ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HSP70_SOYBN (P26413) Heat shock 70 kDa protein 29 2.5
2LNT_CHLCV (Q824Q5) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 29 3.3
3RS11_MYCPA (Q73S45) 30S ribosomal protein S11 29 3.3
4LEU3_MYCPA (Q73VI1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85... 28 4.3
5TYRO_AGABI (O42713) Tyrosinase (EC 1.14.18.1) (Monophenol monoox... 28 4.3
6YP76_CAEEL (Q09223) Hypothetical protein B0228.6 28 7.4
7FAD25_MYCTU (Q50586) Putative fatty-acid--CoA ligase fadD25 (EC ... 27 9.7
8MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 27 9.7
9EMID1_MOUSE (Q91VF5) EMI domain-containing protein 1 precursor (... 27 9.7

>HSP70_SOYBN (P26413) Heat shock 70 kDa protein|
          Length = 645

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 306 EPKPLNVARADAVQWRNGNHM-ELDRISKEARPKQGSCSAV 187
           E + +  A  DA+QW  GN M E+D    + +  +G C+ +
Sbjct: 571 EKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPI 611



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>LNT_CHLCV (Q824Q5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 541

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 114 FFPVKGGAASPKQGIQTQEKEPPSAPHCSFLALVSLLYLFDLVPCDCHFS 263
           FF + G A     G+     EP  +P  S+  L SLL+L+ +     HFS
Sbjct: 24  FFSLLGSAVG--YGLLWYSLEPQKSPKLSWRQLTSLLFLWSVTVYGVHFS 71



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>RS11_MYCPA (Q73S45) 30S ribosomal protein S11|
          Length = 138

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 120 PVKGGAASPKQGIQTQEKEPPSAPH 194
           P K  AA+PK+G +T+ +E  + PH
Sbjct: 3   PAKKAAAAPKKGQKTRRREKKNVPH 27



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>LEU3_MYCPA (Q73VI1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 336

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +1

Query: 100 ADQSIFSLSRVVLQVQSKGSRHRKKSLLVHR----TAASLLWSR 219
           +  + F + RVV+    +  R RK   LVH+    T A  LWSR
Sbjct: 148 SQNTAFGVRRVVVDAFERARRRRKHLTLVHKTNVLTFAGKLWSR 191



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>TYRO_AGABI (O42713) Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)|
           (Phenolase) (Monophenol oxidase) (Cresolase)
          Length = 556

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 173 FFLCLDPLLWTCSTTLDREKMLWSA 99
           FF   DP+ W   T +DR   LW A
Sbjct: 270 FFAAFDPIFWLHHTNVDRLLSLWKA 294



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>YP76_CAEEL (Q09223) Hypothetical protein B0228.6|
          Length = 153

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 20/84 (23%), Positives = 36/84 (42%)
 Frame = -1

Query: 326 SSGGRGKNQNLLTSHAQMQCSGEMAITWN*IE*VKKRDQSKEAAVRCTRRLFFLCLDPLL 147
           S  G+ K +   TS  +   + +  +  N  E VKKR  SK++ +   + +F +    L 
Sbjct: 13  SETGQIKKRGSKTSELKQNETTDAVVVNN--EKVKKRRNSKDSHIVLAKEIFAVAFFSLG 70

Query: 146 WTCSTTLDREKMLWSASKGSPEAS 75
            +C    D    LW  +  + + S
Sbjct: 71  MSCLLMADVSTFLWGINNPNSQQS 94



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>FAD25_MYCTU (Q50586) Putative fatty-acid--CoA ligase fadD25 (EC 6.2.1.-)|
           (Acyl-CoA synthetase)
          Length = 583

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 MELDRISKEARPKQGSCSAVH 184
           +E+DR+  +ARP  GS SA H
Sbjct: 144 IEVDRLDLDARPSSGSRSAAH 164



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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = +2

Query: 128 GWCCKSKARDPDTGKRAS*CTALQLPCFGLASLLIRSSSM*LPFLHCTASARATLRGFGS 307
           G C K     P + + A    A Q  C GL+   +  S   +P   CT  A   L   G+
Sbjct: 687 GVCTKYMQNCPKSQRYAYVVDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGA 746

Query: 308 CLGRRCC 328
           C+  + C
Sbjct: 747 CVPAQEC 753



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>EMID1_MOUSE (Q91VF5) EMI domain-containing protein 1 precursor (Protein Emu1)|
           (Emilin and multimerin domain-containing protein 1)
          Length = 444

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 151 CFGLAAPPLTGKKCFGRHQKAVPRHLFLTWRSWCEEKVTQVAS*HMSKGT 2
           C GL  P        G    +VP   F   R+WC   VT+  S H+  GT
Sbjct: 11  CLGLLLPG-------GGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGT 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,278,675
Number of Sequences: 219361
Number of extensions: 1032803
Number of successful extensions: 2905
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2900
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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