ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl17d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF024589.1| X Tritordeum sp. glycine decarboxylase P subunit mRNA, complete cds Length = 3487 Score = 634 bits (320), Expect = e-179 Identities = 353/364 (96%) Strand = Plus / Plus Query: 65 cccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcggcc 124 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 251 cccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggaggcacaactccgcc 310 Query: 125 acccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcgctc 184 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 311 acccccgccgagcaggccgtcatggcgtccgagtgcggcttcaacaccctcgacgcgctc 370 Query: 185 accgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaagttc 244 | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 371 atcgacgcaaccgtcccggccgcaatccgcgcgccgccgatgcagttcaccggcaagttc 430 Query: 245 gacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatgaac 304 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 431 gacgccggcttcaccgagtcgcagatgctcgaacacatggcgcacctcgcctccatgaac 490 Query: 305 aagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtcata 364 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 491 aagacctacaagtccttcatcgggatgggctactacaacacccacatcccggccgtcata 550 Query: 365 ctgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcggag 424 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 551 ctgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccctaccaggcggag 610 Query: 425 atcg 428 |||| Sbjct: 611 atcg 614
>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds Length = 3408 Score = 480 bits (242), Expect = e-132 Identities = 329/358 (91%) Strand = Plus / Plus Query: 71 tccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcggccaccccc 130 ||||| || |||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 251 tccgtctccgcgctgcagcccagcgacaccttcccgcggaggcacaactccgcctccccc 310 Query: 131 gccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcgctcaccgac 190 ||||||||| |||| ||||| ||| ||||||||||||||||||||| | |||| |||| Sbjct: 311 gccgagcagaccgtcatggcctccacctgcggcttcaacaccctcgactccctcatcgac 370 Query: 191 gccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaagttcgacgca 250 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 371 gccaccgtcccggccgcgatccgcgcgccgccgatgcagttcacgggcaagttcgacgcc 430 Query: 251 ggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatgaacaagacc 310 |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| | Sbjct: 431 ggcttcacggagtcgcagatgctcgagcacatggcgcacctcgcatccatgaacaaggtc 490 Query: 311 tacaagtccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgc 370 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 491 tacaagtccttcatcgggatgggatactacaacacccacatcccggccgtcatactgcgc 550 Query: 371 aacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatcg 428 |||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||| Sbjct: 551 aacctcatggagaaccccgcctggtacacgcagtacacgccctaccaggccgagatcg 608
>ref|NM_191707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3102 Score = 410 bits (207), Expect = e-111 Identities = 327/367 (89%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 175 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 234 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 ||||| || || |||||||| | |||||||| |||||||| |||||||||||||||||| Sbjct: 235 gccacgccggcggagcaggcggcgatggcgtcggagtgcgggttcaacaccctcgacgcg 294 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| | ||||| ||| |||| ||| Sbjct: 295 ctcatcgacgccaccgtcccggccgccatccgcgcgccgacgatgcacttctccgggaag 354 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || || |||||||| |||||| | ||||||||| || ||| || ||||| Sbjct: 355 ttcgacgccgggtttaccgagtcccagatgattgaccacatgcagcgcctggcggccatg 414 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 415 aacaaggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 474 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 475 atactgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccgtaccaggcg 534 Query: 422 gagatcg 428 ||||||| Sbjct: 535 gagatcg 541
