ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl17c01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 202 bits (514), Expect = 3e-52 Identities = 101/102 (99%), Positives = 101/102 (99%) Frame = +1 Query: 112 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISST 291 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLND GATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 292 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 102
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 173 bits (439), Expect = 1e-43 Identities = 83/102 (81%), Positives = 96/102 (94%), Gaps = 1/102 (0%) Frame = +1 Query: 115 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTA 294 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLND GAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 295 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGESKFGLTFDWE 417 VD +NG RGKVGAEA LEQW+T SLPSLTTGES+FG+TFDW+ Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWD 102
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 158 bits (400), Expect = 4e-39 Identities = 75/101 (74%), Positives = 90/101 (89%) Frame = +1 Query: 115 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTA 294 +LGG+I LTG NK+ARLKG++VLMRKN LD+ND GAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 295 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WE Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWE 100
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 107 bits (268), Expect = 9e-24 Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Frame = +1 Query: 115 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLIS 285 + G L D LTG ++KGTVVLM+KNVLD ND A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 286 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 S D +NG +GK+G A LE W+T++ SLT GES F +TFD+E Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYE 104
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 105 bits (261), Expect = 6e-23 Identities = 51/101 (50%), Positives = 71/101 (70%) Frame = +1 Query: 115 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTA 294 +LGGL D LTG N + ++KG VLM + +LD D A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 295 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWE 100
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 96.7 bits (239), Expect = 2e-20 Identities = 47/102 (46%), Positives = 71/102 (69%) Frame = +1 Query: 112 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISST 291 M LGG++D + G + ++KG V+LM+KNVLD ++GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 292 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 +V+ D G GK+ A LE W+T + +T GES F +TFDW+ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWD 100
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 93.6 bits (231), Expect = 2e-19 Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 6/108 (5%) Frame = +1 Query: 112 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDLGATIIDGIGEFLG--KGVTC 273 M + G D LTG NK A R++GT VL++K+VL L D A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 274 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 +L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD 108
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 86.3 bits (212), Expect = 3e-17 Identities = 48/100 (48%), Positives = 64/100 (64%) Frame = +1 Query: 115 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTA 294 L+GGLI G + S ++KGTVV+M+KN LD DL ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 295 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDW 414 D NG +GK A LE ++ +L L GE+ FG+TFDW Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDW 101
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 79.0 bits (193), Expect = 4e-15 Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 18/107 (16%) Frame = +1 Query: 151 NKSARLKGTVVLMRKNVLDLN--------------DLGATII----DGIGEFLGKGVTCQ 276 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 277 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 LIS+T D + G+GKVG + LE + SLP+L GES F + F+W+ Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWD 114
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 76.6 bits (187), Expect = 2e-14 Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 13/114 (11%) Frame = +1 Query: 115 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DLGATIIDGIGEFL 255 +LGGL+ ++ ++KGTVVLMRKNVL +N DL + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 256 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L G+S F + F+W+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD 106
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 75.9 bits (185), Expect = 4e-14 Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 13/102 (12%) Frame = +1 Query: 151 NKSARLKGTVVLMRKNVLDLN-------------DLGATIIDGIGEFLGKGVTCQLISST 291 N+ ++KGTVVLMRKNVLD+N D+ + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 292 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 D G+GK+G LE ++SLP+L G+S F + F+W+ Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD 109
