ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl16e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 87.7 bits (44), Expect = 2e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 245 gccctcctcgccgtcgcatcaggtaaccctagccccggggtgtacgatcggggggccgag 304 |||||||||||||||||||| || |||||||||| ||||| | ||||||||||| || | Sbjct: 95104 gccctcctcgccgtcgcatcggggaaccctagcctcgggggtttcgatcggggggacgcg 95163 Query: 305 gaagcggaggcgtattcgatcctg 328 || ||||||||||| ||||||||| Sbjct: 95164 gaggcggaggcgtactcgatcctg 95187 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 ctctgatgcttcccaccccatggcccaccacattcccct 207 ||||||||||||||||||||||||| |||||||||||| Sbjct: 95022 ctctgatgcttcccaccccatggccacccacattcccct 95060
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 2e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 245 gccctcctcgccgtcgcatcaggtaaccctagccccggggtgtacgatcggggggccgag 304 |||||||||||||||||||| || |||||||||| ||||| | ||||||||||| || | Sbjct: 5180601 gccctcctcgccgtcgcatcggggaaccctagcctcgggggtttcgatcggggggacgcg 5180660 Query: 305 gaagcggaggcgtattcgatcctg 328 || ||||||||||| ||||||||| Sbjct: 5180661 gaggcggaggcgtactcgatcctg 5180684 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 169 ctctgatgcttcccaccccatggcccaccacattcccct 207 ||||||||||||||||||||||||| |||||||||||| Sbjct: 5180519 ctctgatgcttcccaccccatggccacccacattcccct 5180557 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 ccacctcttcctccttgccctcctcgccgtcgc 261 ||||||| ||||||| ||| ||||||||||||| Sbjct: 17171576 ccacctcctcctcctcgccgtcctcgccgtcgc 17171608
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Plus Query: 218 cgccgcctccaccacctcttcctccttgccctcctc 253 ||||||| |||||||||||||||||| |||||||| Sbjct: 233535 cgccgccaccaccacctcttcctcctccccctcctc 233570
>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence Length = 138242 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctccttg 245 ||||||||||||||||||||||| Sbjct: 75524 cctccaccacctcttcctccttg 75502
>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence Length = 166527 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctccttg 245 ||||||||||||||||||||||| Sbjct: 114985 cctccaccacctcttcctccttg 115007
>emb|BX072361.1|CNS09RZX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAD1BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 127 tcctccttgccctcctcgccgtc 149
>emb|BX070068.1|CNS09Q88 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6DH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 748 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 401 tcctccttgccctcctcgccgtc 379
>emb|BX068379.1|CNS09OXB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC52CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 856 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 300 tcctccttgccctcctcgccgtc 322
>emb|BX068378.1|CNS09OXA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 852 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 511 tcctccttgccctcctcgccgtc 489
>emb|BX067609.1|CNS09OBX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51BE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 429 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 277 tcctccttgccctcctcgccgtc 299
>emb|BX067608.1|CNS09OBW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51BE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 830 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 503 tcctccttgccctcctcgccgtc 481
>emb|BX061944.1|CNS09JYK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 824 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 265 tcctccttgccctcctcgccgtc 287
>emb|BX057462.1|CNS09GI2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC37BG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 730 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 285 tcctccttgccctcctcgccgtc 307
>emb|BX056299.1|CNS09FLR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC35CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 741 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 288 tcctccttgccctcctcgccgtc 310
>emb|BX055254.1|CNS09ESQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC33DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 225 tcctccttgccctcctcgccgtc 247
>emb|BX055253.1|CNS09ESP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC33DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 498 tcctccttgccctcctcgccgtc 476
>emb|BX054694.1|CNS09ED6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC32DH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 404 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 189 tcctccttgccctcctcgccgtc 211
>emb|BX049557.1|CNS09AEH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25CC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 459 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 237 tcctccttgccctcctcgccgtc 259
>emb|BX049556.1|CNS09AEG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25CC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 482 tcctccttgccctcctcgccgtc 460
