ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl16e06 |
|---|---|
| Clone Library Name | barley_pub |
>SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 51.2 bits (121), Expect = 6e-07 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 9/68 (13%) Frame = +2 Query: 173 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 325 RG VK V SG +++ G + PPE+ I LS + A LARR V DEP+A+ Sbjct: 21 RGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWAF 80 Query: 326 ESKEFLRK 349 ++EFLRK Sbjct: 81 PAREFLRK 88
>SND1_MOUSE (Q78PY7) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 50.8 bits (120), Expect = 8e-07 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%) Frame = +2 Query: 134 AIMASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR 295 A A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LAR Sbjct: 2 ASSAQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLAR 61 Query: 296 RGGV---------DEPFAWESKEFLRK 349 R DEP+A+ ++EFLRK Sbjct: 62 RAAATQPDGKDTPDEPWAFPAREFLRK 88
>SND1_RAT (Q66X93) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (SND p102) (p105 coactivator) Length = 909 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 15/84 (17%) Frame = +2 Query: 143 ASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGG 304 A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 4 AQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAA 63 Query: 305 V---------DEPFAWESKEFLRK 349 DEP+A+ ++EFLRK Sbjct: 64 ATQPDGKDTPDEPWAFPAREFLRK 87
>SND1_BRARE (Q7ZT42) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (4SNc-Tudor domain protein) Length = 897 Score = 50.1 bits (118), Expect = 1e-06 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 9/80 (11%) Frame = +2 Query: 137 IMASNTGASGWLRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRG----- 301 + +S A RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 9 VQSSQASAPQLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALARRAIQGQP 68 Query: 302 ----GVDEPFAWESKEFLRK 349 DEP+A++++EF+RK Sbjct: 69 DTKDTPDEPWAFQAREFMRK 88
>SND1_HUMAN (Q7KZF4) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (EBNA2 coactivator p100) Length = 910 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 9/68 (13%) Frame = +2 Query: 173 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 325 RG +K V SG +++ G + PPE+ I LS + A LARR DEP+A+ Sbjct: 21 RGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWAF 80 Query: 326 ESKEFLRK 349 ++EFLRK Sbjct: 81 PAREFLRK 88
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 29.6 bits (65), Expect = 1.9 Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 2/111 (1%) Frame = -1 Query: 348 FLRNSLLSQANGSSTPPRRA-SLGAIRYDRVMDFSGGISALVLPMMRRQSPEVTAFTLPL 172 FL +SLLS A + PP S R R S S+ + P RR T F L Sbjct: 318 FLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLE 377 Query: 171 SH-PEAPVFDAMIAPWDWPAASGLRLPIRDPGEGVWPAG*SLLSRPDPDPN 22 P+ P AP P LP +P + + P+ SLL P P P+ Sbjct: 378 GRGPQTPRRSRPRAPA--PVPQPFSLP--EPSQPILPSVLSLLGLPTPGPS 424
>HISX_BRAJA (P59397) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 431 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +2 Query: 110 LAAGQSQGAIMASNTGASGWLRGKVKAV----TSGDCLLIMGSTKAEIPPEKSITLSYLM 277 + AG S+ ++A +TG + W+ + A TS +LI S + EK++ Sbjct: 232 MIAGPSEVLVIADDTGNADWIAADLLAQAEHDTSAQSILITDSARLAADVEKAVEAQLKT 291 Query: 278 APRLA 292 PR A Sbjct: 292 LPRTA 296
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 Query: 24 SDRDQGEREEISQPAKPPLPDLGSEGGGRSPP 119 +DRD GE E S A+PP D+G+ GG S P Sbjct: 1726 TDRDGGEAGESS--AEPPPSDMGTVGGQASHP 1755
