ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.091
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.091
3gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 0.36
4emb|AL138815.6| Human DNA sequence from clone RP11-141F12 on chr... 42 0.36
5gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 42 0.36
6emb|AM181680.1| Drosophila tristis promoter region (y gene) 42 0.36
7gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, co... 40 1.4
8gb|AC079365.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 1.4
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.4
10gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 1.4
11gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosom... 40 1.4
12gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, r... 40 1.4
13gb|AY973543.1| Hyaloperonospora parasitica isolate Emoy2 clone B... 40 1.4
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
16dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
17emb|BX649056.1|HSM809207 Homo sapiens mRNA; cDNA DKFZp779E1025 (... 40 1.4
18gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 1.4
19emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chr... 40 1.4
20gb|AC153076.3| Aotus nancymaae clone CH258-449A9, complete sequence 38 5.6
21ref|XM_507562.1| PREDICTED Oryza sativa (japonica cultivar-group... 38 5.6
22ref|XM_479817.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.6
23ref|XM_507101.2| PREDICTED Oryza sativa (japonica cultivar-group... 38 5.6
24gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 38 5.6
25gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 38 5.6
26gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P... 38 5.6
27gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, comp... 38 5.6
28gb|AC167019.4| Mus musculus BAC clone RP23-262K24 from chromosom... 38 5.6
29gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 5.6
30gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, com... 38 5.6
31gb|AC131721.4| Mus musculus BAC clone RP23-142L24 from chromosom... 38 5.6
32gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, compl... 38 5.6
33gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, comp... 38 5.6
34gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome... 38 5.6
35gb|AC093673.4| Homo sapiens BAC clone RP11-563K23 from 7, comple... 38 5.6
36gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's... 38 5.6
37gb|AC140113.3| Homo sapiens PAC clone RP1-85D24 from Y, complete... 38 5.6
38gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome... 38 5.6
39gb|AC131712.3| Mus musculus BAC clone RP23-193A5 from 17, comple... 38 5.6
40gb|AC145982.2| Pan troglodytes BAC clone RP43-13J3 from 7, compl... 38 5.6
41gb|BC050543.1| Homo sapiens KIAA0773 gene product, mRNA (cDNA cl... 38 5.6
42gb|BC045611.1| Homo sapiens KIAA0773 gene product, mRNA (cDNA cl... 38 5.6
43ref|NM_001031690.1| Homo sapiens KIAA0773 gene product (KIAA0773... 38 5.6
44gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p... 38 5.6
45gb|AC167554.9| Mus musculus chromosome 15, clone RP24-281M24, co... 38 5.6
46gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosom... 38 5.6
47emb|BX883048.1| Rattus norvegicus chromosome 20, major histocomp... 38 5.6
48gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosom... 38 5.6
49emb|CR589927.1| Human DNA sequence from clone WI2-620K10 on chro... 38 5.6
50gb|AC023750.3| Drosophila melanogaster 3L BAC RP98-15C16 (Roswel... 38 5.6
51dbj|AK124557.1| Homo sapiens cDNA FLJ42566 fis, clone BRACE3007480 38 5.6
52gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 38 5.6
53dbj|AK043311.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 38 5.6
54gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, c... 38 5.6
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
57gb|AC153983.7| Mus musculus 6 BAC RP24-479J14 (Roswell Park Canc... 38 5.6
58gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, comple... 38 5.6
59gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete se... 38 5.6
60ref|NM_014690.2| Homo sapiens KIAA0773 gene product (KIAA0773), ... 38 5.6
61emb|BX640585.2| Pig DNA sequence from clone XX-279G2, complete s... 38 5.6
62dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
63dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
64dbj|AB018316.1| Homo sapiens mRNA for KIAA0773 protein, partial cds 38 5.6
65dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.6
66gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, comple... 38 5.6
67dbj|AK068273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.6
68dbj|AK067636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.6
69dbj|AK060602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.6
70gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79... 38 5.6
71gb|AF063231.1|AF063231 Mus musculus cytoplasmic dynein intermedi... 38 5.6
72ref|NM_010064.1| Mus musculus dynein cytoplasmic 1 intermediate ... 38 5.6
73emb|AL832579.2|HSM803888 Homo sapiens mRNA; cDNA DKFZp451F1416 (... 38 5.6
74gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, co... 38 5.6
75gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.6
76emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 38 5.6
77emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 38 5.6
78emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, B... 38 5.6
79gb|AF005047.1|AF005047 Arabidopsis thaliana transport inhibitor ... 38 5.6
80emb|AL646006.17| Mouse DNA sequence from clone RP23-168C23 on ch... 38 5.6 
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0014C03, complete sequence
          Length = 143739