>emb|BX049060.1|CNS09A0O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24DA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 855 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 522 tcctccttgccctcctcgccgtc 500
>emb|BX046605.1|CNS0984H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 914 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 265 tcctccttgccctcctcgccgtc 287
>emb|BX046604.1|CNS0984G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC20BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 959 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 940 tcctccttgccctcctcgccgtc 918
>emb|BX041706.1|CNS094CE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13BC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 900 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 239 tcctccttgccctcctcgccgtc 261
>emb|BX041977.1|CNS094JX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13CH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 657 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 478 tcctccttgccctcctcgccgtc 456
>emb|BX041661.1|CNS094B5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 512 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 497 tcctccttgccctcctcgccgtc 475
>emb|BX041260.1|CNS09400 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12CB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 859 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 524 tcctccttgccctcctcgccgtc 502
>emb|BX039117.1|CNS092CH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3DC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 608 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 331 tcctccttgccctcctcgccgtc 353
>emb|BX039116.1|CNS092CG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3DC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 732 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 527 tcctccttgccctcctcgccgtc 505
>emb|BX038773.1|CNS0922X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3BC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 688 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 315 tcctccttgccctcctcgccgtc 337
>emb|BX038772.1|CNS0922W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3BC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 684 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 526 tcctccttgccctcctcgccgtc 504
>emb|BX038693.1|CNS0920P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3AG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 704 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 300 tcctccttgccctcctcgccgtc 322
>emb|BX038692.1|CNS0920O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3AG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 702 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 535 tcctccttgccctcctcgccgtc 513
>emb|BX038208.1|CNS091N8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2CA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 669 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 327 tcctccttgccctcctcgccgtc 349
>emb|BX038207.1|CNS091N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2CA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 654 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 481 tcctccttgccctcctcgccgtc 459
>emb|BX038039.1|CNS091IJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2BA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 723 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 309 tcctccttgccctcctcgccgtc 331
>emb|BX038038.1|CNS091II Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2BA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 694 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 522 tcctccttgccctcctcgccgtc 500
>emb|BX037613.1|CNS0916P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB1AE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 667 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 326 tcctccttgccctcctcgccgtc 348
>emb|BX037612.1|CNS0916O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB1AE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 695 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 528 tcctccttgccctcctcgccgtc 506
>emb|BX037577.1|CNS0915P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB1AD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 653 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 304 tcctccttgccctcctcgccgtc 326
>emb|BX037488.1|CNS09138 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9DH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 819 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 256 tcctccttgccctcctcgccgtc 278
>emb|BX037487.1|CNS09137 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA9DH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 828 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 491 tcctccttgccctcctcgccgtc 469
>emb|BX036984.1|CNS090P8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9BA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 366 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 263 tcctccttgccctcctcgccgtc 285
