>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 305     cgcggcggcggccctgctgctcgc 328
               ||||||||||||||||||||||||
Sbjct: 3806828 cgcggcggcggccctgctgctcgc 3806805

>ref|XM_542189.2| PREDICTED: Canis familiaris similar to signal peptide peptidase-like
            2B isoform 2 (LOC485071), mRNA
          Length = 2643

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 318  ctgctgctcgcgctgctctgcctggc 343
            ||||||||||| ||||||||||||||
Sbjct: 1276 ctgctgctcgcactgctctgcctggc 1301

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 268     gcgacaaagcaatggcggccgtcggcaggc 297
               ||||||| ||||||||||||| ||||||||
Sbjct: 6229396 gcgacaaggcaatggcggccgccggcaggc 6229367

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 306     gcggcggcggccctgctgctcgcgctgctc 335
               |||||||||| | |||||||||||||||||
Sbjct: 2066216 gcggcggcgggcgtgctgctcgcgctgctc 2066245

>ref|NM_197900.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase
            (OSJNBa0035H01.10), mRNA
          Length = 3384

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 143  ctccagctgctgctcgtcgcc 163
            |||||||||||||||||||||
Sbjct: 1509 ctccagctgctgctcgtcgcc 1489

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 311     ggcggccctgctgctcgcgct 331
               |||||||||||||||||||||
Sbjct: 5318653 ggcggccctgctgctcgcgct 5318633

>ref|XM_532375.2| PREDICTED: Canis familiaris similar to TPA regulated locus
           (LOC475144), mRNA
          Length = 1509

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 317 cctgctgctcgcgctgctctg 337
           |||||||||||||||||||||
Sbjct: 60  cctgctgctcgcgctgctctg 80

>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete
             sequence
          Length = 64582

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   ctccagctgctgctcgtcgcc 163
             |||||||||||||||||||||
Sbjct: 59300 ctccagctgctgctcgtcgcc 59280

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 313    cggccctgctgctcgcgctgctctg 337
              ||||| |||||||||||||||||||
Sbjct: 228771 cggccatgctgctcgcgctgctctg 228747

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   gcggcggccctgctgctcgcg 329
             |||||||||||||||||||||
Sbjct: 66011 gcggcggccctgctgctcgcg 65991

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 298     tgccgagcgcggcggcggccc 318
               |||||||||||||||||||||
Sbjct: 4118766 tgccgagcgcggcggcggccc 4118786

>tpg|BK000089.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose
            synthase-like D1 gene, complete cds
          Length = 4188

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 143  ctccagctgctgctcgtcgcc 163
            |||||||||||||||||||||
Sbjct: 1778 ctccagctgctgctcgtcgcc 1758

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 143      ctccagctgctgctcgtcgcc 163
                |||||||||||||||||||||
Sbjct: 22543582 ctccagctgctgctcgtcgcc 22543562

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 143      ctccagctgctgctcgtcgcc 163
                |||||||||||||||||||||
Sbjct: 22556050 ctccagctgctgctcgtcgcc 22556030

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    gcggcggcggccctgctgct 325
              ||||||||||||||||||||
Sbjct: 556863 gcggcggcggccctgctgct 556882

>gb|DQ213916.1| Taeniopygia guttata clone 0058P0058F05 macrophage migration
           inhibitory factor (MIF) variant 1-like mRNA, complete
           sequence
          Length = 1030

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 303 agcgcggcggcggccctgctgctc 326
           |||||||||||||||| |||||||
Sbjct: 29  agcgcggcggcggccccgctgctc 52

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     gccgagcgcggcggcggccc 318
               ||||||||||||||||||||
Sbjct: 1535263 gccgagcgcggcggcggccc 1535244

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     gcaggctgccgagcgcggcg 311
               ||||||||||||||||||||
Sbjct: 2146268 gcaggctgccgagcgcggcg 2146249

>ref|XM_530663.1| PREDICTED: Pan troglodytes LOC460813 (LOC460813), mRNA
          Length = 1057

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 gccctgctgctcgcgctgct 334
           ||||||||||||||||||||
Sbjct: 501 gccctgctgctcgcgctgct 482

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     cggccctgctgctcgcgctg 332
               ||||||||||||||||||||
Sbjct: 2534797 cggccctgctgctcgcgctg 2534816

>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence
          Length = 187495

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 314    ggccctgctgctcgcgctgctctg 337
              |||||||||||||| |||||||||
Sbjct: 133930 ggccctgctgctcgggctgctctg 133907

>gb|AY098636.1| Mus musculus testhymin mRNA, complete cds
          Length = 6258

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 ctgccgagcgcggcggcggc 316
           ||||||||||||||||||||
Sbjct: 590 ctgccgagcgcggcggcggc 571

>gb|AY641455.1| Burkholderia glumae DNA binding protein (toxJ), putative transposase,
            putative outer membrane protein OprM precursor (toxI),
            probable RND efflux transporter (toxH), probable RND
            efflux membrane-fusion protein precursor (toxG),
            hypothetical protein (toxF), LysR type regulatory protein
            (toxR), putative ubiquinone/menaquinone biosynthesis
            methyltransferase (toxA), putative GTP cyclohydrolase II
            (toxB), WD repeat portein (toxC), hypothetical protein
            (toxD), putative deaminase (toxE), and putative
            transposase genes, complete cds
          Length = 16987

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcggcggccctgctgctcgc 328
            ||||||||||||||||||||
Sbjct: 3749 gcggcggccctgctgctcgc 3730

>gb|AC156290.10| Mus musculus 6 BAC RP24-267I24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 144883

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   ctgccgagcgcggcggcggc 316
             ||||||||||||||||||||
Sbjct: 31445 ctgccgagcgcggcggcggc 31426

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gcggcggccctgctgctcgc 328
             ||||||||||||||||||||
Sbjct: 72763 gcggcggccctgctgctcgc 72744

>ref|XM_575380.1| PREDICTED: Rattus norvegicus similar to testhymin (LOC500026), mRNA
          Length = 2369

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 ctgccgagcgcggcggcggc 316
           ||||||||||||||||||||
Sbjct: 212 ctgccgagcgcggcggcggc 193

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    tgccgagcgcggcggcggcc 317
              ||||||||||||||||||||
Sbjct: 749571 tgccgagcgcggcggcggcc 749590

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     gcggcggccctgctgctcgc 328
               ||||||||||||||||||||
Sbjct: 3137752 gcggcggccctgctgctcgc 3137733

>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323,
             complete sequence
          Length = 66637

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   gccctgctgctcgcgctgct 334
             ||||||||||||||||||||
Sbjct: 25565 gccctgctgctcgcgctgct 25584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,536,239
Number of Sequences: 3902068
Number of extensions: 2536239
Number of successful extensions: 51262
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50086
Number of HSP's gapped (non-prelim): 1176
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)