>gb|AY346327.1| Oryza sativa (japonica cultivar-group) glycine dehydrogenase P protein mRNA, complete cds Length = 3102 Score = 410 bits (207), Expect = e-111 Identities = 327/367 (89%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 175 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 234 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 ||||| || || |||||||| | |||||||| |||||||| |||||||||||||||||| Sbjct: 235 gccacgccggcggagcaggcggcgatggcgtcggagtgcgggttcaacaccctcgacgcg 294 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| | ||||| ||| |||| ||| Sbjct: 295 ctcatcgacgccaccgtcccggccgccatccgcgcgccgacgatgcacttctccgggaag 354 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || || |||||||| |||||| | ||||||||| || ||| || ||||| Sbjct: 355 ttcgacgccgggtttaccgagtcccagatgattgaccacatgcagcgcctggcggccatg 414 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 415 aacaaggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 474 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 475 atactgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccgtaccaggcg 534 Query: 422 gagatcg 428 ||||||| Sbjct: 535 gagatcg 541
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 410 bits (207), Expect = e-111 Identities = 327/367 (89%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 29553883 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 29553942 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 ||||| || || |||||||| | |||||||| |||||||| |||||||||||||||||| Sbjct: 29553943 gccacgccggcggagcaggcggcgatggcgtcggagtgcgggttcaacaccctcgacgcg 29554002 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| | ||||| ||| |||| ||| Sbjct: 29554003 ctcatcgacgccaccgtcccggccgccatccgcgcgccgacgatgcacttctccgggaag 29554062 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || || |||||||| |||||| | ||||||||| || ||| || ||||| Sbjct: 29554063 ttcgacgccgggtttaccgagtcccagatgattgaccacatgcagcgcctggcggccatg 29554122 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 29554123 aacaaggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 29554182 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 29554183 atactgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccgtaccaggcg 29554242 Query: 422 gagatcg 428 ||||||| Sbjct: 29554243 gagatcg 29554249
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 410 bits (207), Expect = e-111 Identities = 327/367 (89%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 23703 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 23762 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 ||||| || || |||||||| | |||||||| |||||||| |||||||||||||||||| Sbjct: 23763 gccacgccggcggagcaggcggcgatggcgtcggagtgcgggttcaacaccctcgacgcg 23822 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| | ||||| ||| |||| ||| Sbjct: 23823 ctcatcgacgccaccgtcccggccgccatccgcgcgccgacgatgcacttctccgggaag 23882 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || || |||||||| |||||| | ||||||||| || ||| || ||||| Sbjct: 23883 ttcgacgccgggtttaccgagtcccagatgattgaccacatgcagcgcctggcggccatg 23942 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 23943 aacaaggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 24002 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 24003 atactgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccgtaccaggcg 24062 Query: 422 gagatcg 428 ||||||| Sbjct: 24063 gagatcg 24069
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 410 bits (207), Expect = e-111 Identities = 327/367 (89%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 120157 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggaggcacaactcg 120216 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 ||||| || || |||||||| | |||||||| |||||||| |||||||||||||||||| Sbjct: 120217 gccacgccggcggagcaggcggcgatggcgtcggagtgcgggttcaacaccctcgacgcg 120276 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| | ||||| ||| |||| ||| Sbjct: 120277 ctcatcgacgccaccgtcccggccgccatccgcgcgccgacgatgcacttctccgggaag 120336 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || || |||||||| |||||| | ||||||||| || ||| || ||||| Sbjct: 120337 ttcgacgccgggtttaccgagtcccagatgattgaccacatgcagcgcctggcggccatg 120396 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 120397 aacaaggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 120456 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 120457 atactgcgcaacctcatggagaaccccgcgtggtacacgcagtacacgccgtaccaggcg 120516 Query: 422 gagatcg 428 ||||||| Sbjct: 120517 gagatcg 120523