>emb|BX032549.1|CNS08XA1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48BH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 601 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 500 tcctccttgccctcctcgccgtc 478
>emb|BX028080.1|CNS08TTW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42AA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 552 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 402 tcctccttgccctcctcgccgtc 380
>emb|BX027509.1|CNS08TE1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41AG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 393 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 278 tcctccttgccctcctcgccgtc 300
>emb|BX027508.1|CNS08TE0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41AG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 644 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 512 tcctccttgccctcctcgccgtc 490
>emb|BX024766.1|CNS08R9U Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA37DG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 460 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 219 tcctccttgccctcctcgccgtc 241
>emb|BX024765.1|CNS08R9T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37DG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 831 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 505 tcctccttgccctcctcgccgtc 483
>emb|BX019545.1|CNS08N8T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA29DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 377 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 234 tcctccttgccctcctcgccgtc 256
>emb|BX019544.1|CNS08N8S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 588 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 521 tcctccttgccctcctcgccgtc 499
>emb|BX021590.1|CNS08OTM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA32AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 607 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 266 tcctccttgccctcctcgccgtc 288
>emb|BX021589.1|CNS08OTL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA32AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 691 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 364 tcctccttgccctcctcgccgtc 342
>emb|BX021431.1|CNS08OP7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA31DB02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 853 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 290 tcctccttgccctcctcgccgtc 312
>emb|BX020809.1|CNS08O7X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30CG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 582 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 257 tcctccttgccctcctcgccgtc 235
>emb|BX012334.1|CNS08HOI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA19CD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 385 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 305 tcctccttgccctcctcgccgtc 327
>emb|BX008016.1|CNS08ECK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 827 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 273 tcctccttgccctcctcgccgtc 295
>emb|BX008015.1|CNS08ECJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 825 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 500 tcctccttgccctcctcgccgtc 478
>ref|XM_321749.2| Anopheles gambiae str. PEST ENSANGP00000016913 (ENSANGG00000014424), mRNA Length = 817 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tcctccttgccctcctcgccgtc 259 ||||||||||||||||||||||| Sbjct: 518 tcctccttgccctcctcgccgtc 496
>gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complete sequence Length = 209121 Score = 46.1 bits (23), Expect = 0.070 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 ttccccttccccttcgtcgccgcctccaccacctcttcctcct 243 ||||||||||||||| ||||| ||||| || |||| ||||||| Sbjct: 138648 ttccccttccccttcctcgcctcctcctcctcctcctcctcct 138606 Score = 46.1 bits (23), Expect = 0.070 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 ttccccttccccttcgtcgccgcctccaccacctcttcctcct 243 ||||||||||||||| ||||| ||||| || |||| ||||||| Sbjct: 138321 ttccccttccccttcctcgcctcctcctcctcctcctcctcct 138279
>ref|XM_512658.1| PREDICTED: Pan troglodytes similar to Fibrillarin (LOC456031), mRNA Length = 871 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 207 gcctccaccacctcttcctcct 186
>ref|XM_477240.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 tcttcctccttgccctcctcgccgtc 259 |||||||||| ||||||||||||||| Sbjct: 26 tcttcctcctcgccctcctcgccgtc 51
>gb|BT020144.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>ref|NM_001436.2| Homo sapiens fibrillarin (FBL), mRNA Length = 1135 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 248 gcctccaccacctcttcctcct 227
>gb|BC019260.1| Homo sapiens fibrillarin, mRNA (cDNA clone MGC:2347 IMAGE:3504198), complete cds Length = 1163 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 257 gcctccaccacctcttcctcct 236
>ref|XM_776937.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S26 (LOC576654), mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 218 cgccgcctccaccacctcttcctccttgcc 247 ||||||| |||||||||| ||||||||||| Sbjct: 454 cgccgccgccaccacctcctcctccttgcc 425
