ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483481.1| Oryza sativa (japonica cultivar-group), mRNA 214 1e-52
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
3dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
4dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
5dbj|AK120362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 1e-52
6gb|AF107207.2| Mycobacterium avium insertion sequence IS666 tran... 48 0.018
7ref|XM_464703.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
8ref|XM_755763.1| Ustilago maydis 521 hypothetical protein (UM047... 44 0.28
9gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.28
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
11gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 o... 44 0.28
12gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.28
13dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
14dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
15gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.1
16gb|AY095952.1| Bordetella avium heme utilization locus, complete... 42 1.1
17emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.1
18emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 42 1.1
19emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 42 1.1
20gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
21gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.4
22ref|XM_508630.1| PREDICTED: Pan troglodytes similar to Rho guani... 40 4.4
23gb|AF335591.1| Homo sapiens WNT4 (WNT4) gene, partial cds 40 4.4
24ref|XM_592181.2| PREDICTED: Bos taurus similar to Y37D8A.2, tran... 40 4.4
25ref|XM_872972.1| PREDICTED: Bos taurus similar to Y37D8A.2, tran... 40 4.4
26ref|XM_872890.1| PREDICTED: Bos taurus similar to Y37D8A.2, tran... 40 4.4
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.4
28gb|AY519504.1| Mus musculus extended extralong alpha s XXLb2 mRN... 40 4.4
29gb|AY519503.1| Mus musculus extended extralong alpha s XXLb1 mRN... 40 4.4
30gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 4.4
31emb|AJ784793.1| Agromyces luteolus partial gyrB gene for DNA gyr... 40 4.4
32gb|BC112461.1| Bos taurus similar to Y37D8A.2, mRNA (cDNA clone ... 40 4.4
33emb|AL445253.13| Human DNA sequence from clone RP4-660K3 on chro... 40 4.4
34gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.4
35emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.4
36emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete ... 40 4.4
37emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chr... 40 4.4
38gb|AE011625.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.4
39gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 4.4
40gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, co... 40 4.4
41ref|XM_939639.1| PREDICTED: Homo sapiens similar to Sphingomyeli... 40 4.4
42gb|AY033057.1|AY033055S3 Homo sapiens secreted glycoprotein Wnt4... 40 4.4
43gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.4
44gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.4
45dbj|AK030489.1| Mus musculus adult male pituitary gland cDNA, RI... 40 4.4
46dbj|AK047990.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.4
47gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete ge... 40 4.4
48gb|AE004806.1| Pseudomonas aeruginosa PAO1, section 367 of 529 o... 40 4.4
49gb|AE004447.1| Pseudomonas aeruginosa PAO1, section 8 of 529 of ... 40 4.4
50gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 4.4
51ref|XM_578206.1| PREDICTED: Rattus norvegicus similar to extende... 40 4.4
52gb|AF427793.1| Nannocystis exedends retron-Ne144, complete sequence 40 4.4
53dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 4.4
54dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.4
55emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chr... 40 4.4
56gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.4
57gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 4.4
58gb|U67266.1|HSKAMS01 Human metastasis suppressor (KAI1) gene, ex... 40 4.4
59gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 4.4
60emb|AJ251761.1|MMU251761 Mus musculus Nesp55 gene for neuroendoc... 40 4.4
61emb|AJ245739.1|MMU245739 Mus musculus partial Gnasxl gene for ex... 40 4.4 
>ref|XM_483481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2667

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Plus

                                                                       
Query: 150 cgccggccacgcccccgaacccgacccctccgccggccacgcacccccacccctcgtcct 209
           |||||||||||||||| |||||| || |||| || ||| |||  || | | |||  ||||
Sbjct: 149 cgccggccacgccccccaacccgcccgctccccccgccgcgccgccgcccaccttctcct 208

                                                                       
Query: 210 ccacgcggccgccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 269
           || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 268

                                                                       
Query: 270 atggccgccctcccaccgagcccgaggtcgacgcctacatcgacgcccaccgccccgagc 329
           | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 269 acggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagc 328

               
Query: 330 tccc 333
           ||||
Sbjct: 329 tccc 332



 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                     
Query: 8  atgccggaaccgcaggccatcctcccgctccgcgcgctgccgccggacgcgccgctccc 66
          |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1  atgccggagccgcaggccatcctcccgctccgcgcgctcccgccggacgcgccgctccc 59
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Minus