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 75.5 bits (184), Expect = 5e-14 Identities = 41/85 (48%), Positives = 57/85 (67%) Frame = +1 Query: 163 RLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAE 342 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 343 LEQWVTSLPSLTTGESKFGLTFDWE 417 LE TSLP+L GES F + F+W+ Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD 88
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 75.1 bits (183), Expect = 6e-14 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +1 Query: 145 GANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 324 G + S ++KGTVV+M KNVLD DL ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 325 VGAEAELEQWVTSLPSLTTG-ESKFGLTFDW 414 A LE + +L LT G E+ FG+TFDW Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDW 102
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 70.1 bits (170), Expect = 2e-12 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 18/103 (17%) Frame = +1 Query: 163 RLKGTVVLMRKNVLDLNDLG------------------ATIIDGIGEFLGKGVTCQLISS 288 ++KGTVVLMRKNVLD N + + +D + FLG+ V QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 289 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 T + G+GKVG + LE + SLP+L GES F + F+W+ Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD 118
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 69.7 bits (169), Expect = 3e-12 Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 20/108 (18%) Frame = +1 Query: 154 KSARLKGTVVLMRKNVLDLNDLGA--------------------TIIDGIGEFLGKGVTC 273 + +LKGTV+LM+KNVLD+N L A +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 274 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD 113
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 65.9 bits (159), Expect = 4e-11 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 22/111 (19%) Frame = +1 Query: 151 NKSARLKGTVVLMRKNVLDLNDL------------------GATIIDGIGE----FLGKG 264 +K ++KGTVVLM KNVLD N + G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 265 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWD 114
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 62.8 bits (151), Expect = 3e-10 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 13/101 (12%) Frame = +1 Query: 154 KSARLKGTVVLMRKNVLDLNDL---GATIIDGIGEFLGKGV----------TCQLISSTA 294 K ++KGT+V+M+KNVLD+N + G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 295 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 D GG+GK+G L +T LP+L GE + + F+W+ Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWD 102
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 60.8 bits (146), Expect = 1e-09 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 22/111 (19%) Frame = +1 Query: 151 NKSARLKGTVVLMRKNVLDLNDLGAT----------------------IIDGIGEFLGKG 264 N+ ++KGTVVLM KNV D N+ +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 265 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWE 417 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ Sbjct: 66 IAIQLISATKTD--GLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD 114
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 32.7 bits (73), Expect = 0.36 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 3/97 (3%) Frame = -1 Query: 416 SQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPRNS 246 +QS RP +PV + + + T P PL+ ++ + S V +P+N Sbjct: 1647 AQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNI 1706 Query: 245 PMPSMMVAPRSLRSSTFLRMSTTVPLSRALLFAPVRV 135 S V P +L SS + T PL + PV++ Sbjct: 1707 KFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 32.3 bits (72), Expect = 0.47 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 401 RPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMP--SMM 228 R LDS V+ +V C +S + PRP ++W +++ LPR +P+ S++ Sbjct: 404 RGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTPLESGSLL 459 Query: 227 VAP 219 ++P Sbjct: 460 ISP 462
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -1 Query: 407 KVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLS 303 +++P + +PVV+ ++ SSS+SAP P PP S Sbjct: 552 EIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPS 586
>SYA_PORGI (Q7MV54) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 30.0 bits (66), Expect = 2.3 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 17/94 (18%) Frame = +1 Query: 166 LKGTVVLMRKNVLDLNDLGATIIDGIGEF-------LGKGVTCQLISSTAVDQDNGG--- 315 L+ + L+ K + D G+T++DG+ F +T ++S + D G Sbjct: 375 LETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDT 434 Query: 316 -------RGKVGAEAELEQWVTSLPSLTTGESKF 396 R + A E WV L GESKF Sbjct: 435 EMQKQKERARNAAAVEAGDWVV----LREGESKF 464
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 419 TSQSK-VRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 243 TSQ+K + P+ P +S + + A APT P PP T + + + P P Sbjct: 91 TSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEP 150 Query: 242 MPS 234 +P+ Sbjct: 151 VPA 153