>emb|X56597.1|HSFIB Human humFib mRNA for fibrillarin Length = 1090 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 248 gcctccaccacctcttcctcct 227
>gb|AC131310.3| Homo sapiens chromosome 15, clone RP11-150C6, complete sequence Length = 168425 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcctt 244 |||||||||||||||||||||| Sbjct: 104805 cctccaccacctcttcctcctt 104826
>gb|BT007521.1| Synthetic construct Homo sapiens fibrillarin mRNA, partial cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>gb|BT006830.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>emb|CR622112.1| full-length cDNA clone CS0DC025YP09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1042 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 230 gcctccaccacctcttcctcct 209
>emb|CR621210.1| full-length cDNA clone CS0DC015YB15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1017 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 214 gcctccaccacctcttcctcct 193
>emb|CR619306.1| full-length cDNA clone CS0DB001YI10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1084 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 239 gcctccaccacctcttcctcct 218
>emb|CR611406.1| full-length cDNA clone CS0DC017YN11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1058 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 239 gcctccaccacctcttcctcct 218
>emb|CR608183.1| full-length cDNA clone CS0DK012YP18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1106 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 249 gcctccaccacctcttcctcct 228
>emb|CR592096.1| full-length cDNA clone CS0DC026YC19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1080 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 255 gcctccaccacctcttcctcct 234
>emb|CR457069.1| Homo sapiens full open reading frame cDNA clone RZPDo834F0511D for gene FBL, fibrillarin; complete cds, incl. stopcodon Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>gb|AC011224.8|AC011224 Homo sapiens, clone RP11-10K20, complete sequence Length = 164916 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcctt 244 |||||||||||||||||||||| Sbjct: 82932 cctccaccacctcttcctcctt 82911
>emb|CR377886.1| Pinus pinaster SSR, clone PPB3C02r Length = 514 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcctt 244 |||||||||||||||||||||| Sbjct: 41 cctccaccacctcttcctcctt 62
>emb|CR377885.1| Pinus pinaster SSR, clone PPB3C02 Length = 483 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcctt 244 |||||||||||||||||||||| Sbjct: 41 cctccaccacctcttcctcctt 62
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctcgccgtc 259 |||||||||| ||||||||||||||| Sbjct: 8098351 tcttcctcctcgccctcctcgccgtc 8098326 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 17351317 tcgtcgccgcctccaccacc 17351336
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ccttccccttcgtcgccgcctccacc 230 |||||||||||| ||||||||||||| Sbjct: 12274930 ccttccccttcgccgccgcctccacc 12274955
>gb|AC127511.7| Homo sapiens chromosome 15, clone RP13-188P24, complete sequence Length = 201949 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcctt 244 |||||||||||||||||||||| Sbjct: 109516 cctccaccacctcttcctcctt 109495
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ccttccccttcgtcgccgcctccacc 230 |||||||||||| ||||||||||||| Sbjct: 111952 ccttccccttcgccgccgcctccacc 111977
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctcgccgtc 259 |||||||||| ||||||||||||||| Sbjct: 32123 tcttcctcctcgccctcctcgccgtc 32098
>gb|AY892716.1| Synthetic construct Homo sapiens clone FLH024765.01L fibrillarin (FBL) mRNA, partial cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>gb|AY890230.1| Synthetic construct Homo sapiens clone FLH024770.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>gb|AY888436.1| Synthetic construct Homo sapiens clone FLH007298.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 189 gcctccaccacctcttcctcct 168
>gb|M59849.1|HUMFIBAA Human fibrillarin (Hfib1) mRNA, complete cds Length = 1104 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 gcctccaccacctcttcctcct 243 |||||||||||||||||||||| Sbjct: 217 gcctccaccacctcttcctcct 196
>ref|XM_483820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2982 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 2411 cgtcgccgcctccaccacctc 2391
>ref|XM_483819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4195 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 3629 cgtcgccgcctccaccacctc 3609
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 ccacctcttcctccttgccctcctcgccgtcgc 261 ||||||| ||||||| ||| ||||||||||||| Sbjct: 115711 ccacctcctcctcctcgccgtcctcgccgtcgc 115743
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctc 253 ||||||||||||||||||||| Sbjct: 90042 ctcttcctccttgccctcctc 90062
>gb|AC155240.2| Mus musculus BAC clone RP24-477K18 from chromosome 12, complete sequence Length = 146279 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 110985 cctccaccacctcttcctcct 110965