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 41    gtggagtggagtggagggagga 62
             ||||||||||||||||||||||
Sbjct: 26153 gtggagtggagtggagggagga 26174
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 41       gtggagtggagtggagggagga 62
                ||||||||||||||||||||||
Sbjct: 19013510 gtggagtggagtggagggagga 19013531
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>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete
             sequence
          Length = 190328

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aaacacggggaaggagaagga 28
             |||||||||||||||||||||
Sbjct: 15009 aaacacggggaaggagaagga 15029
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>emb|AL138815.6| Human DNA sequence from clone RP11-141F12 on chromosome 13 Contains part
              of the ATP8A2 gene for ATPase, aminophospholipid
              transporter-like, Class I, type 8A, member 2 (ML-1 protein
              (IB, ATP, ML-1, ATPIB, DKFZP434B1913)), a novel pseudogene
              and a CpG island, complete sequence
          Length = 160210

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     ggtggagtggagtggagggag 60
              |||||||||||||||||||||
Sbjct: 114572 ggtggagtggagtggagggag 114592
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>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      aaacacggggaaggagaagga 28
              |||||||||||||||||||||
Sbjct: 100996 aaacacggggaaggagaagga 100976
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>emb|AM181680.1| Drosophila tristis promoter region (y gene)
          Length = 5488

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   gtggtggagtggagtggaggg 58
            |||||||||||||||||||||
Sbjct: 4410 gtggtggagtggagtggaggg 4390
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>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence
          Length = 189619

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     ggagggaggaagaccagtga 72
              ||||||||||||||||||||
Sbjct: 153213 ggagggaggaagaccagtga 153232
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>gb|AC079365.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-172N5, complete
              sequence
          Length = 191310

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     aggaagaccagtgaagacca 78
              ||||||||||||||||||||
Sbjct: 164360 aggaagaccagtgaagacca 164379
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 40       ggtggagtggagtggaggga 59
                ||||||||||||||||||||
Sbjct: 17029876 ggtggagtggagtggaggga 17029895
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
             sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggtggagtggagtggaggga 59
             ||||||||||||||||||||
Sbjct: 60622 ggtggagtggagtggaggga 60641
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>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete
             sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gtggagtggagggaggaaga 65
             ||||||||||||||||||||
Sbjct: 72887 gtggagtggagggaggaaga 72906
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>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone
             BACR16P12, complete sequence
          Length = 171598

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ggtggagtggagtggaggga 59
             ||||||||||||||||||||
Sbjct: 72114 ggtggagtggagtggaggga 72095
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>gb|AY973543.1| Hyaloperonospora parasitica isolate Emoy2 clone BAC 9B13 and BAC 4C4,
            complete sequence
          Length = 120624

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   gtggagtggagtggagggag 60
            ||||||||||||||||||||
Sbjct: 4281 gtggagtggagtggagggag 4300
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 40       ggtggagtggagtggaggga 59
                ||||||||||||||||||||
Sbjct: 17023445 ggtggagtggagtggaggga 17023464
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       gtggagtggagggaggaaga 65
                ||||||||||||||||||||
Sbjct: 42078875 gtggagtggagggaggaaga 42078856
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>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1139B11
          Length = 136548

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gtggagtggagggaggaaga 65
             ||||||||||||||||||||
Sbjct: 65680 gtggagtggagggaggaaga 65661
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>emb|BX649056.1|HSM809207 Homo sapiens mRNA; cDNA DKFZp779E1025 (from clone DKFZp779E1025)
          Length = 3002

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 52 tggagggaggaagaccagtgaaga 75
          ||||||||| ||||||||||||||
Sbjct: 72 tggagggagaaagaccagtgaaga 95
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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     ggtggagtggagtggaggga 59
              ||||||||||||||||||||
Sbjct: 221486 ggtggagtggagtggaggga 221467
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>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete
             sequence
          Length = 186233