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 29.6 bits (65), Expect = 3.0 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = -1 Query: 335 SAPTFPRPPLSWS-TAVELISWQVTPLPRNSPMPSMMVAPRSLRSS 201 +A T P PPLS + ++V ++S PL +NS +PS++ S R+S Sbjct: 960 AASTMPPPPLSRAPSSVSMVS--PPPLHKNSRVPSLVATSESPRAS 1003
>CH60_EHRSE (O32606) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (55 kDa| major antigen) Length = 548 Score = 29.6 bits (65), Expect = 3.0 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = +1 Query: 145 GANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLG--KGVTCQLISSTAVDQDNGGR 318 G +S L+ +L L +DLG T+ E LG K + S+T VD GG Sbjct: 282 GDRRSEMLEDIRILTGAKTLVSDDLGVTVESLTVEDLGTAKSIIISKDSTTIVD---GGG 338 Query: 319 GKVGAEAELEQWVTSLPSLTTGESK 393 K EA ++Q T + T+ K Sbjct: 339 EKTAIEARVKQIKTQIDKTTSDYDK 363
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -1 Query: 410 SKVRPNL-----DSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 246 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 245 PMP--SMMVAPRSL 210 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 29.3 bits (64), Expect = 3.9 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 3/97 (3%) Frame = -1 Query: 416 SQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPRNS 246 +QS RP +PV + + + T P PL+ ++ + S V +P+N Sbjct: 1650 AQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQNI 1709 Query: 245 PMPSMMVAPRSLRSSTFLRMSTTVPLSRALLFAPVRV 135 S V P SS + T PL + PV++ Sbjct: 1710 KFSSAPVTPNVPSSSPAPNIQTGRPLVLSSRATPVQL 1746
>SCA4_RICAU (Q9AJ64) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 991 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +1 Query: 94 EEAKNKMLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDL-GATIIDGIGEFLGKGVT 270 ++ + + G+ DT+ +N S + KGT+++ + ++ ++L A +G L KGV Sbjct: 526 DDTSRAVAIDGITDTVIKSNLSTKDKGTMLIAVGDKVNASELSNAEKQQLLGSVLKKGVE 585 Query: 271 CQLIS 285 Q++S Sbjct: 586 TQVLS 590
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 136 TLTGANKSARLKGTVVLMRKNVLDLNDLGATI 231 TL G K R +GTV+ + + +L D GAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.5 bits (62), Expect = 6.7 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Frame = -1 Query: 353 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPRSLR 207 HC+S SAP++ P S S TA+ L SW+ P P+ + + P + R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 206 SSTFLR 189 TFLR Sbjct: 63 PETFLR 68
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +3 Query: 75 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 188 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 387 LPRRQRRQARHPLLQLRLRAH 325 LPR + QARHP + LRL H Sbjct: 110 LPRLEDFQARHPFIDLRLSTH 130
>CH60_EHRRI (P48214) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (55 kDa| major antigen) Length = 548 Score = 28.5 bits (62), Expect = 6.7 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = +1 Query: 145 GANKSARLKGTVVLMRKNVLDLNDLGATIIDGIGEFLG--KGVTCQLISSTAVDQDNGGR 318 G +S L+ +L L +DLG T+ E LG K + S+T VD GG Sbjct: 282 GDRRSEMLEDIRILTGAKTLVSDDLGVTVESLTVEDLGTAKSIIISKDSTTIVD---GGG 338 Query: 319 GKVGAEAELEQWVTSLPSLTTGESK 393 K +A ++Q T + T+ K Sbjct: 339 EKTSIDARVKQIKTQIDKTTSDYDK 363
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 401 RPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMP--SMM 228 R LDS V+ +V C +S + PRP ++W +++ LPR + + S++ Sbjct: 410 RGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTLLESGSLL 465 Query: 227 VAP 219 ++P Sbjct: 466 ISP 468
>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101| Length = 625 Score = 25.4 bits (54), Expect(2) = 8.4 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = -1 Query: 398 PNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMPSMMVAP 219 P++ + S TH S S S+ T P S S V+ NSPM S ++P Sbjct: 382 PHVSTSYASAPMTATHSSHSVSSGTPALTPPSSS---------VSYTSGNSPMSSSGMSP 432 Query: 218 RSLRSST 198 S SST Sbjct: 433 ISRHSST 439 Score = 21.2 bits (43), Expect(2) = 8.4 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -2 Query: 124 LPAASCSWPPLLAFTAPTNGTSTLF 50 LPA + + P + TAPT+ T F Sbjct: 447 LPAVTLGYSPHHSATAPTSTLGTNF 471
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 28.1 bits (61), Expect = 8.8 Identities = 23/76 (30%), Positives = 33/76 (43%) Frame = -1 Query: 419 TSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPM 240 T++ V+PN PV + T TF RPP++ ST + V P RN P+ Sbjct: 412 TAKEAVKPN--QPV----EVQTPLPKQELPETFQRPPIASSTPMPRAEPSVIPAARNEPI 465 Query: 239 PSMMVAPRSLRSSTFL 192 L++S FL Sbjct: 466 --------GLKASDFL 473 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,859,320 Number of Sequences: 219361 Number of extensions: 831061 Number of successful extensions: 3469 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3430 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