>gb|AY226088.1| Sycon sp. AR-2003 90-kDa heat-shock protein (hsp90) mRNA, partial cds Length = 1716 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctcg 254 ||||||||||||||||||||| Sbjct: 674 tcttcctccttgccctcctcg 654
>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence Length = 176407 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 159903 cctccaccacctcttcctcct 159883
>emb|CR394568.7| Zebrafish DNA sequence from clone CH211-253D5 in linkage group 21, complete sequence Length = 131341 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 atcctaacccctaccctgccc 144 ||||||||||||||||||||| Sbjct: 109809 atcctaacccctaccctgccc 109789
>gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome 12, complete sequence Length = 192581 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 187792 cctccaccacctcttcctcct 187812
>gb|AY372819.1| Sorghum bicolor P-glycoprotein 1 (PGP1) gene, PGP1-Dw3-T allele, complete cds Length = 6827 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 6343 cgtcgccgcctccaccacctc 6323
>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence Length = 236164 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 160042 cctccaccacctcttcctcct 160022
>emb|X59372.1|HSHOX4C Human HOX4C mRNA for a homeobox protein Length = 1133 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gccgcctccaccacctcttcctcct 243 ||||||||||||||||| ||||||| Sbjct: 523 gccgcctccaccacctcctcctcct 547
>ref|NM_001006918.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) (sfrs1), mRNA Length = 2055 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 cgccgcctccaccacctcttcctcc 242 |||||||||||||||||| |||||| Sbjct: 597 cgccgcctccaccacctcctcctcc 573
>gb|AC020907.6| Homo sapiens chromosome 19 clone CTD-2527I21, complete sequence Length = 169891 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctcgccg 257 |||||||||||| |||||||||||| Sbjct: 168615 ctcttcctccttcccctcctcgccg 168639
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 gcgcactgaatcccattcgct 27 ||||||||||||||||||||| Sbjct: 1097519 gcgcactgaatcccattcgct 1097499
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ggcgatcgccgtcgctgccctggcc 120 |||||||||||||||| |||||||| Sbjct: 592981 ggcgatcgccgtcgcttccctggcc 592957
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ccgcctccaccacctcttcctcctt 244 ||||| ||||||||||||||||||| Sbjct: 76370 ccgccaccaccacctcttcctcctt 76394
>gb|BC075558.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor), mRNA (cDNA clone MGC:89508 IMAGE:6992553), complete cds Length = 2055 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 cgccgcctccaccacctcttcctcc 242 |||||||||||||||||| |||||| Sbjct: 597 cgccgcctccaccacctcctcctcc 573
>emb|CR377979.1| Pinus pinaster SSR, clone PPB3E09 Length = 624 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 189 cctccaccacctcttcctcct 209 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcc 242 |||||||||||||||||||| Sbjct: 153 cctccaccacctcttcctcc 172
>emb|CR377918.1| Pinus pinaster SSR, clone PPB4A07 Length = 560 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 152 cctccaccacctcttcctcct 172 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcc 242 |||||||||||||||||||| Sbjct: 116 cctccaccacctcttcctcc 135
>emb|CR377914.1| Pinus pinaster SSR, clone PPB3H02 Length = 546 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 229 cctccaccacctcttcctcct 249
>emb|CR377638.1| Pinus pinaster SSR, clone PPA2B01r Length = 547 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 200 cctccaccacctcttcctcct 220
>emb|CR354486.1| Pinus pinaster SSR, clone PPA5B12 Length = 524 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cctccaccacctcttcctcct 243 ||||||||||||||||||||| Sbjct: 317 cctccaccacctcttcctcct 297
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ccgcctccaccacctcttcctcctt 244 ||||| ||||||||||||||||||| Sbjct: 3643529 ccgccaccaccacctcttcctcctt 3643553
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 tccccttcgtcgccgcctccaccac 232 |||||||| |||||||||||||||| Sbjct: 8836168 tccccttcctcgccgcctccaccac 8836144
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 28262111 cgtcgccgcctccaccacctc 28262091 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccccttccccttcgtcgccg 222 |||||||||||||||||||| Sbjct: 6754939 ccccttccccttcgtcgccg 6754920
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gccgcctccaccacctcttcctcct 243 ||||||||||||||||| ||||||| Sbjct: 107274 gccgcctccaccacctcctcctcct 107298
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccttgccctcctcgccgtcgc 261 ||||||||||||||||||||| Sbjct: 8949607 ccttgccctcctcgccgtcgc 8949587
>ref|NM_144779.1| Homo sapiens FXYD domain containing ion transport regulator 5 (FXYD5), transcript variant 1, mRNA Length = 1631 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctcgccg 257 |||||||||||| |||||||||||| Sbjct: 390 ctcttcctccttcccctcctcgccg 414
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ctcttcctccttgccctcctc 253 ||||||||||||||||||||| Sbjct: 4549 ctcttcctccttgccctcctc 4529
