Clone Name | bastl17b07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3793 Score = 63.9 bits (32), Expect = 7e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 57 tggcgatggagatcgagtcgagcgtcacggcggaggactg 96 ||||||||||||||||||| | |||||||||||||||||| Sbjct: 277 tggcgatggagatcgagtccaccgtcacggcggaggactg 316
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 7e-08 Identities = 38/40 (95%) Strand = Plus / Minus Query: 57 tggcgatggagatcgagtcgagcgtcacggcggaggactg 96 ||||||||||||||||||| | |||||||||||||||||| Sbjct: 29513920 tggcgatggagatcgagtccaccgtcacggcggaggactg 29513881
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 63.9 bits (32), Expect = 7e-08 Identities = 38/40 (95%) Strand = Plus / Minus Query: 57 tggcgatggagatcgagtcgagcgtcacggcggaggactg 96 ||||||||||||||||||| | |||||||||||||||||| Sbjct: 108950 tggcgatggagatcgagtccaccgtcacggcggaggactg 108911
>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full insert sequence Length = 3793 Score = 63.9 bits (32), Expect = 7e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 57 tggcgatggagatcgagtcgagcgtcacggcggaggactg 96 ||||||||||||||||||| | |||||||||||||||||| Sbjct: 277 tggcgatggagatcgagtccaccgtcacggcggaggactg 316
>gb|U72144.2|U72144 Streptomyces collinus 1-cyclohexenylcarbonyl CoA reductase (chcA) gene, complete cds Length = 8763 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ggccgtggcgatggagatcg 71 |||||||||||||||||||| Sbjct: 2004 ggccgtggcgatggagatcg 2023
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ggccgtggcgatggagatc 70 ||||||||||||||||||| Sbjct: 2302115 ggccgtggcgatggagatc 2302133 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 tctctggccgtggcgatgg 65 ||||||||||||||||||| Sbjct: 1908362 tctctggccgtggcgatgg 1908344
>ref|XM_657255.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4743.2), mRNA Length = 600 Score = 38.2 bits (19), Expect = 4.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 ctctggccgtggcgatggagatc 70 ||||||||||||||| ||||||| Sbjct: 443 ctctggccgtggcgaaggagatc 465
>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a novel gene, the 5' end of the CAMTA1 gene for calmodulin binding transcription activator 1, a ribosomal protein L37 (RPL37) pseudogene and a CpG island, complete sequence Length = 204394 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 ggggctcctctctctggcc 55 ||||||||||||||||||| Sbjct: 203689 ggggctcctctctctggcc 203707
>emb|AL512330.13| Human DNA sequence from clone RP11-334N17 on chromosome 1 Contains a novel gene, complete sequence Length = 61505 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 ggggctcctctctctggcc 55 ||||||||||||||||||| Sbjct: 1295 ggggctcctctctctggcc 1313
>emb|AL353618.11| Human DNA sequence from clone RP11-550K21 on chromosome 6, complete sequence Length = 32451 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 ggggctcctctctctggcc 55 ||||||||||||||||||| Sbjct: 23256 ggggctcctctctctggcc 23238
>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179055 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagat 69 ||||||||||||||||||| Sbjct: 128829 tggccgtggcgatggagat 128811
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ccgtggcgatggagatcga 72 ||||||||||||||||||| Sbjct: 4053377 ccgtggcgatggagatcga 4053395
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 4.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagatcgag 73 ||||| ||||||||||||||||| Sbjct: 21682833 tggccatggcgatggagatcgag 21682811
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 38.2 bits (19), Expect = 4.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagatcgag 73 ||||| ||||||||||||||||| Sbjct: 139386 tggccatggcgatggagatcgag 139364
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 38.2 bits (19), Expect = 4.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagatcgag 73 ||||| ||||||||||||||||| Sbjct: 34884 tggccatggcgatggagatcgag 34862
>tpe|BN000505.3| TPA: TPA_inf: Magnaporthe grisea 70-15 syn8 gene for putative polyketide synthase, exons 1-2 Length = 13004 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagat 69 ||||||||||||||||||| Sbjct: 10398 tggccgtggcgatggagat 10380
>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence Length = 167396 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 actggggctcctctctctg 52 ||||||||||||||||||| Sbjct: 118284 actggggctcctctctctg 118302
>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete sequence Length = 323816 Score = 38.2 bits (19), Expect = 4.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 tggccgtggcgatggagat 69 ||||||||||||||||||| Sbjct: 121709 tggccgtggcgatggagat 121691 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 570,612 Number of Sequences: 3902068 Number of extensions: 570612 Number of successful extensions: 52522 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52222 Number of HSP's gapped (non-prelim): 300 length of query: 96 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 75 effective length of database: 17,151,101,840 effective search space: 1286332638000 effective search space used: 1286332638000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)