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 113 AAG--QSQGAIMASNTGASGWLRGKVKAVTSGDCLLIMGS 226 AAG +S+GA + G RG K+ T+GDC GS Sbjct: 66 AAGGAESRGAALGGAADGEGPARGAAKSSTNGDCRRFRGS 105
>CRTE_RHOCA (P17060) Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)| (GGPP synthetase) (Farnesyltranstransferase) Length = 289 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = +2 Query: 188 AVTSGDCLLIMG----STKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESK 334 AV +GD LLI G + + P++++ L + RGG+ AWES+ Sbjct: 106 AVLAGDSLLIRGFEVLADVGAVNPDRALKLISKLGQLSGARGGICAGQAWESE 158
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 42 EREEISQPAKPPLPDLGSEGGGRSPPANPKVLS-WHRTQELQ 164 +R+ +S+P P GGGR PP +P++ + HRTQ Q Sbjct: 287 QRQTLSRPPIPRRGPFSEAGGGR-PPRSPQLRTPEHRTQSTQ 327
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 28.5 bits (62), Expect = 4.3 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -1 Query: 321 ANGSSTPPRRASLGAIRYDRVMDFSGG----ISALVLPMMRRQSPEVTAFTLPLSHPEAP 154 A G ++P +RASL D +GG +++L +PM QSP+ T + P AP Sbjct: 78 APGLASPTQRASL--FHSDPFAPGAGGGALPVASLAVPMDASQSPDSTPAPATPAAPAAP 135 Query: 153 VFDAMIAPWDWPAASG 106 A AP+ SG Sbjct: 136 A--APAAPFSSLGGSG 149
>ATKC_RHILO (Q98GX7) Potassium-transporting ATPase C chain (EC 3.6.3.12)| (Potassium-translocating ATPase C chain) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) Length = 187 Score = 23.9 bits (50), Expect(2) = 4.8 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +2 Query: 239 IPPEKSITLSYLMAPRLARRGGVDE 313 + P+ S +Y PR+A+ G+DE Sbjct: 126 LDPQISPEAAYFQVPRVAKARGIDE 150 Score = 23.1 bits (48), Expect(2) = 4.8 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 Query: 84 DLGSEGGGRSPPANPKVL 137 D G+ GG P NPK++ Sbjct: 78 DAGASGGSNLGPTNPKLI 95
>OTCC_HAEIN (P44770) Ornithine carbamoyltransferase, catabolic (EC 2.1.3.3)| (OTCase) Length = 334 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +1 Query: 79 SRISDRKAEAARRRPIPRCYHGIEHRSFRMAKGQGEGCDFWGLPSHHG 222 S+I +++ R + R Y GIE+R F+ + Q E D+ G+P +G Sbjct: 83 SQIGHKESMKDTARVLGRMYDGIEYRGFKQSIVQ-ELADYAGVPVFNG 129
>KCNN2_RAT (P70604) Small conductance calcium-activated potassium channel| protein 2 (SK2) Length = 580 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 15 LHHSDRDQGEREEISQPAKPPLPDLGSEGGGRSPPA 122 L S R+ E + +QP +PP +G GG SP A Sbjct: 17 LSSSRRNLHEMDSEAQPLQPPASVVGGGGGASSPSA 52
>MACF4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, isoform 4| Length = 5938 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 39 GEREEISQPAKPPLPDLGSEGGGRSPPANPKVLSWHR 149 G R+ +SQP PP+P L S+ ++P N W + Sbjct: 5507 GGRKSLSQPTPPPMPIL-SQSEAKNPRINQLSARWQQ 5542
>KCNN2_MOUSE (P58390) Small conductance calcium-activated potassium channel| protein 2 (SK2) Length = 574 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 15 LHHSDRDQGEREEISQPAKPPLPDLGSEGGGRSPPA 122 L S R+ E + +QP +PP +G GG SP A Sbjct: 17 LSSSRRNLQEMDSEAQPLQPPASVVGGGGGASSPSA 52
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 28.1 bits (61), Expect = 5.6 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Frame = +1 Query: 31 GIRAREKRSASRPNPLSRISDRKAEAARRRPIPRCYHGIEHRSFRMAKGQGEGCDFW-GL 207 G + RE+R RP I ++ E+ ++ P + R R +GEG W G+ Sbjct: 226 GEKPREQREGPRPEQGPDIPGQQEESPQQEPSSERGDSVGEREARSPGHEGEGGGEWPGI 285 Query: 208 PSHHGEHQGRDPAREVHHSVIPYGPKAGSSWW 303 E G A +P G G+ W Sbjct: 286 SGERRESPGEWGAD------VPRGRGEGAGEW 311