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgatcgccgtcgctgcc 114 ||||||||||||||||||||| Sbjct: 5810480 ccggcgatcgccgtcgctgcc 5810500
>dbj|AP005765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0023G13 Length = 144694 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 tccccttcgtcgccgcctccaccac 232 |||||||| |||||||||||||||| Sbjct: 104539 tccccttcctcgccgcctccaccac 104515
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 53926 cgtcgccgcctccaccacctc 53906
>dbj|AK121506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022P13, full insert sequence Length = 4194 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 3628 cgtcgccgcctccaccacctc 3608
>dbj|AK111869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045G11, full insert sequence Length = 2583 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 549 cgtcgccgcctccaccacctc 569
>dbj|AK111817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139P17, full insert sequence Length = 2982 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 2411 cgtcgccgcctccaccacctc 2391
>dbj|AK105923.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A06, full insert sequence Length = 1674 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 1124 cgtcgccgcctccaccacctc 1104
>dbj|AK073380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029I23, full insert sequence Length = 901 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 ccacctcttcctccttgccctcctcgccgtcgc 261 ||||||| ||||||| ||| ||||||||||||| Sbjct: 31 ccacctcctcctcctcgccgtcctcgccgtcgc 63
>gb|BC009642.2| Homo sapiens FXYD domain containing ion transport regulator 5, transcript variant 1, mRNA (cDNA clone MGC:17850 IMAGE:3900880), complete cds Length = 1271 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctcgccg 257 |||||||||||| |||||||||||| Sbjct: 10 ctcttcctccttcccctcctcgccg 34
>ref|NM_014213.2| Homo sapiens homeobox D9 (HOXD9), mRNA Length = 2089 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gccgcctccaccacctcttcctcct 243 ||||||||||||||||| ||||||| Sbjct: 926 gccgcctccaccacctcctcctcct 950
>gb|BC044855.1| Homo sapiens homeobox D9, mRNA (cDNA clone MGC:34365 IMAGE:5191006), complete cds Length = 1791 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gccgcctccaccacctcttcctcct 243 ||||||||||||||||| ||||||| Sbjct: 601 gccgcctccaccacctcctcctcct 625
>emb|AJ535058.1|OSA535058 Oryza sativa (japonica cultivar-group) mdr14 gene for MDR-like ABC transporter, exons 1-4 Length = 5239 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 cgtcgccgcctccaccacctc 235 ||||||||||||||||||||| Sbjct: 4795 cgtcgccgcctccaccacctc 4775
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ccgcctccaccacctcttcctcctt 244 ||||| ||||||||||||||||||| Sbjct: 3643450 ccgccaccaccacctcttcctcctt 3643474
>gb|BC018798.1| Homo sapiens FXYD domain containing ion transport regulator 5, transcript variant 1, mRNA (cDNA clone IMAGE:3504451) Length = 1638 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctcgccg 257 |||||||||||| |||||||||||| Sbjct: 341 ctcttcctccttcccctcctcgccg 365
>gb|AC002390.1|AC002390 Human DNA from overlapping chromosome 19-specific cosmids R30072 and R28588, genomic sequence, complete sequence Length = 70311 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ctcttcctccttgccctcctcgccg 257 |||||||||||| |||||||||||| Sbjct: 961 ctcttcctccttcccctcctcgccg 985
>emb|AL671888.8| Mouse DNA sequence from clone RP23-247O14 on chromosome X, complete sequence Length = 52491 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 caccacattccccttcccctt 214 ||||||||||||||||||||| Sbjct: 35686 caccacattccccttcccctt 35666
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ggcgatcgccgtcgctgccctggcc 120 |||||||||||||||| |||||||| Sbjct: 1027824 ggcgatcgccgtcgcttccctggcc 1027848
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 tccccttccccttcgtcgccgcctccac 229 ||||||||||||||||| || ||||||| Sbjct: 14010 tccccttccccttcgtcccctcctccac 13983
>ref|XM_474157.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ccaccacctcttcctccttgccctcctc 253 ||||||||||||||||||| | |||||| Sbjct: 97 ccaccacctcttcctccttcctctcctc 70
>ref|XM_468140.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cttcgtcgccgcctccacca 231 |||||||||||||||||||| Sbjct: 390 cttcgtcgccgcctccacca 409
>ref|XM_478085.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1192 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 248 tcgtcgccgcctccaccacc 267
>gb|BC073969.1| Homo sapiens neurofilament, heavy polypeptide 200kDa, mRNA (cDNA clone MGC:90283 IMAGE:6137962), complete cds Length = 3712 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 1493 tcttcctccttgccctcctc 1474
>ref|XM_954799.1| Neurospora crassa OR74A hypothetical protein (NCU02248.1) partial mRNA Length = 2880 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtcgccgcctccaccacctc 235 |||||||||||||||||||| Sbjct: 181 gtcgccgcctccaccacctc 200
>ref|XM_331023.1| Neurospora crassa OR74A hypothetical protein (NCU02248.1) partial mRNA Length = 2880 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtcgccgcctccaccacctc 235 |||||||||||||||||||| Sbjct: 181 gtcgccgcctccaccacctc 200
>gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosome 18, complete sequence Length = 189505 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccacattccccttccccttc 215 |||||||||||||||||||| Sbjct: 117596 ccacattccccttccccttc 117577
>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence Length = 221001 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 ccacctcttcctccttgccctcct 252 ||||||||||||||||| |||||| Sbjct: 150133 ccacctcttcctccttgtcctcct 150110
>gb|AC129302.3| Mus musculus BAC clone RP24-441C24 from chromosome 2, complete sequence Length = 186647 Score = 40.1 bits (20), Expect = 4.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 201 ttccccttccccttcgtcgccgcctccaccacctcttcctcctt 244 ||||||||||||||| || || ||||| || |||| |||||||| Sbjct: 168298 ttccccttccccttcctctccccctcctcctcctcctcctcctt 168255
>gb|AC108942.4| Mus musculus BAC clone RP23-7M11 from 18, complete sequence Length = 223041 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccaccacattccccttccc 211 |||||||||||||||||||| Sbjct: 45257 cccaccacattccccttccc 45238
>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part of the UTRN gene for utrophin (homologous to dystrophin) (DRP, DRP1, DMDL), a novel pseudogene similar to hypothetical protein HT023 and a novel pseudogene, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 tccaccacctcttcctccttgccctcct 252 |||||| |||||||||||||| |||||| Sbjct: 86598 tccacctcctcttcctccttgtcctcct 86625
>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the 5' end of the SH2D3C gene for SH2 domain containing 3C (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9 (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the FPGS gene for folylpolyglutamate synthase (folylpolyglutamate synthetase), the 3' end fo the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW, HHT1, ORW1, CD105), a novel gene and five CpG islands, complete sequence Length = 80642 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 accccatggcccaccacattcccc 206 |||||||||||||||||| ||||| Sbjct: 16533 accccatggcccaccacactcccc 16556
>emb|AL049812.14|HS1121H13 Human DNA sequence from clone RP5-1121H13 on chromosome 20q12 Contains a neurofilament heavy polypeptide 200kDa (NEFH) pseudogene, the 3' end of the PTPRT gene for protein tyrosine phosphatase receptor type T and a CpG island, complete sequence Length = 105946 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 18891 tcttcctccttgccctcctc 18910
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ccaccacctcttcctccttgccctcctc 253 ||||||||||||||||||| | |||||| Sbjct: 112866 ccaccacctcttcctccttcctctcctc 112839
>emb|AJ248283.1|CNSPAX01 Pyrococcus abyssi complete genome; segment 1/6 Length = 307150 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcttcctccttgccctcct 252 |||||||||||||||||||| Sbjct: 87828 ctcttcctccttgccctcct 87809
>ref|NM_021076.2| Homo sapiens neurofilament, heavy polypeptide 200kDa (NEFH), mRNA Length = 3695 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 1493 tcttcctccttgccctcctc 1474
>emb|BX465189.9| Zebrafish DNA sequence from clone RP71-47G15 in linkage group 23, complete sequence Length = 132715 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cgccgcctccaccacctctt 237 |||||||||||||||||||| Sbjct: 105614 cgccgcctccaccacctctt 105595
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 gccgcctccaccacctcttcctcc 242 ||||||||||||||||| |||||| Sbjct: 64128 gccgcctccaccacctcctcctcc 64151
>gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, complete sequence Length = 163590 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 aaagcaaacaagccatcaccaaac 64 ||||||||||||| |||||||||| Sbjct: 39814 aaagcaaacaagcaatcaccaaac 39791
>ref|XM_688132.1| PREDICTED: Danio rerio similar to retinoblastoma-associated factor 600 (LOC564802), mRNA Length = 1629 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cgccgcctccaccacctctt 237 |||||||||||||||||||| Sbjct: 1106 cgccgcctccaccacctctt 1125
>gb|AC000035.2| Homo sapiens Chromosome 22q12 Cosmid Clone ll47g11, complete sequence Length = 38429 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 27823 tcttcctccttgccctcctc 27804
>gb|AC005529.7| Homo sapiens chromosome 22 clone bk256d12 map 22q12, complete sequence Length = 318488 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 16993 tcttcctccttgccctcctc 16974
>gb|AC000025.2| Homo sapiens Chromosome 22q12 BAC Clone 566c1, complete sequence Length = 135405 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 55235 tcttcctccttgccctcctc 55216
>gb|AC005527.3| Homo sapiens 22q11 BAC Clone 489d1 In MDR Region, complete sequence Length = 149308 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 16769 tcttcctccttgccctcctc 16750
>emb|CR377459.1| Pinus pinaster SSR, clone PPA6A12 Length = 330 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctccaccacctcttcctcc 242 |||||||||||||||||||| Sbjct: 215 cctccaccacctcttcctcc 234
