ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-) 28 5.7

>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 330 SSGRWASM*ASTSGSVGGRPSGKDSSQARAAIS 232
           SSG+ +S  +STSGS  G  SG  S Q+  + S
Sbjct: 331 SSGKTSSAASSTSGSQSGSQSGSQSGQSTGSQS 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,025,002
Number of Sequences: 219361
Number of extensions: 215216
Number of successful extensions: 1149
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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