>gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRNA, complete cds
          Length = 1786

 Score =  400 bits (202), Expect = e-108
 Identities = 247/262 (94%)
 Strand = Plus / Plus

                                                                       
Query: 107 acgtcagcgagggcgctcgccccgaggatgatacacatacacgtgaagagggattgtcta 166
           |||||||||||| ||  |||||||||| |||||||||||| ||||||||||||||||| |
Sbjct: 47  acgtcagcgaggccgtccgccccgagggtgatacacatacgcgtgaagagggattgtcaa 106

                                                                       
Query: 167 aatccagggatcgtgacagagaaaaagaaaaggacagggagcgccatagggaccgtgacc 226
           ||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| 
Sbjct: 107 aatccagggatcgagacagagaaaaagacaaggataaggagcgccatagggaccgtgaca 166

                                                                       
Query: 227 gagatagaggaagagacagagatcggggtcgggacagggatctagacaaggatcgggata 286
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 167 gagatagaggaagagacagagatcggggtcgggacagggatctagacaaggatcgggaca 226

                                                                       
Query: 287 gggacaaggatcgggatcgtcaccaaaggcatcaccgtgagattagggagcaccgagacc 346
           |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||
Sbjct: 227 gggacaaggatcgggatcgtcaccaaaggcatcaccgtgacaaaagggagcaccgagacc 286

                                 
Query: 347 gtcctgatgatcacgatcgtca 368
           ||||||||||||||||||||||
Sbjct: 287 gtcctgatgatcacgatcgtca 308



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 55 cctcgacgcgagatggccgacgacaa 80
          ||||||||||||||||||||||||||
Sbjct: 1  cctcgacgcgagatggccgacgacaa 26

>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0064H09, complete sequence
          Length = 146742

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 184   agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 243
             ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 20028 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 20087

                       
Query: 244   agagatcggg 253
              |||||||||
Sbjct: 20088 cgagatcggg 20097



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 271   gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtga 326
             |||| |||| |||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 20133 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtga 20188

>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0082P17, complete sequence
          Length = 157539

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                          
Query: 184    agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 243
              ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 127646 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 127705

                        
Query: 244    agagatcggg 253
               |||||||||
Sbjct: 127706 cgagatcggg 127715



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 271    gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtga 326
              |||| |||| |||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 127751 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtga 127806

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 184      agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 243
                ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 26717083 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 26717142

                          
Query: 244      agagatcggg 253
                 |||||||||
Sbjct: 26717143 cgagatcggg 26717152



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 271      gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtga 326
                |||| |||| |||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 26717188 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtga 26717243

>dbj|AK066311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068A09, full
           insert sequence
          Length = 2841

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 184 agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 243
           ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 164 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 223

                     
Query: 244 agagatcggg 253
            |||||||||
Sbjct: 224 cgagatcggg 233



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 271 gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtga 326
           |||| |||| |||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 269 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtga 324

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 184      agagaaaaagaaaaggacagggagcgccatagggaccgtgaccgagatagaggaagagac 243
                ||||||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||
Sbjct: 27042633 agagaaaaagacaaggacagggaacgccacagggaccgtgacagagatcgaggaagagac 27042692

                          
Query: 244      agagatcggg 253
                 |||||||||
Sbjct: 27042693 cgagatcggg 27042702



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 271      gacaaggatcgggatagggacaaggatcgggatcgtcaccaaaggcatcaccgtga 326
                |||| |||| |||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 27042738 gacagggatagggacagggacaaggatcgggatcgccaccataggcatcaccgtga 27042793

>gb|AY104538.1| Zea mays PCO122195 mRNA sequence
          Length = 1262

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 313 aggcatcaccgtgagattagggagcaccgagaccgtcctgatgatcac 360
           |||||||||||||| |   |||| || |||||||||||||||||||||
Sbjct: 362 aggcatcaccgtgaaagacgggaacagcgagaccgtcctgatgatcac 409

