>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)|
          Length = 942

 Score =  199 bits (505), Expect = 2e-51
 Identities = 95/113 (84%), Positives = 105/113 (92%)
 Frame = +1

Query: 55  MDSEDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIA 234
           M+ +DF PEGGKLPE KLDARQAQGFISFFKKLP+DPRA+RLFDRRDYYTAHGENATFIA
Sbjct: 1   MEGDDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIA 60

Query: 235 KAYYHTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSG 393
           + YYHTM+ALRQLG +SDGI S SVS+AMFETIARN+LL+RTD TLELYEGSG
Sbjct: 61  RTYYHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSG 113

>MSH2_ARATH (O24617) DNA mismatch repair protein MSH2 (AtMsh2)|
          Length = 937

 Score =  167 bits (423), Expect = 6e-42
 Identities = 79/105 (75%), Positives = 91/105 (86%)
 Frame = +1

Query: 79  EGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMT 258
           E  KLPELKLDA+QAQGF+SF+K LP D RA+R FDR+DYYTAHGEN+ FIAK YYHT T
Sbjct: 7   EQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTTT 66

Query: 259 ALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSG 393
           ALRQLG  S+ +SSVS+SR MFETIAR+LLL+R DHT+ELYEGSG
Sbjct: 67  ALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSG 111

>MSH2_NEUCR (O13396) DNA mismatch repair protein msh-2|
          Length = 937

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +1

Query: 94  PELKLDARQAQGFISFFKKLPK-DPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQ 270
           PELK+D     GFI F+K LP+    AIR+FDR D+YTAHG++ATFIA+  Y T + +RQ
Sbjct: 5   PELKVD--DEHGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62

Query: 271 LG-GNSDGISSVSVSRAMFETIARNLL 348
           LG  +  G+ SV+++  +F    R  L
Sbjct: 63  LGRSDHTGLPSVTMTVTVFRQFLREAL 89

>MSH2_CERAE (Q5XXB5) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 933

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +1

Query: 100 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 276
           L+L++    GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 384
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

>MSH2_MOUSE (P43247) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 935

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +1

Query: 100 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 276
           L+L+     GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 384
              S  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

>MSH2_HUMAN (P43246) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 934

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +1

Query: 100 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 276
           L+L++    GF+ FF+ +P+ P   +RLFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 384
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

>MSH2_BOVIN (Q3MHE4) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 934

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +1

Query: 100 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 276
           L+LD+    GF+ FF+ +P+ P   +RLFDR D+YTAH E+A   A+  + T   ++ +G
Sbjct: 9   LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68

Query: 277 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 384
              +  + SV +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYK 104

>MSH2_RAT (P54275) DNA mismatch repair protein Msh2 (MutS protein homolog 2)|
          Length = 933

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +1

Query: 100 LKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLG 276
           L+L+     GF+ FF+ +P+ P   + LFDR D+YTAHGE+A   A+  + T   ++ +G
Sbjct: 9   LQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 277 -GNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYE 384
              +  + +V +S+  FE+  ++LLL R  + +E+Y+
Sbjct: 69  PAGAKTLQTVVLSKMNFESFVKDLLLVR-HYRVEVYK 104

>MSH2_SCHPO (O74773) DNA mismatch repair protein msh2|
          Length = 982

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 26/71 (36%), Positives = 46/71 (64%)
 Frame = +1

Query: 136 SFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLGGNSDGISSVSVSR 315
           +F++K+PKD   +R+FDR ++Y A GE+A+F+A+  YHT + L+    N    S  ++S 
Sbjct: 20  NFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKH--HNVSNTSYCNLSP 77

Query: 316 AMFETIARNLL 348
           ++F   A ++L
Sbjct: 78  SLFIKFAEDVL 88

>MSH2_YEAST (P25847) DNA mismatch repair protein MSH2|
          Length = 964

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
 Frame = +1

Query: 94  PELKL-DARQAQGFISFFKKLPKDP-RAIRLFDRRDYYTAHGENATFIAKAYYHTMTALR 267
           PELK  D  + + F   +  LPK P + IRL D+ DYYT  G +A F+A + YHT + L+
Sbjct: 6   PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65

Query: 268 QLGGNSDGISS---------VSVSRAMFETIARNLLLDRTDHTLELYE 384
                 D +++         V+VS  +  T+ +  LLD   + +E+Y+
Sbjct: 66  NC--QLDPVTAKNFHEPTKYVTVSLQVLATLLKLCLLD-LGYKVEIYD 110

>MSH2_DROME (P43248) DNA mismatch repair protein spellchecker 1|
          Length = 917

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +1

Query: 94  PELKLDARQAQGFISFFKKLPKDPRA-IRLFDRRDYYTAHG-ENATFIAKAYYHTMTALR 267
           P L +D    + FI F  KL + P   +R FD  D YT HG ++   +AK  Y +   + 
Sbjct: 12  PTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71

