Clone Name | bastl16f06 |
---|---|
Clone Library Name | barley_pub |
>HYIN1_BRAJA (P59385) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)| (Indole-3-acetamide hydrolase) Length = 524 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 227 REPTG*SWAWASLDNGPKERGGAASPLRKAEA 132 R P G W W+++D R GA S + EA Sbjct: 51 RRPKGPVWQWSAVDTAAAIRSGAISAVETVEA 82
>PHLPP_DROME (Q9VJ07) Protein phosphatase PHLPP-like protein (EC 3.1.3.16)| (dPHLPP) Length = 954 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 100 RLNNPIPRAVPASAFRSGDAAPPLSFGPLSKLAHAHDY 213 +L PI +VP ++ APP FG AH Y Sbjct: 834 QLPQPITTSVPLGSYHQVKQAPPGHFGSALSFQQAHSY 871
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 112 PIPRAVPASAFRSGDAAPPLSFGPLSKLAHAHDYPVGSR 228 P PR P + R G AAPP++ G +HA P +R Sbjct: 247 PAPRRTPRAPPRRGAAAPPVTGG----ASHAAPQPAAAR 281
>AACC3_ENTCL (P0A256) Aminoglycoside N(3')-acetyltransferase III (EC 2.3.1.81)| (ACC(3)-III) (Aminocyclitol 3-N-acetyltransferase type III) (Gentamicin-(3)-N-acetyl-transferase) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 239 LRRNREPTG*SWAWASLDNGPKER--GGAA---------SPLRKAEAGTARGMGLLRRAL 93 LR PTG +AS D P E GA P A AGT RG GLL + L Sbjct: 45 LRSAVGPTGTVMGYASWDRSPYEETLNGARLDDKARRTWPPFDPATAGTYRGFGLLNQFL 104
>AACC2_ACIBA (P29807) Aminoglycoside N(3')-acetyltransferase III (EC 2.3.1.81)| (Gentamicin-(3)-N-acetyl-transferase) (AAC(3)II) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 239 LRRNREPTG*SWAWASLDNGPKER--GGAA---------SPLRKAEAGTARGMGLLRRAL 93 LR PTG +AS D P E GA P A AGT RG GLL + L Sbjct: 45 LRSAVGPTGTVMGYASWDRSPYEETLNGARLDDKARRTWPPFDPATAGTYRGFGLLNQFL 104
>AAC32_SALSP (P0A255) Aminoglycoside N(3')-acetyltransferase III (EC 2.3.1.81)| (ACC(3)-III) (Aminocyclitol 3-N-acetyltransferase type III) (Gentamicin-(3)-N-acetyl-transferase) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 239 LRRNREPTG*SWAWASLDNGPKER--GGAA---------SPLRKAEAGTARGMGLLRRAL 93 LR PTG +AS D P E GA P A AGT RG GLL + L Sbjct: 45 LRSAVGPTGTVMGYASWDRSPYEETLNGARLDDKARRTWPPFDPATAGTYRGFGLLNQFL 104
>AAC31_SALSP (P13246) Aminoglycoside N(3')-acetyltransferase III (EC 2.3.1.81)| (ACC(3)-III) (Aminocyclitol 3-N-acetyltransferase type III) (Gentamicin-(3)-N-acetyl-transferase) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 239 LRRNREPTG*SWAWASLDNGPKER--GGAA---------SPLRKAEAGTARGMGLLRRAL 93 LR PTG +AS D P E GA P A AGT RG GLL + L Sbjct: 45 LRSAVGPTGTVMGYASWDRSPYEETLNGARLDDNARRTWPPFDPATAGTYRGFGLLNQFL 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,972,365 Number of Sequences: 219361 Number of extensions: 351255 Number of successful extensions: 1159 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1159 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)