                                                                            
Query: 150      cgccggccacgcccccgaacccgacccctccgccggccacgcacccccacccctcgtcct 209
                |||||||||||||||| |||||| || |||| || ||| |||  || | | |||  ||||
Sbjct: 26455072 cgccggccacgccccccaacccgcccgctccccccgccgcgccgccgcccaccttctcct 26455013

                                                                            
Query: 210      ccacgcggccgccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 269
                || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26455012 cctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 26454953

                                                                            
Query: 270      atggccgccctcccaccgagcccgaggtcgacgcctacatcgacgcccaccgccccgagc 329
                | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 26454952 acggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagc 26454893

                    
Query: 330      tccc 333
                ||||
Sbjct: 26454892 tccc 26454889



 Score =  103 bits (52), Expect = 4e-19
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                            
Query: 7        aatgccggaaccgcaggccatcctcccgctccgcgcgctgccgccggacgcgccgctccc 66
                ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 26455221 aatgccggagccgcaggccatcctcccgctccgcgcgctcccgccggacgcgccgctccc 26455162
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1789_C07
          Length = 138944

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Minus

                                                                          
Query: 150    cgccggccacgcccccgaacccgacccctccgccggccacgcacccccacccctcgtcct 209
              |||||||||||||||| |||||| || |||| || ||| |||  || | | |||  ||||
Sbjct: 104624 cgccggccacgccccccaacccgcccgctccccccgccgcgccgccgcccaccttctcct 104565

                                                                          
Query: 210    ccacgcggccgccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 269
              || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104564 cctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 104505

                                                                          
Query: 270    atggccgccctcccaccgagcccgaggtcgacgcctacatcgacgcccaccgccccgagc 329
              | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 104504 acggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagc 104445

                  
Query: 330    tccc 333
              ||||
Sbjct: 104444 tccc 104441



 Score =  103 bits (52), Expect = 4e-19
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                          
Query: 7      aatgccggaaccgcaggccatcctcccgctccgcgcgctgccgccggacgcgccgctccc 66
              ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 104773 aatgccggagccgcaggccatcctcccgctccgcgcgctcccgccggacgcgccgctccc 104714
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0702E04
          Length = 190948

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Minus

                                                                        
Query: 150  cgccggccacgcccccgaacccgacccctccgccggccacgcacccccacccctcgtcct 209
            |||||||||||||||| |||||| || |||| || ||| |||  || | | |||  ||||
Sbjct: 3939 cgccggccacgccccccaacccgcccgctccccccgccgcgccgccgcccaccttctcct 3880

                                                                        
Query: 210  ccacgcggccgccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 269
            || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 cctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 3820

                                                                        
Query: 270  atggccgccctcccaccgagcccgaggtcgacgcctacatcgacgcccaccgccccgagc 329
            | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 3819 acggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagc 3760

                
Query: 330  tccc 333
            ||||
Sbjct: 3759 tccc 3756



 Score =  103 bits (52), Expect = 4e-19
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                        
Query: 7    aatgccggaaccgcaggccatcctcccgctccgcgcgctgccgccggacgcgccgctccc 66
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4088 aatgccggagccgcaggccatcctcccgctccgcgcgctcccgccggacgcgccgctccc 4029
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>dbj|AK120362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O11, full
           insert sequence
          Length = 3156

 Score =  214 bits (108), Expect = 1e-52
 Identities = 165/184 (89%)
 Strand = Plus / Plus

                                                                       
Query: 150 cgccggccacgcccccgaacccgacccctccgccggccacgcacccccacccctcgtcct 209
           |||||||||||||||| |||||| || |||| || ||| |||  || | | |||  ||||
Sbjct: 199 cgccggccacgccccccaacccgcccgctccccccgccgcgccgccgcccaccttctcct 258

                                                                       
Query: 210 ccacgcggccgccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 269
           || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttccccg 318

                                                                       
Query: 270 atggccgccctcccaccgagcccgaggtcgacgcctacatcgacgcccaccgccccgagc 329
           | |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 319 acggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagc 378

               
Query: 330 tccc 333
           ||||
Sbjct: 379 tccc 382



 Score =  103 bits (52), Expect = 4e-19
 Identities = 58/60 (96%)
 Strand = Plus / Plus

                                                                       
Query: 7   aatgccggaaccgcaggccatcctcccgctccgcgcgctgccgccggacgcgccgctccc 66
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 50  aatgccggagccgcaggccatcctcccgctccgcgcgctcccgccggacgcgccgctccc 109
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>gb|AF107207.2| Mycobacterium avium insertion sequence IS666 transposase gene,
           complete cds
          Length = 1472