>MACF1_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, isoforms 1/2/3/5| (Actin cross-linking family protein 7) (Macrophin-1) (Trabeculin-alpha) (620 kDa actin-binding protein) (ABP620) Length = 5430 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 39 GEREEISQPAKPPLPDLGSEGGGRSPPANPKVLSWHR 149 G R+ +SQP PP+P L S+ ++P N W + Sbjct: 5005 GGRKSLSQPTPPPMPIL-SQSEAKNPRINQLSARWQQ 5040
>SOCS1_HUMAN (O15524) Suppressor of cytokine signaling 1 (SOCS-1) (JAK-binding| protein) (JAB) (STAT-induced STAT inhibitor 1) (SSI-1) (Tec-interacting protein 3) (TIP-3) Length = 211 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Frame = +1 Query: 64 RPNPLSRISDRKAEAARRRPIP------------RCYHG-IEHRSFRMAKGQGEGCDF-W 201 RP P S S A AR RP P R + ++R A + C F W Sbjct: 22 RPEPSSSSSSSPAAPARPRPCPAVPAPAPGDTHFRTFRSHADYRRITRASALLDACGFYW 81 Query: 202 GLPSHHGEHQ 231 G S HG H+ Sbjct: 82 GPLSVHGAHE 91
>SATB1_MOUSE (Q60611) DNA-binding protein SATB1 (Special AT-rich| sequence-binding protein 1) Length = 764 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +3 Query: 30 RDQGEREEISQPAKPPLPDLGSEGGGRSPPANPKVLSWHRTQE 158 + Q ++++ P PP P + G R PP P V S + E Sbjct: 598 QQQQQQQQQQPPPPPPQPQPQPQAGPRLPPRQPTVASSAESDE 640
>CDC73_CHICK (Q5ZLM0) Parafibromin (Cell division cycle protein 73 homolog)| Length = 531 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/63 (23%), Positives = 28/63 (44%) Frame = +1 Query: 34 IRAREKRSASRPNPLSRISDRKAEAARRRPIPRCYHGIEHRSFRMAKGQGEGCDFWGLPS 213 ++ARE+ A P + ++PIP Y+ + F+ K + EG + + Sbjct: 256 VKAREEGRAPEQRPAPNTAPTDPTLRNKQPIPAAYNRYDQERFK-GKEETEGFKIDTMGT 314 Query: 214 HHG 222 +HG Sbjct: 315 YHG 317
>MYCB2_MOUSE (Q7TPH6) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4711 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -1 Query: 111 SGLRLPIRDPGEGVWPAG*SLLS-RPDPDPN 22 +GL + ++DP +G+ P G L+ + DP PN Sbjct: 2393 AGLEVKVKDPPKGMIPPGTQLVKPKADPQPN 2423
>LPRF_MYCTU (P65314) Putative lipoprotein lprF precursor| Length = 261 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 339 NSLLSQANGSSTPPRRASLGAI 274 N L+SQA GS P R +SLGA+ Sbjct: 2 NGLISQACGSHRPRRPSSLGAV 23
>LPRF_MYCBO (P65315) Putative lipoprotein lprF precursor| Length = 261 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 339 NSLLSQANGSSTPPRRASLGAI 274 N L+SQA GS P R +SLGA+ Sbjct: 2 NGLISQACGSHRPRRPSSLGAV 23
>UL49_HHV11 (P10233) Tegument protein UL49| Length = 301 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 Query: 63 PAKPPLPDLGSEGGGRSPPANPK 131 PA+ P P GS G GR+P P+ Sbjct: 98 PARAPPPPAGSGGAGRTPTTAPR 120
>AMYH_SACDI (P04065) Glucoamylase S1 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAI) Length = 767 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 319 KWLIDSTTTSQPWGHKV*QSDGLLWRDLCL 230 KW +D+T ++PWG Q+DG R + + Sbjct: 443 KWNVDNTAFTEPWGRP--QNDGPALRSIAI 470
>COBQ_MYCTU (P0A532) Cobyric acid synthase| Length = 494 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 151 HRSFRMAKGQGEGCDFWGLPSHHGEHQGRDPAREVHHSVIPYGPKAGSSW 300 H+ R+ +G+G G G HHG D A E GP G+ W Sbjct: 375 HKVLRLPRGEGLGVPASGYEIHHGRITRGDTAEEFLGGARD-GPVFGTMW 423
>COBQ_MYCBO (P0A533) Cobyric acid synthase| Length = 494 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 151 HRSFRMAKGQGEGCDFWGLPSHHGEHQGRDPAREVHHSVIPYGPKAGSSW 300 H+ R+ +G+G G G HHG D A E GP G+ W Sbjct: 375 HKVLRLPRGEGLGVPASGYEIHHGRITRGDTAEEFLGGARD-GPVFGTMW 423
>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)| (Triacylglycerol lipase) Length = 684 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Frame = +3 Query: 18 HH--SDRDQGEREEISQPAKPPLPDL-----GSEGGGRSPPANPKVLSWHRTQELQD 167 HH + RD G+RE + A P L DL G EGG ++ +W R D Sbjct: 452 HHLSARRDLGQRERLRPGAGPDLEDLCRHAGGQEGGAGGDRSSAARRAWLRLSGSMD 508