>gb|AY495085.1| Oryza sativa (indica cultivar-group) glycine dehydrogenase P protein (GDC) mRNA, complete cds Length = 2679 Score = 355 bits (179), Expect = 8e-95 Identities = 320/367 (87%) Strand = Plus / Plus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 169 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 228 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 || || || || |||||||| | |||||||| |||||||| ||| |||| |||||||| Sbjct: 229 gcgacgccggcggagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcg 288 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| |||| ||| |||| | | Sbjct: 289 ctcatcgacgccaccgtcccggccgccatccgcgcgccggagatgcgcttctccgggagg 348 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || ||||||||||| ||||| |||| |||||| || ||||||| ||||| Sbjct: 349 ttcgacgccgggttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatg 408 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 409 aacagggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 468 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 || ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 469 atcctgcgcaacctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcg 528 Query: 422 gagatcg 428 ||||||| Sbjct: 529 gagatcg 535
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 355 bits (179), Expect = 8e-95 Identities = 320/367 (87%) Strand = Plus / Minus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 24022085 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 24022026 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 || || || || |||||||| | |||||||| |||||||| ||| |||| |||||||| Sbjct: 24022025 gcgacgccggcggagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcg 24021966 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| |||| ||| |||| | | Sbjct: 24021965 ctcatcgacgccaccgtcccggccgccatccgcgcgccggagatgcgcttctccgggagg 24021906 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || ||||||||||| ||||| |||| |||||| || ||||||| ||||| Sbjct: 24021905 ttcgacgccgggttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatg 24021846 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 24021845 aacagggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 24021786 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 || ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 24021785 atcctgcgcaacctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcg 24021726 Query: 422 gagatcg 428 ||||||| Sbjct: 24021725 gagatcg 24021719
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 355 bits (179), Expect = 8e-95 Identities = 320/367 (87%) Strand = Plus / Minus Query: 62 cggcccgtctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactcg 121 |||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 31778 cggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcg 31719 Query: 122 gccacccccgccgagcaggccgttatggcgtccgagtgcggcttcaacaccctcgacgcg 181 || || || || |||||||| | |||||||| |||||||| ||| |||| |||||||| Sbjct: 31718 gcgacgccggcggagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcg 31659 Query: 182 ctcaccgacgccaccgtcccggccgcaatccgcgcgccgcccatgcagttcaccggcaag 241 |||| ||||||||||||||||||||| |||||||||||| |||| ||| |||| | | Sbjct: 31658 ctcatcgacgccaccgtcccggccgccatccgcgcgccggagatgcgcttctccgggagg 31599 Query: 242 ttcgacgcaggcttcaccgagtcgcagatgctcgaccacatggcgcacctcgcctccatg 301 |||||||| || ||||||||||| ||||| |||| |||||| || ||||||| ||||| Sbjct: 31598 ttcgacgccgggttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatg 31539 Query: 302 aacaagacctacaagtccttcatcgggatgggctactacaacacccacatccccgccgtc 361 |||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 31538 aacagggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtg 31479 Query: 362 atactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcg 421 || ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 31478 atcctgcgcaacctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcg 31419 Query: 422 gagatcg 428 ||||||| Sbjct: 31418 gagatcg 31412
>gb|AY544772.1| Brassica napus glycine decarboxylase P-protein-like gene, partial sequence Length = 3254 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 293 gcctccatgaacaagacctacaagtccttcatcgggatgggctactacaacacccacatc 352 ||||||| ||||||| || ||||||||||||||||||||| ||||||||||| ||| | Sbjct: 2056 gcctccaagaacaaggtcttcaagtccttcatcgggatggggtactacaacacacacgtt 2115 Query: 353 cccgccgtcatactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgcct 412 ||| |||| || | |||||| || ||||||||||||| |||||||| || ||||| || Sbjct: 2116 cccaccgtgatcatccgcaacatcctggagaaccccgcctggtacactcagtacactccg 2175 Query: 413 taccaggcgga 423 ||||||||||| Sbjct: 2176 taccaggcgga 2186
>gb|AY544771.1| Moricandia nitens glycine decarboxylase P-protein gene, partial cds Length = 2966 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 313 caagtccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaa 372 ||||||||||||||||||||| ||||||||||| ||| |||| |||| || | ||||| Sbjct: 1785 caagtccttcatcgggatgggatactacaacactcacgtccctaccgtgatcatccgcaa 1844 Query: 373 cctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 | || | ||||| ||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 1845 catcctcgagaatcccgcttggtacactcagtacactccttaccaagctgagatc 1899