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 291 ccgaggtcgacgcctacatcgacgccca 318
           ||||||||| ||||||||||||||||||
Sbjct: 253 ccgaggtcgccgcctacatcgacgccca 280
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>ref|XM_464703.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1179

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 119 agcgccagcgccagcgtcaccccgac 144
           ||||||||||||||||||||| ||||
Sbjct: 71  agcgccagcgccagcgtcaccgcgac 46
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>ref|XM_755763.1| Ustilago maydis 521 hypothetical protein (UM04709.1) partial mRNA
          Length = 5223

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 41   gcgctgccgccggacgcgccgctccc 66
            ||||| ||||||||||||||||||||
Sbjct: 2387 gcgcttccgccggacgcgccgctccc 2412
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 113    acggccagcgccagcgccagcg 134
              ||||||||||||||||||||||
Sbjct: 620445 acggccagcgccagcgccagcg 620424
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 119     agcgccagcgccagcgtcaccccgac 144
               ||||||||||||||||||||| ||||
Sbjct: 6797900 agcgccagcgccagcgtcaccgcgac 6797875
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>gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 of the complete
            genome
          Length = 14999

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 43   gctgccgccggacgcgccgctc 64
            ||||||||||||||||||||||
Sbjct: 9866 gctgccgccggacgcgccgctc 9845
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 20   caggccatcctcccgctccgcg 41
            ||||||||||||||||||||||
Sbjct: 5563 caggccatcctcccgctccgcg 5584
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>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0758B01
          Length = 159206

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 119   agcgccagcgccagcgtcaccccgac 144
             ||||||||||||||||||||| ||||
Sbjct: 15626 agcgccagcgccagcgtcaccgcgac 15601
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1131G07
          Length = 133992

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 119    agcgccagcgccagcgtcaccccgac 144
              ||||||||||||||||||||| ||||
Sbjct: 118953 agcgccagcgccagcgtcaccgcgac 118928
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 116     gccagcgccagcgccagcgtc 136
               |||||||||||||||||||||
Sbjct: 2803327 gccagcgccagcgccagcgtc 2803347
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>gb|AY095952.1| Bordetella avium heme utilization locus, complete sequence
          Length = 8877

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  cggccagcgccagcgccagcg 134
            |||||||||||||||||||||
Sbjct: 7453 cggccagcgccagcgccagcg 7433
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    acggccagcgccagcgccagc 133
              |||||||||||||||||||||
Sbjct: 127597 acggccagcgccagcgccagc 127617
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    acggccagcgccagcgccagc 133
              |||||||||||||||||||||
Sbjct: 178785 acggccagcgccagcgccagc 178765
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    cggccagcgccagcgccagcg 134
              |||||||||||||||||||||
Sbjct: 250185 cggccagcgccagcgccagcg 250205
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 115     ggccagcgccagcgccagcgt 135
               |||||||||||||||||||||
Sbjct: 1239847 ggccagcgccagcgccagcgt 1239827
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     ggccagcgccagcgccagcg 134
               ||||||||||||||||||||
Sbjct: 3191002 ggccagcgccagcgccagcg 3190983
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>ref|XM_508630.1| PREDICTED: Pan troglodytes similar to Rho guanine nucleotide exchange
            factor (GEF) 17; Rho-specific guanine-nucleotide exchange
            factor 164 kDa (LOC451411), mRNA
          Length = 8316

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  cgccgcgcgcgcctggctcg 257
            ||||||||||||||||||||
Sbjct: 3417 cgccgcgcgcgcctggctcg 3436
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>gb|AF335591.1| Homo sapiens WNT4 (WNT4) gene, partial cds
          Length = 6876

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  cggccagcgccagcgccagc 133
            ||||||||||||||||||||
Sbjct: 6281 cggccagcgccagcgccagc 6262
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>ref|XM_592181.2| PREDICTED: Bos taurus similar to Y37D8A.2, transcript variant 1
           (LOC514347), mRNA
          Length = 3263

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 ggccagcgccagcgccagcgtcac 138
           |||||||||||||||| |||||||
Sbjct: 60  ggccagcgccagcgcccgcgtcac 37
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>ref|XM_872972.1| PREDICTED: Bos taurus similar to Y37D8A.2, transcript variant 3
           (LOC514347), mRNA
          Length = 3361