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ggagggaggaagaccagtga 72
             ||||||||||||||||||||
Sbjct: 13854 ggagggaggaagaccagtga 13835
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>gb|AC153076.3| Aotus nancymaae clone CH258-449A9, complete sequence
          Length = 184072

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    gtggtggagtggagtggag 56
             |||||||||||||||||||
Sbjct: 73256 gtggtggagtggagtggag 73238
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>ref|XM_507562.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.27
           mRNA
          Length = 943

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 823 gtggtggagtggagtggag 841
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>ref|XM_479817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 878

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 753 gtggtggagtggagtggag 771
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>ref|XM_507101.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.27
           mRNA
          Length = 907

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 753 gtggtggagtggagtggag 771
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 40      ggtggagtggagtggagggagga 62
               ||||||| |||||||||||||||
Sbjct: 1524621 ggtggaggggagtggagggagga 1524643
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     gtggagtggagtggaggga 59
              |||||||||||||||||||
Sbjct: 497903 gtggagtggagtggaggga 497885
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>gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P12, complete sequence
          Length = 165197

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    gtggagtggagtggaggga 59
             |||||||||||||||||||
Sbjct: 91949 gtggagtggagtggaggga 91931
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>gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, complete sequence
          Length = 165330

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    gtggagtggagggaggaag 64
             |||||||||||||||||||
Sbjct: 19039 gtggagtggagggaggaag 19021
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>gb|AC167019.4| Mus musculus BAC clone RP23-262K24 from chromosome 15, complete
             sequence
          Length = 207785

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    aggaagaccagtgaagacc 77
             |||||||||||||||||||
Sbjct: 53749 aggaagaccagtgaagacc 53731
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>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete
             sequence
          Length = 152776

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    gaagaccagtgaagaccac 79
             |||||||||||||||||||
Sbjct: 33567 gaagaccagtgaagaccac 33585
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>gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, complete sequence
          Length = 133354

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    gggaaggagaaggaggtcc 33
             |||||||||||||||||||
Sbjct: 13987 gggaaggagaaggaggtcc 14005
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>gb|AC131721.4| Mus musculus BAC clone RP23-142L24 from chromosome 15, complete sequence
          Length = 230892

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     gggaaggagaaggaggtcc 33
              |||||||||||||||||||
Sbjct: 195842 gggaaggagaaggaggtcc 195860
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>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence
          Length = 225556

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     gtggtggagtggagtggag 56
              |||||||||||||||||||
Sbjct: 182272 gtggtggagtggagtggag 182290
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>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence
          Length = 187677

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    gtggagtggagggaggaag 64
             |||||||||||||||||||
Sbjct: 59818 gtggagtggagggaggaag 59800
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>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence
          Length = 181742

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     aggaagaccagtgaagacc 77
              |||||||||||||||||||
Sbjct: 148551 aggaagaccagtgaagacc 148533
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>gb|AC093673.4| Homo sapiens BAC clone RP11-563K23 from 7, complete sequence
          Length = 33449

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 6336 gagtggagtggagggagga 6318
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>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 232962

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    ggagtggagggaggaagac 66
             |||||||||||||||||||
Sbjct: 82685 ggagtggagggaggaagac 82703
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>gb|AC140113.3| Homo sapiens PAC clone RP1-85D24 from Y, complete sequence
          Length = 155655

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     gtggtggagtggagtggag 56
              |||||||||||||||||||
Sbjct: 153145 gtggtggagtggagtggag 153163
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>gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome 7, complete sequence
          Length = 222122

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     ggaggaagaccagtgaaga 75
              |||||||||||||||||||
Sbjct: 127814 ggaggaagaccagtgaaga 127832
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>gb|AC131712.3| Mus musculus BAC clone RP23-193A5 from 17, complete sequence
          Length = 218758

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     gtggagggaggaagaccag 69
              |||||||||||||||||||
Sbjct: 138580 gtggagggaggaagaccag 138562
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>gb|AC145982.2| Pan troglodytes BAC clone RP43-13J3 from 7, complete sequence
          Length = 141213

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     gagtggagtggagggagga 62
              |||||||||||||||||||
Sbjct: 116015 gagtggagtggagggagga 115997
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>gb|BC050543.1| Homo sapiens KIAA0773 gene product, mRNA (cDNA clone MGC:57625
            IMAGE:5768309), complete cds
          Length = 3850

