ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TYRO_AGABI (O42713) Tyrosinase (EC 1.14.18.1) (Monophenol monoox... 30 1.9
2LNT_CHLCV (Q824Q5) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 29 3.3
3RS11_MYCPA (Q73S45) 30S ribosomal protein S11 29 3.3
4RL2_CHLTE (Q8KAH5) 50S ribosomal protein L2 28 4.3
5HSP70_SOYBN (P26413) Heat shock 70 kDa protein 28 7.3
6LEU3_MYCPA (Q73VI1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85... 28 7.3
7FAD25_MYCTU (Q50586) Putative fatty-acid--CoA ligase fadD25 (EC ... 27 9.5
8EMID1_MOUSE (Q91VF5) EMI domain-containing protein 1 precursor (... 27 9.5

>TYRO_AGABI (O42713) Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)|
           (Phenolase) (Monophenol oxidase) (Cresolase)
          Length = 556

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 174 FFLCLDPLLWTRSTTLDREKMLWSA 100
           FF   DP+ W   T +DR   LW A
Sbjct: 270 FFAAFDPIFWLHHTNVDRLLSLWKA 294



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>LNT_CHLCV (Q824Q5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 541

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 115 FFPVKGGAASPKQGIQTQEKEPPSAPHCSFLALVSLLYLFDLVPCDCHFS 264
           FF + G A     G+     EP  +P  S+  L SLL+L+ +     HFS
Sbjct: 24  FFSLLGSAVG--YGLLWYSLEPQKSPKLSWRQLTSLLFLWSVTVYGVHFS 71



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>RS11_MYCPA (Q73S45) 30S ribosomal protein S11|
          Length = 138

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 121 PVKGGAASPKQGIQTQEKEPPSAPH 195
           P K  AA+PK+G +T+ +E  + PH
Sbjct: 3   PAKKAAAAPKKGQKTRRREKKNVPH 27



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>RL2_CHLTE (Q8KAH5) 50S ribosomal protein L2|
          Length = 279

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = -2

Query: 262 RNGNHMELDRISKEARPKQGSCSAVH*EALFPVSGSLALDSQHHP*QGKNALVGIKRQSR 83
           R GN+  L   S E R  +  C A        V G+   ++      G++  +GI+ Q+R
Sbjct: 167 REGNYATLKMPSGEIRKVRIECRAT-----IGVIGNAEHENISLGKAGRSRWLGIRPQTR 221

Query: 82  GISSSPGDH 56
           G++ +P DH
Sbjct: 222 GMAMNPVDH 230



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>HSP70_SOYBN (P26413) Heat shock 70 kDa protein|
          Length = 645

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 277 DAVQWRNGNHM-ELDRISKEARPKQGSCSAV 188
           DA+QW  GN M E+D    + +  +G C+ +
Sbjct: 581 DAIQWLEGNQMAEVDEFEDKQKELEGICNPI 611



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>LEU3_MYCPA (Q73VI1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 336

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 101 ADQSIFSLSRVVLRVQSKGSRHRKKSLLVHR----TAASLLWSR 220
           +  + F + RVV+    +  R RK   LVH+    T A  LWSR
Sbjct: 148 SQNTAFGVRRVVVDAFERARRRRKHLTLVHKTNVLTFAGKLWSR 191



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>FAD25_MYCTU (Q50586) Putative fatty-acid--CoA ligase fadD25 (EC 6.2.1.-)|
           (Acyl-CoA synthetase)
          Length = 583

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 247 MELDRISKEARPKQGSCSAVH 185
           +E+DR+  +ARP  GS SA H
Sbjct: 144 IEVDRLDLDARPSSGSRSAAH 164



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>EMID1_MOUSE (Q91VF5) EMI domain-containing protein 1 precursor (Protein Emu1)|
           (Emilin and multimerin domain-containing protein 1)
          Length = 444

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -1

Query: 152 CFGLAAPPLTGKKCFGRHQKAVPRHLFLTWRSWCEEKVTQVAS*HMSKGT 3
           C GL  P        G    +VP   F   R+WC   VT+  S H+  GT
Sbjct: 11  CLGLLLPG-------GGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGT 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,896,090
Number of Sequences: 219361
Number of extensions: 964488
Number of successful extensions: 2612
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2607
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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