634131 cggcgcgaggtcgaaaccctagtg 7634154
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 208 tgcacaggaggatagagttccaccccgccaggaggccgc 246 ||||||||||||| ||||||||| | || |||||||||| Sbjct: 32582 tgcacaggaggattgagttccacgcggcgaggaggccgc 32620
>dbj|AK120097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022C03, full insert sequence Length = 3942 Score = 46.1 bits (23), Expect = 0.063 Identities = 35/39 (89%) Strand = Plus / Plus Query: 208 tgcacaggaggatagagttccaccccgccaggaggccgc 246 ||||||||||||| ||||||||| | || |||||||||| Sbjct: 147 tgcacaggaggattgagttccacgcggcgaggaggccgc 185
>dbj|AK105539.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H08, full insert sequence Length = 1302 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgga 199 ||||||||||||||||||||||| Sbjct: 60 gcggcggcggcgccggtgccgga 82
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgga 199 ||||||||||||||||||||||| Sbjct: 7761723 gcggcggcggcgccggtgccgga 7761701 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 tgtccgcggcggcggcgccgg 192 ||||||||||||||||||||| Sbjct: 25524542 tgtccgcggcggcggcgccgg 25524522 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||| Sbjct: 26323039 gcggcggcggcgccggtggcggag 26323062 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 23366109 ccgcggcggcggcgccggtg 23366090 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 23308102 gcggcgccggcgccggtgccggag 23308125 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 23300722 gcggcgccggcgccggtgccggag 23300745
>ref|NM_197638.1| Oryza sativa (japonica cultivar-group) putative receptor kinase (OSJNBa0082M15.20), mRNA Length = 2646 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||||| Sbjct: 89 ccgcggcggcggcgccggcgccggag 114
>ref|XM_463671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1227 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 23 gcggcggcggcgccggtgccgg 44
>ref|NM_009271.3| Mus musculus Rous sarcoma oncogene (Src), transcript variant 1, mRNA Length = 3887 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 527 ccgcggtggccgtcggcggaggcggg 502
>ref|NM_001025395.2| Mus musculus Rous sarcoma oncogene (Src), transcript variant 2, mRNA Length = 3869 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 527 ccgcggtggccgtcggcggaggcggg 502
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 205307 gcggcggcggcgccggtgccgg 205286
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 ccggtgccggagggcgtcctgc 210 |||||||||||||||||||||| Sbjct: 280191 ccggtgccggagggcgtcctgc 280212
>gb|BC039953.1| Mus musculus Rous sarcoma oncogene, transcript variant 2, mRNA (cDNA clone MGC:49547 IMAGE:4192014), complete cds Length = 3911 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 537 ccgcggtggccgtcggcggaggcggg 512
>emb|AJ719441.1| Gallus gallus mRNA for hypothetical protein, clone 2f21 Length = 3982 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 gggatggcggaggtgtccgcggcggcggcg 188 |||||||||| |||| |||||||||||||| Sbjct: 78 gggatggcggcggtggccgcggcggcggcg 107
>ref|NM_001007831.1| Gallus gallus phosphorylase kinase, beta (PHKB), mRNA Length = 3982 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 gggatggcggaggtgtccgcggcggcggcg 188 |||||||||| |||| |||||||||||||| Sbjct: 78 gggatggcggcggtggccgcggcggcggcg 107
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||||| Sbjct: 110963 ccgcggcggcggcgccggcgccggag 110988
>dbj|AK146056.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530027F01 product:Rous sarcoma oncogene, full insert sequence Length = 3814 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 474 ccgcggtggccgtcggcggaggcggg 449
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||||| Sbjct: 20953428 ccgcggcggcggcgccggcgccggag 20953403 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 15415622 gcggcggcggcgccggtgccgg 15415643 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 5429128 cggcggcggcgccggtgccg 5429109
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 132985 gcggcggcggcgccggtgccgg 133006
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 3893 gcggcggcggcgccggtgccgg 3872
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 123539 gcggcggcggcgccggtgccgg 123518
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 80983 gcggcggcggcgccggtgccgg 81004
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 58251 gcggcggcggcgccggtgccgg 58272
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 849 gcggcggcggcgccggtgccgg 828