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 ggccagcgccagcgccagcgtcac 138
           |||||||||||||||| |||||||
Sbjct: 29  ggccagcgccagcgcccgcgtcac 6
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>ref|XM_872890.1| PREDICTED: Bos taurus similar to Y37D8A.2, transcript variant 2
           (LOC514347), mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 ggccagcgccagcgccagcgtcac 138
           |||||||||||||||| |||||||
Sbjct: 29  ggccagcgccagcgcccgcgtcac 6
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 32      ccgctccgcgcgctgccgccggacgcgc 59
               |||||| |||||||||||||| ||||||
Sbjct: 3438044 ccgctcggcgcgctgccgccgcacgcgc 3438071
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>gb|AY519504.1| Mus musculus extended extralong alpha s XXLb2 mRNA, complete cds,
            alternatively spliced
          Length = 3637

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 2406 ggccagcgccagcgccagcg 2425
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>gb|AY519503.1| Mus musculus extended extralong alpha s XXLb1 mRNA, complete cds,
            alternatively spliced
          Length = 2734

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 2406 ggccagcgccagcgccagcg 2425
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 117     ccagcgccagcgccagcgtc 136
               ||||||||||||||||||||
Sbjct: 3416086 ccagcgccagcgccagcgtc 3416105
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>emb|AJ784793.1| Agromyces luteolus partial gyrB gene for DNA gyrase subunit B
          Length = 933

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  cgcaggccatcctcccgctccgcg 41
           ||||||||||||||||||| ||||
Sbjct: 823 cgcaggccatcctcccgctgcgcg 846
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>gb|BC112461.1| Bos taurus similar to Y37D8A.2, mRNA (cDNA clone MGC:134065
           IMAGE:8047337), complete cds
          Length = 2633

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 ggccagcgccagcgccagcgtcac 138
           |||||||||||||||| |||||||
Sbjct: 117 ggccagcgccagcgcccgcgtcac 94
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>emb|AL445253.13| Human DNA sequence from clone RP4-660K3 on chromosome 1 Contains the
            5' end of the WNT4 gene for wingless-type MMTV
            integration site family (member 4) and a CpG island,
            complete sequence
          Length = 17429

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  cggccagcgccagcgccagc 133
            ||||||||||||||||||||
Sbjct: 2373 cggccagcgccagcgccagc 2392
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 106     agccgctacggccagcgccagcgccagc 133
               |||||| ||||||||| |||||||||||
Sbjct: 1350808 agccgccacggccagcaccagcgccagc 1350781
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 32      ccgctccgcgcgctgccgccggacgcgc 59
               |||||| |||||||||||||| ||||||
Sbjct: 3179141 ccgctcggcgcgctgccgccgcacgcgc 3179168
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>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10
          Length = 312050

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    ccccagccgctacggccagcgcca 125
              |||||||||||| |||||||||||
Sbjct: 253771 ccccagccgctatggccagcgcca 253794
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>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete
              sequence
          Length = 206452

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ggccagcgccagcgccagcg 134
              ||||||||||||||||||||
Sbjct: 156636 ggccagcgccagcgccagcg 156655
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>gb|AE011625.1| Xanthomonas axonopodis pv. citri str. 306,  section 3 of 469 of the
            complete genome
          Length = 10597

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   gcgcgctgccgccggacgcgccgc 62
            ||||||||||||| ||||||||||
Sbjct: 4554 gcgcgctgccgccagacgcgccgc 4531
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     cggccagcgccagcgccagc 133
               ||||||||||||||||||||
Sbjct: 4345730 cggccagcgccagcgccagc 4345749
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>gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, complete sequence
          Length = 192391

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   cccctccgccggccacgcccccga 167
             |||||||||||||| |||||||||
Sbjct: 70369 cccctccgccggccccgcccccga 70392
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>ref|XM_939639.1| PREDICTED: Homo sapiens similar to Sphingomyelin phosphodiesterase
           precursor (Acid sphingomyelinase) (aSMase) (LOC654116),
           mRNA
          Length = 156

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 ggccagcgccagcgccagcg 134
           ||||||||||||||||||||
Sbjct: 132 ggccagcgccagcgccagcg 113
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>gb|AY033057.1|AY033055S3 Homo sapiens secreted glycoprotein Wnt4 (WNT4) gene, exon 1 and
            partial cds
          Length = 5334