Query: 268 QL--GGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELY 381
            L      + +  VS+S+  FE   R LLL R ++ +E+Y
Sbjct: 72  ALLPDDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVY 110

>GFI1_HUMAN (Q99684) Zinc finger protein Gfi-1 (Growth factor independence 1)|
          Length = 422

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = +3

Query: 21  PALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPG 128
           PA  P  PA LYG +R  A GG   GA   C A  G
Sbjct: 157 PAPEPGHPAALYGPKR--AAGGAGAGAPGSCSAGAG 190

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 6   SPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASP 125
           SP+RSP LPP+    L       AG G+ P    + + SP
Sbjct: 356 SPNRSPCLPPAPEVALPKPVTQAAGSGRCPSPNLQAQESP 395

>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2813

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +3

Query: 18  SPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQEVAE 158
           SPAL  S+PA   G  R  +GG   P  Q++  A+PG   LL++V E
Sbjct: 194 SPALTRSSPAPGSGYSR--SGGRSTPSTQSQRRAAPGEGGLLKDVLE 238

>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 258 CLKATGR*L*WNLKCQC*QGYV*DHCPQPFVR 353
           CL   G     + +CQC QG+   HC  P+VR
Sbjct: 198 CLNLPG-----SYRCQCGQGFTGQHCDSPYVR 224

>RASH_MSVHA (P01115) Transforming protein p29 precursor [Contains: Transforming|
           protein p21]
          Length = 241

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 3   ISPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLL 143
           ++P R+PALP   P    G     +GG +APG  A  EA   + L++
Sbjct: 18  VAPVRAPALPRPAP----GAVAPASGGARAPGLAAPVEAMTEYKLVV 60

>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 6   SPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASP 125
           SP+RSP +PP+    L       AG GK P    + + SP
Sbjct: 356 SPNRSPCVPPAPEVALPRPVTQGAGPGKCPSPNLQTQESP 395

>MURG_BRUME (Q8YI66) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 379

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 6   SPSRSPAL----PPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQE 149
           +P RSP L     P TPAG   + RLL  GG + GAQ   +A P    LL E
Sbjct: 166 NPVRSPVLVAAATPYTPAGKDDRFRLLVFGG-SQGAQFFSQAIPAAVALLPE 216

>MURG_BRUAB (Q57C78) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 379

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 6   SPSRSPAL----PPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQE 149
           +P RSP L     P TPAG   + RLL  GG + GAQ   +A P    LL E
Sbjct: 166 NPVRSPVLVAAATPYTPAGKDDRFRLLVFGG-SQGAQFFSQAIPAAVALLPE 216

>DPO41_METMA (Q8PYH6) DNA polymerase IV 1 (EC 2.7.7.7) (Pol IV 1)|
          Length = 365

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +1

Query: 145 KKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLGGNSDGISSVSVSRAMF 324
           KKL  +P A+ L  R+D+YT+  +    I ++Y           GN D    +SV  A  
Sbjct: 68  KKL--NPEAVFLPVRKDFYTSVSDRIMEILRSYADP--------GNGDSFEQISVDEAFL 117

Query: 325 ETIAR 339
           E+  R
Sbjct: 118 ESSER 122

>KPC2_DROME (P13677) Protein kinase C, eye isozyme (EC 2.7.11.13) (PKC)|
          (dPKC53E(EY)) (Protein INAC) (Inactivation no
          after-potential C protein) (Photoreceptor-specific PKC)
          (Eye-PKC)
          Length = 700

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 27 LPPSTPAGLYGQRRLLAGGGKAPG 98
          LPPS P+   G +   AG GK PG
Sbjct: 14 LPPSVPSAAPGAKAPAAGAGKGPG 37

>Y406_METJA (Q57849) Hypothetical sugar kinase MJ0406|
          Length = 302

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = +1

Query: 82  GGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTA 261
           GGK+ ++      A  +I   +K P+   +I++   R YY     N          T   
Sbjct: 2   GGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAAN----------TAVG 51

Query: 262 LRQLGGNSDGISSV--SVSRAMFETIARNL 345
           +++LG NS+ +S V      + +E   +NL
Sbjct: 52  IKKLGVNSELLSCVGYDFKNSGYERYLKNL 81

>TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Protein|
           matotopetli)
          Length = 814

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 301 HLRFHQSYRPVALRQSLCD-SMPLQ*RLHSHHEQCN 197
           HLRFHQ  +P   ++  CD    ++  L+ H  +C+
Sbjct: 529 HLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCH 564

>SKI3_YEAST (P17883) Superkiller 3 protein|
          Length = 1432

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 106 LDARQAQGFISFFKKLPKDPRAIRLF 183
           LD   A   I +FKK PKDP A+ L+
Sbjct: 297 LDNMDAPLIIKYFKKFPKDPLAMILY 322