>dbj|AK103046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G06, full insert sequence Length = 1815 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 215 gcggcggcggcgccggtgccgg 236
>dbj|AK102353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091F07, full insert sequence Length = 1613 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 176 gcggcggcggcgccggtgccgg 155
>gb|AY902331.1| Mus musculus strain CAST/EiJ Src (Src) gene, complete cds Length = 2355 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 232 ccgcggtggccgtcggcggaggcggg 207
>dbj|AK066841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A03, full insert sequence Length = 3059 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||||| Sbjct: 166 ccgcggcggcggcgccggcgccggag 191
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||||| Sbjct: 20964692 ccgcggcggcggcgccggcgccggag 20964667 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 15423863 gcggcggcggcgccggtgccgg 15423884 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 5429915 cggcggcggcgccggtgccg 5429896
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete sequence Length = 179832 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 49822 ccgcggtggccgtcggcggaggcggg 49797
>gb|M17031.1|MUSSRCPP6 Mouse neuronal proto-oncogene c-src mRNA encoding tyrosine-specific protein kinase, complete cds Length = 1626 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ccgcggtggccgtcgggggaggcggg 275 |||||||||||||||| ||||||||| Sbjct: 143 ccgcggtggccgtcggcggaggcggg 118
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccgg 198 |||||||||||||||||||||| Sbjct: 41930 gcggcggcggcgccggtgccgg 41909
>ref|XM_481575.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cgcggcggcggcgccggtgccggag 200 ||||||||||| ||||||||||||| Sbjct: 111 cgcggcggcggtgccggtgccggag 135
>ref|XM_464303.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggagg 201 |||||||||||||||| |||||||| Sbjct: 106 gcggcggcggcgccggggccggagg 130
>ref|XM_450749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ggcggaggtgtccgcggcggcggcg 188 ||||| ||||||||||||||||||| Sbjct: 642 ggcgggggtgtccgcggcggcggcg 618
>ref|XM_478685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tccgcggcggcggcgccggtg 194 ||||||||||||||||||||| Sbjct: 935 tccgcggcggcggcgccggtg 955
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccg 197 ||||||||||||||||||||| Sbjct: 97815 gcggcggcggcgccggtgccg 97835
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cagcgccgctccggcgcgacg 144 ||||||||||||||||||||| Sbjct: 1866102 cagcgccgctccggcgcgacg 1866082
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cggcgccggtgccggagggcg 204 ||||||||||||||||||||| Sbjct: 2017570 cggcgccggtgccggagggcg 2017550
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 tgtccgcggcggcggcgccgg 192 ||||||||||||||||||||| Sbjct: 81154 tgtccgcggcggcggcgccgg 81134
>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0051D10, complete sequence Length = 140272 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tgtccgcggcggcggcgccgg 192 ||||||||||||||||||||| Sbjct: 139842 tgtccgcggcggcggcgccgg 139862
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 ggtgtccgcggcggcggcgccggtg 194 ||||||||||| ||||||||||||| Sbjct: 592714 ggtgtccgcggtggcggcgccggtg 592690
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ggcggaggtgtccgcggcggcggcg 188 ||||| ||||||||||||||||||| Sbjct: 12584783 ggcgggggtgtccgcggcggcggcg 12584759
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cgcggcggcggcgccggtgccggag 200 ||||||||||| ||||||||||||| Sbjct: 13912332 cgcggcggcggtgccggtgccggag 13912308
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tccgcggcggcggcgccggtg 194 ||||||||||||||||||||| Sbjct: 22202772 tccgcggcggcggcgccggtg 22202752 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gtccgcggcggcggcgccggtgcc 196 |||||||||||||||| ||||||| Sbjct: 19883963 gtccgcggcggcggcggcggtgcc 19883940 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 18605744 ccgcggcggcggcgccggtg 18605725
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccg 197 ||||||||||||||||||||| Sbjct: 20675775 gcggcggcggcgccggtgccg 20675795
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cggaggtgtccgcggcggcgg 186 ||||||||||||||||||||| Sbjct: 2934133 cggaggtgtccgcggcggcgg 2934153 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cggaggtgtccgcggcggcggcgc 189 ||||||||| |||||||||||||| Sbjct: 6393328 cggaggtgtacgcggcggcggcgc 6393305
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tccgcggcggcggcgccggtg 194 ||||||||||||||||||||| Sbjct: 8018 tccgcggcggcggcgccggtg 7998