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  cggccagcgccagcgccagc 133
            ||||||||||||||||||||
Sbjct: 3326 cggccagcgccagcgccagc 3307
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 36      tccgcgcgctgccgccggacgcgccgct 63
               ||||||||||||  ||||||||||||||
Sbjct: 3498059 tccgcgcgctgcacccggacgcgccgct 3498086
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 117     ccagcgccagcgccagcgtc 136
               ||||||||||||||||||||
Sbjct: 3568767 ccagcgccagcgccagcgtc 3568786
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>dbj|AK030489.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
            enriched library, clone:5330418M12 product:XLALPHAS
            PROTEIN (FRAGMENT) homolog [Mus musculus], full insert
            sequence
          Length = 2880

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 1337 ggccagcgccagcgccagcg 1356
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>dbj|AK047990.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130027O20 product:XLALPHAS PROTEIN
            (FRAGMENT) homolog [Mus musculus], full insert sequence
          Length = 2962

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 1557 ggccagcgccagcgccagcg 1576
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>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome
          Length = 335593

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    gccagcgccagcgccagcgtcacc 139
              ||||||||||||||||||| ||||
Sbjct: 224394 gccagcgccagcgccagcgccacc 224371
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>gb|AE004806.1| Pseudomonas aeruginosa PAO1, section 367 of 529 of the complete
            genome
          Length = 10506

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 36   tccgcgcgctgccgccggacgcgccgct 63
            ||||||||||| || |||||||||||||
Sbjct: 4700 tccgcgcgctggcggcggacgcgccgct 4727
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>gb|AE004447.1| Pseudomonas aeruginosa PAO1, section 8 of 529 of the complete
           genome
          Length = 18088

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 gccagcgccagcgccagcgt 135
           ||||||||||||||||||||
Sbjct: 471 gccagcgccagcgccagcgt 452
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     ccagcgccagcgccagcgtc 136
               ||||||||||||||||||||
Sbjct: 2487032 ccagcgccagcgccagcgtc 2487013
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>ref|XM_578206.1| PREDICTED: Rattus norvegicus similar to extended extralong alpha s
            XXLb1 (LOC502706), mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 1197 ggccagcgccagcgccagcg 1216
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>gb|AF427793.1| Nannocystis exedends retron-Ne144, complete sequence
          Length = 3243

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 283  caccgagcccgaggtcgacg 302
            ||||||||||||||||||||
Sbjct: 2172 caccgagcccgaggtcgacg 2191
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 183     cggccacgcacccccacccctcgtcctccacg 214
               |||||||||||||| || |||| |||||||||
Sbjct: 1088574 cggccacgcaccccaacgcctcctcctccacg 1088605
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     acggccagcgccagcgccag 132
               ||||||||||||||||||||
Sbjct: 2127581 acggccagcgccagcgccag 2127600
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>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete
             sequence
          Length = 93822

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ggccagcgccagcgccagcg 134
             ||||||||||||||||||||
Sbjct: 57328 ggccagcgccagcgccagcg 57309
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     acggccagcgccagcgccag 132
               ||||||||||||||||||||
Sbjct: 3279290 acggccagcgccagcgccag 3279271
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     tcgacgcccaccgccccgag 328
               ||||||||||||||||||||
Sbjct: 1364064 tcgacgcccaccgccccgag 1364083
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>gb|U67266.1|HSKAMS01 Human metastasis suppressor (KAI1) gene, exon 1
          Length = 1086

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 cccctccgccggccacgcccccga 167
           |||||||||||||| |||||||||
Sbjct: 649 cccctccgccggccccgcccccga 626
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 183    cggccacgcacccccacccctcgtcctccacg 214
              |||||||||||||| || |||| |||||||||
Sbjct: 761553 cggccacgcaccccaacgcctcctcctccacg 761584
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>emb|AJ251761.1|MMU251761 Mus musculus Nesp55 gene for neuroendocrine secretory protein 55 and
             partial Xlalphas gene for Xlalphas protein
          Length = 21927

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ggccagcgccagcgccagcg 134
             ||||||||||||||||||||
Sbjct: 18153 ggccagcgccagcgccagcg 18172
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>emb|AJ245739.1|MMU245739 Mus musculus partial Gnasxl gene for extra large alpha stimulating
            guanine-nucleotide binding protein
          Length = 6703

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ggccagcgccagcgccagcg 134
            ||||||||||||||||||||
Sbjct: 5528 ggccagcgccagcgccagcg 5547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,260,251
Number of Sequences: 3902068
Number of extensions: 2260251
Number of successful extensions: 60602
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56923
Number of HSP's gapped (non-prelim): 3667
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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