>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 186    agaaaaagaaaaggacagggag 207
              ||||||||||||||||||||||
Sbjct: 155124 agaaaaagaaaaggacagggag 155103

>gb|AC009464.8| Homo sapiens 12 BAC RP11-19E18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146945

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 183   cagagaaaaagaaaaggacagg 204
             ||||||||||||||||||||||
Sbjct: 55729 cagagaaaaagaaaaggacagg 55750

>gb|BC082851.1| Xenopus laevis hypothetical LOC494751, mRNA (cDNA clone MGC:81632
            IMAGE:6864111), complete cds
          Length = 7873

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 184  agagaaaaagaaaaggacagggagcgccatagggaccgtgac 225
            ||||||| ||| | ||||||||||||  ||||||||||||||
Sbjct: 6856 agagaaagagagagggacagggagcgggatagggaccgtgac 6897

>ref|XM_656973.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4461.2), mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 215  gggaccgtgaccgagatagag 235
            |||||||||||||||||||||
Sbjct: 1205 gggaccgtgaccgagatagag 1225

>gb|DQ388031.1| Aucoumea klaineana clone ak25 microsatellite sequence
          Length = 775

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 227 gagatagaggaagagacagagatcg 251
           ||||||||| |||||||||||||||
Sbjct: 508 gagatagagaaagagacagagatcg 484

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    cagagaaaaagaaaaggacag 203
              |||||||||||||||||||||
Sbjct: 953163 cagagaaaaagaaaaggacag 953183

>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    cagagaaaaagaaaaggacag 203
              |||||||||||||||||||||
Sbjct: 115901 cagagaaaaagaaaaggacag 115921

>gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, complete sequence
          Length = 212353

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   agagaaaaagaaaaggacagggag 207
             ||||||||||||||||||| ||||
Sbjct: 46196 agagaaaaagaaaaggacaaggag 46173

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gacagagaaaaagaaaagga 200
              ||||||||||||||||||||
Sbjct: 237679 gacagagaaaaagaaaagga 237698

>gb|AF371960.1| Infectious spleen and kidney necrosis virus, complete genome
          Length = 111362

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 307  caccaaaggcatcaccgtgagatt 330
            ||||| ||||||||||||||||||
Sbjct: 6905 caccacaggcatcaccgtgagatt 6882

>gb|AC125253.9| Mus musculus chromosome 1, clone RP24-141C2, complete sequence
          Length = 144529

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   agagaaaaagaaaaggacagggag 207
             ||||||||||||||||||| ||||
Sbjct: 59576 agagaaaaagaaaaggacaaggag 59553

>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cagagaaaaagaaaaggaca 202
             ||||||||||||||||||||
Sbjct: 12540 cagagaaaaagaaaaggaca 12559

>ref|XM_424756.1| PREDICTED: Gallus gallus similar to Splicing factor,
            arginine/serine-rich 12 (Serine-arginine-rich splicing
            regulatory protein 86) (SRrp86) (SR-related protein of 86
            kDa) (LOC427168), mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  gacagagaaaaagaaaagga 200
            ||||||||||||||||||||
Sbjct: 1270 gacagagaaaaagaaaagga 1289

>gb|U23526.1| Caenorhabditis elegans cosmid C01C10, complete sequence
          Length = 22183

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   agagaaaaagaaaaggacag 203
             ||||||||||||||||||||
Sbjct: 16570 agagaaaaagaaaaggacag 16589

>ref|XM_505124.1| Yarrowia lipolytica CLIB122, YALI0F07557g predicted mRNA
          Length = 2172

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 220  cgtgaccgagatagaggaagagacagagatcg 251
            ||||| |||||||||| | |||||||||||||
Sbjct: 1096 cgtgaacgagatagagaacgagacagagatcg 1127

>gb|AC126567.8| Homo sapiens 3 BAC RP11-656G9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150746

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gagatagaggaagagacaga 246
              ||||||||||||||||||||
Sbjct: 108691 gagatagaggaagagacaga 108672