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cgcggcggcggcgccggtgccggag 200 ||||||||||| ||||||||||||| Sbjct: 120051 cgcggcggcggtgccggtgccggag 120027
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ggcggaggtgtccgcggcggcggcg 188 ||||| ||||||||||||||||||| Sbjct: 50721 ggcgggggtgtccgcggcggcggcg 50697
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggagg 201 |||||||||||||||| |||||||| Sbjct: 2457 gcggcggcggcgccggggccggagg 2433
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ggcggaggtgtccgcggcggcggcg 188 ||||| ||||||||||||||||||| Sbjct: 100110 ggcgggggtgtccgcggcggcggcg 100086
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggagg 201 |||||||||||||||| |||||||| Sbjct: 154262 gcggcggcggcgccggggccggagg 154238
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cgcggcggcggcgccggtgccggag 200 ||||||||||| ||||||||||||| Sbjct: 56727 cgcggcggcggtgccggtgccggag 56703
>dbj|AK108030.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B04, full insert sequence Length = 1309 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cgcggcggcggcgccggtgccggag 200 ||||||||||| ||||||||||||| Sbjct: 213 cgcggcggcggtgccggtgccggag 237
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccgg 198 ||||||||||||||||||||| Sbjct: 2552497 cggcggcggcgccggtgccgg 2552477
>dbj|AB045121.1| Oryza sativa (japonica cultivar-group) RRF1 mRNA for RING finger 1, complete cds Length = 1453 Score = 42.1 bits (21), Expect = 0.98 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ggcggaggtgtccgcggcggcggcg 188 ||||| ||||||||||||||||||| Sbjct: 736 ggcgggggtgtccgcggcggcggcg 712
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 1537345 cggcggcggcgccggtgccg 1537326
>ref|NM_190532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 942 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 711 ccgcggcggcggcgccggtg 730
>ref|NM_191194.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 698 ccgcggcggcggcgccggtg 717
>ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 635 ccgcggcggcggcgccggtg 654
>ref|XM_478423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 375 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gtccgcggcggcggcgccggtgcc 196 |||||||||||||||| ||||||| Sbjct: 273 gtccgcggcggcggcggcggtgcc 250
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 72202 ccgcggcggcggcgccggtg 72183 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 14195 gcggcgccggcgccggtgccggag 14218 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 6815 gcggcgccggcgccggtgccggag 6838
>ref|XM_368518.1| Magnaporthe grisea 70-15 chromosome VI predicted protein (MG00726.4) partial mRNA Length = 891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ggcggcggcgccggtgccgg 198 |||||||||||||||||||| Sbjct: 529 ggcggcggcgccggtgccgg 548
>ref|XM_869625.1| PREDICTED: Bos taurus similar to zinc finger protein 408 (LOC617377), mRNA Length = 2970 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggccgcacgccgcggtggcc 260 |||||||||||||||||||| Sbjct: 1238 ggccgcacgccgcggtggcc 1219
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cgcggcggcggcgccggtgc 195 |||||||||||||||||||| Sbjct: 1843551 cgcggcggcggcgccggtgc 1843570
>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0024E08, complete sequence Length = 131946 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||| Sbjct: 27910 gcggcggcggcgccggtggcggag 27933
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||| ||||||||||| Sbjct: 87392 gcggcggcggcggcggtgccggag 87415
>ref|NM_006675.3| Homo sapiens tetraspanin 9 (TSPAN9), mRNA Length = 4338 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||| ||||||||||| Sbjct: 2 gcggcggcggcggcggtgccggag 25
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||||||||| ||||| Sbjct: 623 gcggcggcggcgccggtggcggag 600
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 189050 cggcggcggcgccggtgccg 189031
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 125258 cggcggcggcgccggtgccg 125239
>dbj|AK027366.1| Homo sapiens cDNA FLJ14460 fis, clone HEMBB1002600, highly similar to Homo sapiens tetraspan NET-5 mRNA Length = 1988 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||||||||| ||||||||||| Sbjct: 14 gcggcggcggcggcggtgccggag 37
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gtccgcggcggcggcgccgg 192 |||||||||||||||||||| Sbjct: 80725 gtccgcggcggcggcgccgg 80744
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 114520 cggcggcggcgccggtgccg 114539
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 23554047 ccgcggcggcggcgccggtg 23554028