>ref|NM_119455.2| Arabidopsis thaliana glycine dehydrogenase (decarboxylating) AT4G33010 mRNA, complete cds Length = 3478 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 630 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 689 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 690 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 740
>gb|BT000800.1| Arabidopsis thaliana At4g33010 mRNA sequence Length = 3377 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 545 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 604 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 605 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 655
>gb|BT000446.1| Arabidopsis thaliana P-Protein - like protein (At4g33010) mRNA, complete cds Length = 3344 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 531 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 590 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 591 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 641
>gb|AY091186.1| Arabidopsis thaliana putative P-protein (At4g33010) mRNA, complete cds Length = 3145 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 448 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 507 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 508 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 558
>gb|AY063903.1| Arabidopsis thaliana putative P-Protein (At4g33010) mRNA, complete cds Length = 3420 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 598 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 657 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 658 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 708
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 152459 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 152400 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 152399 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 152349
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 61763 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 61704 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 61703 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 61653
>emb|AL035525.1|ATF4I10 Arabidopsis thaliana DNA chromosome 4, BAC clone F4I10 (ESSA project) Length = 111876 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 4999 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 4940 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 4939 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 4889
>gb|AY128922.1| Arabidopsis thaliana P-protein-like protein (At4g33010) mRNA, complete cds Length = 3153 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 448 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 507 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 508 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 558
>gb|AY065004.1| Arabidopsis thaliana AT4g33010/F26P21_130 mRNA, complete cds Length = 3429 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 630 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 689 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 690 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 740
>gb|AY042800.1| Arabidopsis thaliana P-Protein - like protein (F26P21.130) mRNA, complete cds Length = 3423 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 624 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 683 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 684 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 734
>gb|BT001132.1| Arabidopsis thaliana At4g33010/F26P21_130 mRNA, complete cds Length = 3114 Score = 69.9 bits (35), Expect = 6e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||||||||| ||||||||||| || |||| | ||||| || || ||| || Sbjct: 448 tccttcatcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatc 507 Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatc 427 |||||||| || || |||||||| |||||||| ||||| || || |||||| Sbjct: 508 atggagaatccagcttggtacactcaatacactccttatcaagctgagatc 558
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 359 gtcatactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccag 418 ||||| ||||||||| ||||||||||||| || ||||||||| |||||||| |||||| Sbjct: 254968 gtcatcctgcgcaacgtcatggagaacccggcctggtacacggcgtacacgccctaccag 254909 Query: 419 gcggagatc 427 |||||||| Sbjct: 254908 ccggagatc 254900
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 367 gcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagat 426 ||||||| || ||||||||||||||||||| ||| |||||||| |||||| ||||||| Sbjct: 4867553 gcgcaacgtcctggagaaccccgcgtggtatacggcgtacacgccgtaccagccggagat 4867494 Query: 427 c 427 | Sbjct: 4867493 c 4867493