>CDC2D_ANTMA (Q38775) Cell division control protein 2 homolog D (EC 2.7.11.22)|
           (EC 2.7.11.23)
          Length = 312

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +1

Query: 133 ISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHT--MTALRQLGGNSDGISSVS 306
           +S  + L +DP  +RL D +      G+   ++   Y  T     +R      + I+ ++
Sbjct: 62  VSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMN 121

Query: 307 VSRAMFE 327
           V   M++
Sbjct: 122 VKSLMYQ 128

>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 930

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
 Frame = +3

Query: 6   SPSRSPALPPSTPAGLYGQRRLLAGGGKAP---------GAQARCEASPGFHLL 140
           +P+R     P+   G+ G RRL   G +AP         G  +R    PG HLL
Sbjct: 831 APARPALSAPAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLL 884

>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type|
           coiled-coil domain protein 1)
          Length = 970

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 6   SPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEAS 122
           +PSR P+LP   PA    +  +++   K P   AR EAS
Sbjct: 563 APSRPPSLPTPRPASQPRKAPVISSTPKLPALAAREEAS 601

>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)|
           (PLIC-1)
          Length = 582

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 12  SRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQEVAE 158
           S S     STPAG     +  +G    PGA A    +PG   LLQ++ E
Sbjct: 337 STSGGTATSTPAG-----QSTSGPSLVPGAGASMFNTPGMQSLLQQITE 380

>ERC2_RAT (Q8K3M6) ERC protein 2 (CAZ-associated structural protein 1)|
          (CAST1) (Cast) (Cytomatrix protein p110)
          Length = 957

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 6  SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 98
          SPSRSP LP S      G RR  +GGG   G
Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41

>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1)|
          (CAST1)
          Length = 957

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 6  SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 98
          SPSRSP LP S      G RR  +GGG   G
Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41

>ERC2_HUMAN (O15083) ERC protein 2|
          Length = 957

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 6  SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 98
          SPSRSP LP S      G RR  +GGG   G
Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41

>DOPR2_DROME (Q24563) Dopamine receptor 2|
          Length = 539

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -3

Query: 220 HSHHEQCNNPGDQIDEWPEDPSATS*RRR*NPGLASH 110
           HSHH   N+ G      PE+P         N GLA H
Sbjct: 359 HSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARH 395

>F18B2_HUMAN (Q96ET8) Protein FAM18B2|
          Length = 276

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 42  PAGLYGQRRLLA--GGGKAPGAQARCEASPGFHL 137
           PA L+   RL A  GGG++P ++   E  P FHL
Sbjct: 238 PARLFLSLRLWAWRGGGESPNSRGTGEPGPKFHL 271

>MURG_BRUSU (Q8CY39) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 379

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +3

Query: 6   SPSRSPAL----PPSTPAGLYGQRRLLAGGGKAPGAQARCEASPGFHLLLQE 149
           +P R P L     P TPAG   + RLL  GG + GAQ   +A P    LL E
Sbjct: 166 NPVRPPVLVAAATPYTPAGKDDRFRLLVFGG-SQGAQFFSQAIPAAVALLPE 216

>PPRB_MOUSE (Q925J9) Peroxisome proliferator-activated receptor-binding protein|
            (PBP) (PPAR-binding protein) (Thyroid hormone
            receptor-associated protein complex 220 kDa component)
            (Trap220) (Thyroid receptor-interacting protein 2)
            (TRIP-2)
          Length = 1575

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 6    SPSRSPALPPSTPAGLYGQRRLLAGGGKAPGAQARCEASPG 128
            SPS S +  P TP           GG K+PG+  R +  PG
Sbjct: 1021 SPSHSSSNRPFTPP-------TSTGGSKSPGSSGRSQTPPG 1054

>SF04_HUMAN (Q8IWZ8) Splicing factor 4 (RNA-binding protein RBP)|
          Length = 645

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 6   SPSRSPALPPSTPAGLYGQRRLL 74
           +P+ +P+ PPSTP    G+R LL
Sbjct: 105 APTSAPSAPPSTPTPSAGKRSLL 127

>CCPR_KLULA (Q6CW24) Cytochrome c peroxidase, mitochondrial precursor (EC|
           1.11.1.5) (CCP)
          Length = 346

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 43  RRGCMDS-EDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGEN 219
           R G +D  ED  PE G+LP+   DA+  + F  F +   +D + + L         H +N
Sbjct: 180 RSGRVDQPEDTTPENGRLPDASKDAKYVRCF--FHRLNFEDRQVVALLGAHALGKTHLKN 237

Query: 220 ATF 228
           + F
Sbjct: 238 SGF 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,654,123
Number of Sequences: 219361
Number of extensions: 1048997
Number of successful extensions: 3238
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3225
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)