>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I|
          Length = 638

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 27/59 (45%), Positives = 29/59 (49%)
 Frame = +1

Query: 223 YKEALAELTFNCKPIITELTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPALYLLDS 399
           Y  AL +LTFN KPII  LT IA Q                  + P   KLPALYLLDS
Sbjct: 8   YLSALEDLTFNSKPIIHTLTYIA-QENEPYAISIVNAIEKHIQKCPPNCKLPALYLLDS 65

>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +1

Query: 223 YKEALAELTFNCKPIITELTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPALYLLDS 399
           Y+ +L +LTFN KP I  LTI+A ++                 + P  +KLP +YL+DS
Sbjct: 121 YQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTA-KAPSSEKLPVMYLMDS 178

>PCF11_YEAST (P39081) Protein PCF11 (protein 1 of CF I)|
          Length = 626

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 23/63 (36%), Positives = 31/63 (49%)
 Frame = +1

Query: 211 VVGVYKEALAELTFNCKPIITELTIIAGQHXXXXXXXXXXXXXXXXLEVPVEQKLPALYL 390
           +V  +   L ELTFN +PIIT LT +A ++                  +P +QKL A Y 
Sbjct: 8   IVKDFNSILEELTFNSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMP-KQKLYAFYA 66

Query: 391 LDS 399
           LDS
Sbjct: 67  LDS 69

>MASY_GOSHI (P17432) Malate synthase, glyoxysomal (EC 2.3.3.9)|
          Length = 567

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 136 VVGQVVERFRARLREEAGEEPKAAAVVGVYKEALAELTFNC 258
           V G+VVE   AR+  E G+E       G+YKEA    T  C
Sbjct: 501 VFGRVVEEEMARIEREVGKEKFKK---GMYKEACKIFTRQC 538

>EPOR_MOUSE (P14753) Erythropoietin receptor precursor (EPO-R)|
          Length = 507

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 10 PAWPCFASACLLLVASLPNPSPRRPFPE 93
          P WP     CLLL  +   PSP  P P+
Sbjct: 7  PLWPRVGPLCLLLAGAAWAPSPSLPDPK 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,313,246
Number of Sequences: 219361
Number of extensions: 378464
Number of successful extensions: 1062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)