>AMYI_SACDI (P29760) Glucoamylase S2 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAII) Length = 768 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 319 KWLIDSTTTSQPWGHKV*QSDGLLWRDLCL 230 KW +D+T ++PWG Q+DG R + + Sbjct: 444 KWNVDNTAFTEPWGRP--QNDGPALRSIAI 471
>DPOLA_ARATH (Q9FHA3) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1492 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +3 Query: 33 DQGEREEISQPAKPPLPDLGSEGGGRSPPANPKVLSWHRTQELQ 164 D+GE E+ S+P+ P D +GG S K +TQ+ Q Sbjct: 90 DEGEEEDWSKPSGPESTDESDDGGRFSGRLKKKKKGKEQTQQPQ 133
>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking| family 7) Length = 5327 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +3 Query: 39 GEREEISQPAKPPLPDLGSEGGGRSPPANPKVLSWHR 149 G R+ ++QP PP+P L S+ ++P N W + Sbjct: 4892 GSRKSLNQPTPPPMPIL-SQSEAKNPRINQLSARWQQ 4927
>PFA5_YARLI (Q6C7D1) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty| acyltransferase 5) Length = 334 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +1 Query: 190 CDFWGLPSHHGEHQGRDPAREVHHSVI 270 CD WG+P E Q P R HHS I Sbjct: 113 CDGWGMPKWCSECQTHKPDR-THHSAI 138
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = +3 Query: 36 QGEREEISQPAKPPLPDLGSEGGGRSP-----PANPKVLSWHRT 152 QGE + A P LP SEG G SP P P+ W T Sbjct: 360 QGEHLSDQENAPPILPGRPSEGLGPSPHLVPHPGGPEAEVWEET 403
>SATB1_HUMAN (Q01826) DNA-binding protein SATB1 (Special AT-rich| sequence-binding protein 1) Length = 763 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = +3 Query: 15 LHHSDRDQGEREEISQPAKPPLPDLGSEGGGRSPPANPKVLS 140 + + Q ++++ Q PP P + G R PP P V S Sbjct: 592 IQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVAS 633
>Y10K_HBVYW (P03163) Hypothetical 10.4 kDa protein| Length = 95 Score = 27.3 bits (59), Expect = 9.5 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Frame = +1 Query: 112 RRRPIPRCYHGIEHRSFRMAKGQGEGCDFWGLPSHHGEHQGR---DPAREVHHSVIPYGP 282 RR + R HG + + E C W + + GE R DP + P G Sbjct: 2 RRAEVKRSAHGPADEKAQTGSPRKERCAPWSVGTADGEGDERVPSDPEKGRPQDSAPTGR 61 Query: 283 K-----AGSSW 300 K AGSSW Sbjct: 62 KQRTSRAGSSW 72
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = +3 Query: 63 PAKPPLPDL--GSEGGGRSPPANPKVLS 140 PA PP P G+ GGG PPA P++ + Sbjct: 556 PAPPPPPPSFGGAAGGGPPPPAPPQMFN 583
>TRPS1_XENLA (Q90ZS6) Zinc finger transcription factor Trps1| Length = 1271 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = +1 Query: 49 KRSASRPNPLSRISDRKAEAARRRPIPRCYHGIEHRSFRMAKGQGEGCDF--WGLPSHHG 222 + S+ P S +SD K + R PI + I+H ++ E + +GLP H Sbjct: 1033 QESSGEPGNSSSVSDGKGSSERGSPIEKYMRPIKHPNYSPPGSPIEKYQYPLFGLPFVHN 1092 Query: 223 EHQ 231 + Q Sbjct: 1093 DFQ 1095
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Frame = +3 Query: 21 HSDRDQGEREEISQPAKPPLPDLGSEGG-------GRSPPANPKV 134 H D+ E ++ PAKPP+P +G G GR P KV Sbjct: 4258 HDTEDETETRQLP-PAKPPIPTVGRPPGRGGSAKRGRQPRGAKKV 4301
>RIBD2_BUCAI (P57534) 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC| 1.1.1.193) (HTP reductase) Length = 207 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 349 FPQKLLAFPSKWLIDSTTTSQPWGHKV*QSDGLLW 245 FP K+ P + +IDS QP H + ++ G +W Sbjct: 57 FPNKIFQHPIRVIIDSKNRVQP-SHNIIKTKGKIW 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,190,291 Number of Sequences: 219361 Number of extensions: 1224234 Number of successful extensions: 4468 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4455 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