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 2122 gagtggagtggagggagga 2140
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>gb|BC045611.1| Homo sapiens KIAA0773 gene product, mRNA (cDNA clone MGC:33745
            IMAGE:5300056), complete cds
          Length = 4395

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 2256 gagtggagtggagggagga 2274
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>ref|NM_001031690.1| Homo sapiens KIAA0773 gene product (KIAA0773), mRNA
          Length = 4395

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 2256 gagtggagtggagggagga 2274
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>gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p11-q21.1, complete
             sequence
          Length = 211345

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    gtggagtggagtggaggga 59
             |||||||||||||||||||
Sbjct: 85226 gtggagtggagtggaggga 85244
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>gb|AC167554.9| Mus musculus chromosome 15, clone RP24-281M24, complete sequence
          Length = 166875

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    gggaaggagaaggaggtcc 33
             |||||||||||||||||||
Sbjct: 17457 gggaaggagaaggaggtcc 17439
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>gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosome 17, complete
             sequence
          Length = 182569

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    gtggagggaggaagaccag 69
             |||||||||||||||||||
Sbjct: 11308 gtggagggaggaagaccag 11290
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>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 7/11
          Length = 349943

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     ccgtggtggagtggagtgg 54
              |||||||||||||||||||
Sbjct: 279054 ccgtggtggagtggagtgg 279072
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>gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosome 17, complete sequence
          Length = 202092

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     ggaagaccagtgaagacca 78
              |||||||||||||||||||
Sbjct: 122356 ggaagaccagtgaagacca 122338
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>emb|CR589927.1| Human DNA sequence from clone WI2-620K10 on chromosome 1, complete
             sequence
          Length = 36909

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    ggtggagtggagtggaggg 58
             |||||||||||||||||||
Sbjct: 34902 ggtggagtggagtggaggg 34884
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>gb|AC023750.3| Drosophila melanogaster 3L BAC RP98-15C16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 185061

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    tggtggagtggagtggagg 57
             |||||||||||||||||||
Sbjct: 80694 tggtggagtggagtggagg 80676
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>dbj|AK124557.1| Homo sapiens cDNA FLJ42566 fis, clone BRACE3007480
          Length = 4321

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 2199 gagtggagtggagggagga 2217
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 66      ccagtgaagaccacgcaag 84
               |||||||||||||||||||
Sbjct: 3264194 ccagtgaagaccacgcaag 3264176
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>dbj|AK043311.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730083G08
           product:unclassifiable, full insert sequence
          Length = 689

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 61  gaagaccagtgaagaccac 79
           |||||||||||||||||||
Sbjct: 253 gaagaccagtgaagaccac 271
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>gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, complete sequence
          Length = 194163

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     gggaaggagaaggaggtcc 33
              |||||||||||||||||||
Sbjct: 145939 gggaaggagaaggaggtcc 145921
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      ggtggagtggagtggaggg 58
               |||||||||||||||||||
Sbjct: 1731209 ggtggagtggagtggaggg 1731191
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 38       gtggtggagtggagtggag 56
                |||||||||||||||||||
Sbjct: 28335871 gtggtggagtggagtggag 28335889



 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      gtggtggagtggagtggag 56
               |||||||||||||||||||
Sbjct: 1083566 gtggtggagtggagtggag 1083548
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>gb|AC153983.7| Mus musculus 6 BAC RP24-479J14 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 178303

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    gaagaccagtgaagaccac 79
             |||||||||||||||||||
Sbjct: 90545 gaagaccagtgaagaccac 90527
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>gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, complete sequence
          Length = 104547

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    agtggagggaggaagacca 68
             |||||||||||||||||||
Sbjct: 33883 agtggagggaggaagacca 33865
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>gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete sequence
          Length = 185109

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 40     ggtggagtggagtggagggagga 62
              ||||||| |||||||||||||||
Sbjct: 164305 ggtggaggggagtggagggagga 164327
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>ref|NM_014690.2| Homo sapiens KIAA0773 gene product (KIAA0773), mRNA
          Length = 5862

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 3736 gagtggagtggagggagga 3754
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>emb|BX640585.2| Pig DNA sequence from clone XX-279G2, complete sequence
          Length = 96095