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 tggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagatcg 428 |||||||||||| |||||||| || ||||| || |||||||||||||||| Sbjct: 2113881 tggagaaccccggctggtacacccagtacaccccctaccaggcggagatcg 2113931
>gb|DQ056143.1| Coprinellus disseminatus strain C345.1 mating-type gene locus, complete sequence, and flanking genomic region Length = 75497 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 377 atggagaaccccgcgtggtacacgcaatacacgccttaccag 418 ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 15416 atggagaacccttcatggtacacgcaatacaccccttaccag 15457
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 383 aaccccgcgtggtacacgcaatacacgccttaccaggcggagatcg 428 ||||||| |||||||| || ||||||||||||||||| ||||||| Sbjct: 252064 aaccccggctggtacacccagtacacgccttaccaggccgagatcg 252109 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccctcgacgcgctcaccgac 190 |||||||||||||||||||| Sbjct: 886172 ccctcgacgcgctcaccgac 886191
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 366 tgcgcaacctcatggagaaccccgcgtggtacac 399 |||||||||| |||||||||||||||||||||| Sbjct: 2650633 tgcgcaacctgctggagaaccccgcgtggtacac 2650666 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgacgccaccgtcccggccg 206 |||||||||||||||||||| Sbjct: 2475888 cgacgccaccgtcccggccg 2475869
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 331 gggctactacaacacccacatccccgccgtcatactgcgcaacctcatggagaaccccgc 390 ||||||||||||||| | || || | |||||| ||||||||| || | |||||||| || Sbjct: 3763639 gggctactacaacacgctcacgccgggcgtcatcctgcgcaacatcttcgagaacccggc 3763698 Query: 391 gtggtacac 399 ||||||||| Sbjct: 3763699 gtggtacac 3763707
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 359 gtcatactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccag 418 ||||| ||||||||| || |||| |||||||| |||||||| |||||||| |||||| Sbjct: 3816976 gtcatcctgcgcaacatcctggaaaaccccgcctggtacaccgcctacacgccgtaccag 3817035 Query: 419 gcgga 423 ||||| Sbjct: 3817036 gcgga 3817040
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 359 gtcatactgcgcaacctcatggagaaccccgcgtggtacacgcaatacacgccttaccag 418 ||||| ||||||||| || |||| |||||||| |||||||| |||||||| |||||| Sbjct: 3817651 gtcatcctgcgcaacatcctggaaaaccccgcctggtacaccgcctacacgccgtaccag 3817710 Query: 419 gcgga 423 ||||| Sbjct: 3817711 gcgga 3817715
>dbj|AP004486.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05B20, TM0019a, complete sequence Length = 73833 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 69 tctccgtgtcggcgctgcagcccagcgacaccttcccgcggcggcacaactc 120 |||||||| |||||| || ||||||||||| |||||| | ||||||||||| Sbjct: 9530 tctccgtggaggcgcttcaacccagcgacacgttcccgagacggcacaactc 9479 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 375 tcatggagaaccccgcgtggtacacgcaatacacgccttaccaggcggagat 426 |||||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 9227 tcatggagaatccagcttggtacacacagtacactccttaccaggctgagat 9176
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Plus Query: 365 ctgcgcaacctcatggagaaccccgcgtggtacac 399 |||||||||||| |||| |||||||| |||||||| Sbjct: 5355963 ctgcgcaacctcctggaaaaccccgcctggtacac 5355997
>gb|AE004672.1| Pseudomonas aeruginosa PAO1, section 233 of 529 of the complete genome Length = 10855 Score = 46.1 bits (23), Expect = 0.093 Identities = 68/83 (81%) Strand = Plus / Minus Query: 317 tccttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctc 376 ||||||||||| ||||||||||||| ||||| ||| || || |||||||||||| Sbjct: 2723 tccttcatcggccagggctactacaactgccacaccccggcaccgatcctgcgcaacctc 2664 Query: 377 atggagaaccccgcgtggtacac 399 |||||||||| || |||||||| Sbjct: 2663 ctggagaacccggcctggtacac 2641
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Plus Query: 365 ctgcgcaacctcatggagaaccccgcgtggtacac 399 ||||||||| || ||||||||||||| |||||||| Sbjct: 1693934 ctgcgcaacatcctggagaaccccgcctggtacac 1693968
>ref|NM_128167.2| Arabidopsis thaliana glycine dehydrogenase (decarboxylating) AT2G26080 mRNA, complete cds Length = 3487 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 agcccagcgacaccttcccgcggcggcacaactc 120 |||| |||||||| |||||||| ||||||||||| Sbjct: 278 agccaagcgacactttcccgcgccggcacaactc 311
>ref|XM_367016.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG03092.4) partial mRNA Length = 3255 Score = 44.1 bits (22), Expect = 0.37 Identities = 82/102 (80%) Strand = Plus / Plus Query: 319 cttcatcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctcat 378 ||||||||| | ||||||||||||||| | | ||||| ||||| ||||||| || | Sbjct: 492 cttcatcggaaagggctactacaacactctgacccccgaggtcatcaagcgcaacatcct 551 Query: 379 ggagaaccccgcgtggtacacgcaatacacgccttaccaggc 420 |||| |||||| |||||||| ||||||||||||||||| Sbjct: 552 cgagagccccgcctggtacaccagctacacgccttaccaggc 593