>ref|XM_785222.1| PREDICTED: Strongylocentrotus purpuratus similar to Beta-amyloid-like
            protein precursor (LOC585391), mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 227  gagatagaggaagagacagagatc 250
            ||||||||| ||||||||||||||
Sbjct: 1393 gagatagagcaagagacagagatc 1416

>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57
          Length = 199577

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    gtgacagagaaaaagaaaag 198
              ||||||||||||||||||||
Sbjct: 143473 gtgacagagaaaaagaaaag 143492

>emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC clone F7K2 (ESSA project)
          Length = 106702

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   gtgacagagaaaaagaaaag 198
             ||||||||||||||||||||
Sbjct: 94665 gtgacagagaaaaagaaaag 94684

>gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, complete sequence
          Length = 123372

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    aaaccaccctctgaccctgg 21
            ||||||||||||||||||||
Sbjct: 2199 aaaccaccctctgaccctgg 2180

>ref|XM_694616.1| PREDICTED: Danio rerio similar to RD RNA-binding protein
           (LOC571062), mRNA
          Length = 981

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 238 agagacagagatcggggtcgggacagggatctagacaaggatcgggat 285
           |||||| ||||||| |  ||||||||||||| ||||| ||| ||||||
Sbjct: 238 agagaccgagatcgagaccgggacagggatcgagacagggaccgggat 285

>gb|AC010376.5|AC010376 Homo sapiens chromosome 5 clone CTD-2060F24, complete sequence
          Length = 144887

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    aaaccaccctctgaccctgg 21
            ||||||||||||||||||||
Sbjct: 4354 aaaccaccctctgaccctgg 4373

>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
            BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cagagaaaaagaaaaggaca 202
            ||||||||||||||||||||
Sbjct: 3843 cagagaaaaagaaaaggaca 3824

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 174      ggatcgtgacagagaaaaagaaaa 197
                ||||||||||| ||||||||||||
Sbjct: 13005340 ggatcgtgacatagaaaaagaaaa 13005363

>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   ggatcgtgacagagaaaaagaaaa 197
             ||||||||||| ||||||||||||
Sbjct: 44141 ggatcgtgacatagaaaaagaaaa 44164

>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0577H07
          Length = 126757

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   ggatcgtgacagagaaaaagaaaa 197
             ||||||||||| ||||||||||||
Sbjct: 87717 ggatcgtgacatagaaaaagaaaa 87740

>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cagagaaaaagaaaaggaca 202
              ||||||||||||||||||||
Sbjct: 303201 cagagaaaaagaaaaggaca 303182

>gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromosome unknown, complete
             sequence
          Length = 209915

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   agagaaaaagaaaaggacag 203
             ||||||||||||||||||||
Sbjct: 91389 agagaaaaagaaaaggacag 91408

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 220     cgtgaccgagatagaggaagagacagagatcg 251
               ||||| |||||||||| | |||||||||||||
Sbjct: 1090981 cgtgaacgagatagagaacgagacagagatcg 1091012

>gb|L26461.1|RATREPEATS Rattus norvegicus DNA repeat sequence
          Length = 6941

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   accctcccctccagaccccc 56
            ||||||||||||||||||||
Sbjct: 6830 accctcccctccagaccccc 6811

>emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete sequence
          Length = 137286

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 238   agagacagagatcggggtcgggacagggatctagacaaggatcgggat 285
             |||||| ||||||| |  ||||||||||||| ||||| ||| ||||||
Sbjct: 16598 agagaccgagatcgagaccgggacagggatcgagacagggaccgggat 16645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,450,863
Number of Sequences: 3902068
Number of extensions: 3450863
Number of successful extensions: 83878
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83644
Number of HSP's gapped (non-prelim): 227
length of query: 368
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 346
effective length of database: 17,147,199,772
effective search space: 5932931121112
effective search space used: 5932931121112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)