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    ggtggagtggagtggaggg 58
             |||||||||||||||||||
Sbjct: 62602 ggtggagtggagtggaggg 62584
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gtggtggagtggagtggag 56
             |||||||||||||||||||
Sbjct: 64677 gtggtggagtggagtggag 64695
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>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0705A05
          Length = 143765

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     gtggtggagtggagtggag 56
              |||||||||||||||||||
Sbjct: 127686 gtggtggagtggagtggag 127704
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>dbj|AB018316.1| Homo sapiens mRNA for KIAA0773 protein, partial cds
          Length = 4164

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 2042 gagtggagtggagggagga 2060
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_B05
          Length = 144799

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     gtggtggagtggagtggag 56
              |||||||||||||||||||
Sbjct: 112093 gtggtggagtggagtggag 112075
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>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence
          Length = 214433

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 60     ggaagaccagtgaagacca 78
              |||||||||||||||||||
Sbjct: 180988 ggaagaccagtgaagacca 181006
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>dbj|AK068273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136L01, full
           insert sequence
          Length = 878

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 753 gtggtggagtggagtggag 771
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>dbj|AK067636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109P06, full
           insert sequence
          Length = 907

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 753 gtggtggagtggagtggag 771
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>dbj|AK060602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H10, full
           insert sequence
          Length = 943

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtggtggagtggagtggag 56
           |||||||||||||||||||
Sbjct: 823 gtggtggagtggagtggag 841
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>gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79 of 83 of the complete
              sequence
          Length = 303370

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     tggtggagtggagtggagg 57
              |||||||||||||||||||
Sbjct: 112845 tggtggagtggagtggagg 112827
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>gb|AF063231.1|AF063231 Mus musculus cytoplasmic dynein intermediate chain 2 (Dncic2)
          mRNA, complete cds
          Length = 2458

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 38 gtggtggagtggagtggag 56
          |||||||||||||||||||
Sbjct: 61 gtggtggagtggagtggag 43
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>ref|NM_010064.1| Mus musculus dynein cytoplasmic 1 intermediate chain 2 (Dync1i2),
          mRNA
          Length = 2458

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 38 gtggtggagtggagtggag 56
          |||||||||||||||||||
Sbjct: 61 gtggtggagtggagtggag 43
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>emb|AL832579.2|HSM803888 Homo sapiens mRNA; cDNA DKFZp451F1416 (from clone DKFZp451F1416);
            complete cds
          Length = 5862

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   gagtggagtggagggagga 62
            |||||||||||||||||||
Sbjct: 3736 gagtggagtggagggagga 3754
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>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence
          Length = 210509

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     gagtggagtggagggagga 62
              |||||||||||||||||||
Sbjct: 128282 gagtggagtggagggagga 128300
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      ggtggagtggagtggaggg 58
               |||||||||||||||||||
Sbjct: 1731185 ggtggagtggagtggaggg 1731167
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>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132026

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     ggtggagtggagtggaggg 58
              |||||||||||||||||||
Sbjct: 109275 ggtggagtggagtggaggg 109293
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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104307

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    ggtggagtggagtggaggg 58
             |||||||||||||||||||
Sbjct: 35712 ggtggagtggagtggaggg 35730
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>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
          Length = 83122

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    ggggaaggagaaggaggtc 32
             |||||||||||||||||||
Sbjct: 19284 ggggaaggagaaggaggtc 19302
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>gb|AF005047.1|AF005047 Arabidopsis thaliana transport inhibitor response 1 (TIR1) gene,
          complete cds
          Length = 3530

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 14 ggggaaggagaaggaggtc 32
          |||||||||||||||||||
Sbjct: 42 ggggaaggagaaggaggtc 24
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>emb|AL646006.17| Mouse DNA sequence from clone RP23-168C23 on chromosome 4, complete
             sequence
          Length = 151509

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    ggtggagtggagtggaggg 58
             |||||||||||||||||||
Sbjct: 13646 ggtggagtggagtggaggg 13628


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,177,230
Number of Sequences: 3902068
Number of extensions: 1177230
Number of successful extensions: 158131
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 157146
Number of HSP's gapped (non-prelim): 985
length of query: 121
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 100
effective length of database: 17,151,101,840
effective search space: 1715110184000
effective search space used: 1715110184000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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