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 21572 ccgcggcggcggcgccggtg 21591
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 63803 ccgcggcggcggcgccggtg 63784
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 30798 ccgcggcggcggcgccggtg 30779
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 58286 ccgcggcggcggcgccggtg 58267
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 143444 cggcggcggcgccggtgccg 143463
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 127123 ccgcggcggcggcgccggtg 127142
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 7380 ccgcggcggcggcgccggtg 7399
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gtccgcggcggcggcgccggtgcc 196 |||||||||||||||| ||||||| Sbjct: 48613 gtccgcggcggcggcggcggtgcc 48590
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gtccgcggcggcggcgccggtgcc 196 |||||||||||||||| ||||||| Sbjct: 124122 gtccgcggcggcggcggcggtgcc 124099
>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_E05 Length = 101333 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cggcgcgacgtcgaaaccctagtg 158 |||||||| ||||||||||||||| Sbjct: 50891 cggcgcgaggtcgaaaccctagtg 50914
>dbj|AK110663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F05, full insert sequence Length = 1253 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 817 ccgcggcggcggcgccggtg 836
>dbj|AK109768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A03, full insert sequence Length = 1931 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 166 gcggcgccggcgccggtgccggag 189
>dbj|AK105843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F10, full insert sequence Length = 824 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggcggcggcgccggtgccg 197 |||||||||||||||||||| Sbjct: 412 cggcggcggcgccggtgccg 393
>dbj|AK070679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062O22, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cggcgcgacgtcgaaaccctagtg 158 |||||||| ||||||||||||||| Sbjct: 160 cggcgcgaggtcgaaaccctagtg 137
>dbj|AK069228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014N04, full insert sequence Length = 1776 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 359 ccgcggcggcggcgccggtg 340
>dbj|AK067827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120O20, full insert sequence Length = 2434 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 91 gcggcgccggcgccggtgccggag 114
>dbj|AK066261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059N14, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 1698 ccgcggcggcggcgccggtg 1717
>dbj|AK058531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A08, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 |||||| ||||||||||||||||| Sbjct: 233 gcggcgccggcgccggtgccggag 256
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gtgtccgcggcggcggcgccggtg 194 ||||||||||| |||||||||||| Sbjct: 2108657 gtgtccgcggctgcggcgccggtg 2108680
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 60184 ccgcggcggcggcgccggtg 60203
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 gcggcggcggcgccggtgccggag 200 ||||||||||||||| |||||||| Sbjct: 2767207 gcggcggcggcgccgatgccggag 2767230
>gb|AC156495.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0005D12, complete sequence Length = 88500 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ggcggcggcgccggtgccgg 198 |||||||||||||||||||| Sbjct: 5795 ggcggcggcgccggtgccgg 5776
>emb|AJ875019.1| Streptoalloteichus hindustanus partial apramycin biosynthesis gene cluster, type strain DSM 44523T Length = 39979 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gcgccgctccggcgcgacgtcgaa 149 ||||||||||||||||||| |||| Sbjct: 39616 gcgccgctccggcgcgacggcgaa 39639
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggatggcggaggtgtccgcg 179 |||||||||||||||||||| Sbjct: 1832100 ggatggcggaggtgtccgcg 1832119
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 23482238 ccgcggcggcggcgccggtg 23482219
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgcggcggcggcgccggtg 194 |||||||||||||||||||| Sbjct: 152363 ccgcggcggcggcgccggtg 152382
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ggcggcggcgccggtgccgg 198 |||||||||||||||||||| Sbjct: 3071285 ggcggcggcgccggtgccgg 3071304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,217,742 Number of Sequences: 3902068 Number of extensions: 2217742 Number of successful extensions: 75915 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70886 Number of HSP's gapped (non-prelim): 5025 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