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ccaccacctcttcctccttgccctcctc 253 ||||||||||||||||||| | |||||| Sbjct: 33340605 ccaccacctcttcctccttcctctcctc 33340578
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cttcgtcgccgcctccacca 231 |||||||||||||||||||| Sbjct: 33315838 cttcgtcgccgcctccacca 33315857
>dbj|AB210851.1| Lemna gibba LgELF3 H1 mRNA for ELF3 homologue, complete cds Length = 1688 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 tcctcgccgtcgcatcaggt 268 |||||||||||||||||||| Sbjct: 434 tcctcgccgtcgcatcaggt 415
>gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N14, complete sequence Length = 172237 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tccaccacctcttcctcctt 244 |||||||||||||||||||| Sbjct: 65933 tccaccacctcttcctcctt 65914
>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence Length = 150467 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tccaccacctcttcctcctt 244 |||||||||||||||||||| Sbjct: 41829 tccaccacctcttcctcctt 41848
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 156442 tcgtcgccgcctccaccacc 156461
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 19541 tcgtcgccgcctccaccacc 19560
>emb|BX649422.2| Mouse DNA sequence from clone RP23-70A22 on chromosome 2, complete sequence Length = 66930 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ctccaccacctcttcctcct 243 |||||||||||||||||||| Sbjct: 31993 ctccaccacctcttcctcct 31974
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cttcgtcgccgcctccacca 231 |||||||||||||||||||| Sbjct: 145147 cttcgtcgccgcctccacca 145166
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cttcgtcgccgcctccacca 231 |||||||||||||||||||| Sbjct: 56588 cttcgtcgccgcctccacca 56607
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccccttccccttcgtcgccg 222 |||||||||||||||||||| Sbjct: 5658 ccccttccccttcgtcgccg 5639
>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0089L03 Length = 172106 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccccttccccttcgtcgccg 222 |||||||||||||||||||| Sbjct: 107341 ccccttccccttcgtcgccg 107322
>dbj|AK108177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A07, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 138 tcgtcgccgcctccaccacc 119
>emb|AJ322684.1|HSA322684 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OD9C Length = 904 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cccgacggcccacctcgcca 90 |||||||||||||||||||| Sbjct: 584 cccgacggcccacctcgcca 603
>gb|AF203032.1|AF203032 Homo sapiens neurofilament protein mRNA, complete cds Length = 3774 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 1460 tcttcctccttgccctcctc 1441
>dbj|AK069326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L02, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ccaccacctcttcctccttgccctcctc 253 ||||||||||||||||||| | |||||| Sbjct: 41 ccaccacctcttcctccttcctctcctc 14
>dbj|AK059441.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H07, full insert sequence Length = 881 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ccaccacctcttcctccttgccctcctc 253 ||||||||||||||||||| | |||||| Sbjct: 38 ccaccacctcttcctccttcctctcctc 11
>dbj|AK058326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B11, full insert sequence Length = 1192 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcgtcgccgcctccaccacc 233 |||||||||||||||||||| Sbjct: 248 tcgtcgccgcctccaccacc 267
>emb|X15309.1|HSNFH4 H.sapiens NF-H gene, exon 4 Length = 2542 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 252 tcttcctccttgccctcctc 233
>dbj|AB020652.2| Homo sapiens mRNA for KIAA0845 protein, partial cds Length = 3929 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tcttcctccttgccctcctc 253 |||||||||||||||||||| Sbjct: 1725 tcttcctccttgccctcctc 1706
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 acctcttcctccttgccctcctcg 254 ||||| |||||||||||||||||| Sbjct: 1486808 acctcatcctccttgccctcctcg 1486831
>emb|AL928739.5| Mouse DNA sequence from clone RP23-409L24 on chromosome 2, complete sequence Length = 153028 Score = 40.1 bits (20), Expect = 4.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 201 ttccccttccccttcgtcgccgcctccaccacctcttcctcctt 244 ||||||||||||||| || || ||||| || |||| |||||||| Sbjct: 64014 ttccccttccccttcctctccccctcctcctcctcctcctcctt 64057
>emb|AL645905.11| Mouse DNA sequence from clone RP23-19M18 on chromosome 11, complete sequence Length = 99317 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 cgccgcctccaccacctcttcctc 241 |||||||||||||||| ||||||| Sbjct: 55579 cgccgcctccaccaccgcttcctc 55556 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,692,907 Number of Sequences: 3902068 Number of extensions: 2692907 Number of successful extensions: 85122 Number of sequences better than 10.0: 184 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83904 Number of HSP's gapped (non-prelim): 1218 length of query: 328 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 306 effective length of database: 17,147,199,772 effective search space: 5247043130232 effective search space used: 5247043130232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
