ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FRAT1_MOUSE (P70339) Proto-oncogene FRAT1 (Frequently rearranged... 29 4.3
2FRAT2_MOUSE (Q8K025) GSK-3-binding protein FRAT2 (Frat-2) 28 7.3

>FRAT1_MOUSE (P70339) Proto-oncogene FRAT1 (Frequently rearranged in advanced|
           T-cell lymphomas) (Frat-1)
          Length = 274

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = +3

Query: 3   PPPPRLLCSIGSERTGDPSR 62
           PPPP++L ++ +++TG P+R
Sbjct: 68  PPPPQVLAALPADKTGTPAR 87



to top

>FRAT2_MOUSE (Q8K025) GSK-3-binding protein FRAT2 (Frat-2)|
          Length = 231

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 3   PPPPRLLCSIGSERTGDPSR 62
           P PPR+L ++ +++TG P+R
Sbjct: 70  PAPPRVLAALSADKTGTPAR 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,346,945
Number of Sequences: 219361
Number of extensions: 160242
Number of successful extensions: 594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 80,573,946
effective HSP length: 5
effective length of database: 79,477,141
effective search space used: 1907451384
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top