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.37 Identities = 85/106 (80%) Strand = Plus / Minus Query: 323 atcgggatgggctactacaacacccacatccccgccgtcatactgcgcaacctcatggag 382 ||||| |||||||||||| |||||| | || || || || ||||||||| ||||||| Sbjct: 3629027 atcggcatgggctactacggcacccatacgccggcggtgatcctgcgcaacgtcatggaa 3628968 Query: 383 aaccccgcgtggtacacgcaatacacgccttaccaggcggagatcg 428 ||||| | |||||||| |||||||| |||||||| ||||||| Sbjct: 3628967 aacccaggctggtacaccgcctacacgccgtaccaggccgagatcg 3628922
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 agcccagcgacaccttcccgcggcggcacaactc 120 |||| |||||||| |||||||| ||||||||||| Sbjct: 30944 agccaagcgacactttcccgcgccggcacaactc 30977
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcgacgcgctcaccgacgcc 193 ||||||||||||||||||||| Sbjct: 3668584 ctcgacgcgctcaccgacgcc 3668564
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcgacgcgctcaccgacgcc 193 ||||||||||||||||||||| Sbjct: 1810860 ctcgacgcgctcaccgacgcc 1810840
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 331 gggctactacaacacccacatccccgccgtcatactgcgcaacctcatggagaaccccgc 390 |||||||||| ||||||||| ||| || || || ||||||||| | | || ||||| || Sbjct: 3712820 gggctactacgacacccacaccccggcggtgatcctgcgcaacgtgctcgaaaacccggc 3712761 Query: 391 gtggtacac 399 ||||||||| Sbjct: 3712760 gtggtacac 3712752
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.7 Identities = 56/68 (82%) Strand = Plus / Minus Query: 332 ggctactacaacacccacatccccgccgtcatactgcgcaacctcatggagaaccccgcg 391 ||||||||| ||||||||| ||| || || || ||||||||| | | || ||||| ||| Sbjct: 3098830 ggctactacgacacccacaccccggcggtgatcctgcgcaacgtgctcgaaaacccggcg 3098771 Query: 392 tggtacac 399 |||||||| Sbjct: 3098770 tggtacac 3098763
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 332 ggctactacaacacccacatccccgccgtcatactgcgcaacctcatggagaaccccgcg 391 ||||||||| ||||||||| ||| || || || ||||||||| | | || ||||| ||| Sbjct: 135254 ggctactacgacacccacaccccggcggtgatcctgcgcaacgtgctcgaaaacccggcg 135313 Query: 392 tggtacac 399 |||||||| Sbjct: 135314 tggtacac 135321
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgacgcgctcaccgacgcca 194 |||||||||||||||||||| Sbjct: 977533 cgacgcgctcaccgacgcca 977552
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.7 Identities = 56/68 (82%) Strand = Plus / Plus Query: 332 ggctactacaacacccacatccccgccgtcatactgcgcaacctcatggagaaccccgcg 391 ||||||||| ||||||||| ||| || || || ||||||||| | | || ||||| ||| Sbjct: 3986873 ggctactacgacacccacaccccggcggtgatcctgcgcaacgtgctcgaaaacccggcg 3986932 Query: 392 tggtacac 399 |||||||| Sbjct: 3986933 tggtacac 3986940
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cctcgacgcgctcaccgacg 191 |||||||||||||||||||| Sbjct: 159223 cctcgacgcgctcaccgacg 159242
>emb|AJ131717.1|PST131717 Pseudomonas stutzeri nrdD (partial) and dnrS genes Length = 1129 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ggcggcacaactcggccacc 127 |||||||||||||||||||| Sbjct: 442 ggcggcacaactcggccacc 423
>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence Length = 203200 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ctgcagcccagcgacaccttcccg 106 ||||||| |||||||||||||||| Sbjct: 165699 ctgcagcgcagcgacaccttcccg 165722
>gb|AE005171.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 32 of 32 of the complete genome Length = 13745 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccctcgacgcgctcaccgac 190 |||||||||||||||||||| Sbjct: 2654 ccctcgacgcgctcaccgac 2635
>gb|AE005143.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 4 of 32 of the complete genome Length = 12163 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccctcgacgcgctcaccgac 190 |||||||||||||||||||| Sbjct: 10515 ccctcgacgcgctcaccgac 10534
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gggctactacaacacccaca 350 |||||||||||||||||||| Sbjct: 1129297 gggctactacaacacccaca 1129278
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccctcgacgcgctcaccgac 190 |||||||||||||||||||| Sbjct: 180255 ccctcgacgcgctcaccgac 180236 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccctcgacgcgctcaccgac 190 |||||||||||||||||||| Sbjct: 43134 ccctcgacgcgctcaccgac 43153 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,119,472 Number of Sequences: 3902068 Number of extensions: 2119472 Number of successful extensions: 42856 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 41103 Number of HSP's gapped (non-prelim): 1779 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
