Clone Name | bastl16f12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CUL1_ARATH (Q94AH6) Cullin-1 | 29 | 3.9 | 2 | ABCA1_MOUSE (P41233) ATP-binding cassette sub-family A member 1 ... | 28 | 5.1 |
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>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +1 Query: 154 ERKTVDLEEGWAFM 195 ERKT+DLE+GW +M Sbjct: 2 ERKTIDLEQGWDYM 15
>ABCA1_MOUSE (P41233) ATP-binding cassette sub-family A member 1 (ATP-binding| cassette transporter 1) (ATP-binding cassette 1) (ABC-1) Length = 2261 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -2 Query: 91 SSCRVASSPLSCVGKENGRTRREGKAGRG 5 SSCR +SS +SC+ KE+ ++ AG G Sbjct: 1140 SSCRNSSSTVSCLKKEDSVSQSSSDAGLG 1168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,900,662 Number of Sequences: 219361 Number of extensions: 262514 Number of successful extensions: 619 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 619 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)